RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 HAUS7Q99871 368 aa15.67■□□□□ 0.1
SMC6-201ENST00000351948 CALML3P27482 149 aa15.67■□□□□ 0.1
SMC6-201ENST00000351948 TCP10L2B9ZVM9 353 aa15.67■□□□□ 0.1
SMC6-201ENST00000351948 USP8P40818 1118 aa15.67■□□□□ 0.1
SMC6-201ENST00000351948 TMC6Q7Z403 805 aa15.67■□□□□ 0.1
SMC6-201ENST00000351948 LUC7LQ9NQ29 371 aaKnown RBP15.67■□□□□ 0.1
SMC6-201ENST00000351948 TRMT1Q9NXH9 659 aaKnown RBP15.67■□□□□ 0.1
SMC6-201ENST00000351948 TBCAO75347 108 aaKnown RBP15.66■□□□□ 0.1
SMC6-201ENST00000351948 IGKV5-2P06315 115 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 PPP4R3BQ5MIZ7 849 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 TMEM87BQ96K49 555 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 TRIM47Q96LD4 638 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 MMP10P09238 476 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 HSPD1P10809 573 aaKnown RBP15.66■□□□□ 0.1
SMC6-201ENST00000351948 HSPA4P34932 840 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 ASIC1P78348 528 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 TEKT1Q969V4 418 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 DNAJC25Q9H1X3 360 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 EXOC1Q9NV70 894 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 THRAP3Q9Y2W1 955 aaKnown RBP15.66■□□□□ 0.1
SMC6-201ENST00000351948 VWA3AA6NCI4 1184 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 ESPNB1AK53 854 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 HSPA1LP34931 641 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 PTPN12Q05209 780 aaKnown RBP15.66■□□□□ 0.1
SMC6-201ENST00000351948 PPARAQ07869 468 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 ANO6Q4KMQ2 910 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 INO80Q9ULG1 1556 aaPredicted RBP15.66■□□□□ 0.1
SMC6-201ENST00000351948 A0A1B0GVL5 298 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 CCP110O43303 1012 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 SLC1A4P43007 532 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 TDRD12Q587J7 1177 aaKnown RBP15.66■□□□□ 0.1
SMC6-201ENST00000351948 JAKMIP3Q5VZ66 844 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 PIK3AP1Q6ZUJ8 805 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 TBC1D22AQ8WUA7 517 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 PICK1Q9NRD5 415 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 HOMER2Q9NSB8 354 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 KCNJ14Q9UNX9 436 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 MAST3O60307 1309 aa15.66■□□□□ 0.1
SMC6-201ENST00000351948 ADCY5O95622 1261 aa15.65■□□□□ 0.1
SMC6-201ENST00000351948 USH1GQ495M9 461 aa15.65■□□□□ 0.1
SMC6-201ENST00000351948 SPECC1Q5M775 1068 aa15.65■□□□□ 0.1
SMC6-201ENST00000351948 CCDC181Q5TID7 509 aa15.65■□□□□ 0.1
SMC6-201ENST00000351948 ARGLU1Q9NWB6 273 aaPredicted RBP15.65■□□□□ 0.1
SMC6-201ENST00000351948 PATL2C9JE40 543 aaKnown RBP15.65■□□□□ 0.1
SMC6-201ENST00000351948 FGAP02671 866 aa15.65■□□□□ 0.1
SMC6-201ENST00000351948 IFNL3Q8IZI9 196 aa15.65■□□□□ 0.1
SMC6-201ENST00000351948 GNA11P29992 359 aa15.65■□□□□ 0.1
SMC6-201ENST00000351948 SUPT20HQ8NEM7 779 aa15.65■□□□□ 0.1
SMC6-201ENST00000351948 QRICH2Q9H0J4 1663 aa15.65■□□□□ 0.1
SMC6-201ENST00000351948 KIDINS220Q9ULH0 1771 aa15.65■□□□□ 0.1
SMC6-201ENST00000351948 ATP2B4P23634 1241 aa15.65■□□□□ 0.1
SMC6-201ENST00000351948 AKNAD1Q5T1N1 836 aa15.65■□□□□ 0.1
SMC6-201ENST00000351948 ZNF397Q8NF99 534 aaPredicted RBP15.65■□□□□ 0.1
SMC6-201ENST00000351948 ERMNQ8TAM6 284 aa15.65■□□□□ 0.1
SMC6-201ENST00000351948 PPEF1O14829 653 aaPredicted RBP15.64■□□□□ 0.1
SMC6-201ENST00000351948 STX17P56962 302 aa15.64■□□□□ 0.1
SMC6-201ENST00000351948 LMTK2Q8IWU2 1503 aa15.64■□□□□ 0.09
SMC6-201ENST00000351948 ADAMTS13Q76LX8 1427 aa15.64■□□□□ 0.09
SMC6-201ENST00000351948 BICD1Q96G01 975 aa15.64■□□□□ 0.09
SMC6-201ENST00000351948 INTS4Q96HW7 963 aaKnown RBP15.64■□□□□ 0.09
SMC6-201ENST00000351948 BTDP43251 543 aa15.64■□□□□ 0.09
SMC6-201ENST00000351948 CPSF1Q10570 1443 aaKnown RBP15.64■□□□□ 0.09
SMC6-201ENST00000351948 DIS3L2Q8IYB7 885 aaKnown RBP15.64■□□□□ 0.09
SMC6-201ENST00000351948 CCDC112Q8NEF3 446 aa15.64■□□□□ 0.09
SMC6-201ENST00000351948 CLRN2A0PK11 232 aa15.63■□□□□ 0.09
SMC6-201ENST00000351948 CHMP2AO43633 222 aa15.63■□□□□ 0.09
SMC6-201ENST00000351948 TTLL11Q8NHH1 800 aa15.63■□□□□ 0.09
SMC6-201ENST00000351948 CERKQ8TCT0 537 aa15.63■□□□□ 0.09
SMC6-201ENST00000351948 CNKSR1Q969H4 720 aa15.63■□□□□ 0.09
SMC6-201ENST00000351948 VTI1AQ96AJ9 217 aa15.63■□□□□ 0.09
SMC6-201ENST00000351948 RBM28Q9NW13 759 aaKnown RBP15.63■□□□□ 0.09
SMC6-201ENST00000351948 SASH1O94885 1247 aa15.63■□□□□ 0.09
SMC6-201ENST00000351948 ZNF589Q86UQ0 364 aaPredicted RBP15.63■□□□□ 0.09
SMC6-201ENST00000351948 GJD4Q96KN9 370 aaPredicted RBP15.63■□□□□ 0.09
SMC6-201ENST00000351948 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.63■□□□□ 0.09
SMC6-201ENST00000351948 DYNLL1P63167 89 aaKnown RBP15.63■□□□□ 0.09
SMC6-201ENST00000351948 ME3Q16798 604 aa15.63■□□□□ 0.09
SMC6-201ENST00000351948 KANK3Q6NY19 840 aa15.63■□□□□ 0.09
SMC6-201ENST00000351948 DSCC1Q9BVC3 393 aa15.63■□□□□ 0.09
SMC6-201ENST00000351948 PTPRMP28827 1452 aa15.62■□□□□ 0.09
SMC6-201ENST00000351948 BMP15O95972 392 aa15.62■□□□□ 0.09
SMC6-201ENST00000351948 RBM10P98175 930 aaKnown RBP15.62■□□□□ 0.09
SMC6-201ENST00000351948 SLFNL1Q499Z3 407 aa15.62■□□□□ 0.09
SMC6-201ENST00000351948 KRT79Q5XKE5 535 aa15.62■□□□□ 0.09
SMC6-201ENST00000351948 ARHGEF40Q8TER5 1519 aa15.62■□□□□ 0.09
SMC6-201ENST00000351948 N4BP3O15049 544 aa15.62■□□□□ 0.09
SMC6-201ENST00000351948 KIF20AO95235 890 aa15.62■□□□□ 0.09
SMC6-201ENST00000351948 GOLGA8HP0CJ92 632 aa15.62■□□□□ 0.09
SMC6-201ENST00000351948 ARHGEF10LQ9HCE6 1279 aa15.62■□□□□ 0.09
SMC6-201ENST00000351948 VPS54Q9P1Q0 977 aa15.62■□□□□ 0.09
SMC6-201ENST00000351948 XDHP47989 1333 aa15.62■□□□□ 0.09
SMC6-201ENST00000351948 AOPEPQ8N6M6 819 aa15.62■□□□□ 0.09
SMC6-201ENST00000351948 PIK3C2BO00750 1634 aa15.62■□□□□ 0.09
SMC6-201ENST00000351948 DEXIO95424 95 aa15.62■□□□□ 0.09
SMC6-201ENST00000351948 TNNT1P13805 278 aa15.62■□□□□ 0.09
SMC6-201ENST00000351948 UBE4AQ14139 1066 aa15.62■□□□□ 0.09
SMC6-201ENST00000351948 DTHD1Q6ZMT9 781 aa15.62■□□□□ 0.09
SMC6-201ENST00000351948 ERVV-1B6SEH8 477 aa15.61■□□□□ 0.09
SMC6-201ENST00000351948 RAD17O75943 681 aa15.61■□□□□ 0.09
SMC6-201ENST00000351948 TRAF1Q13077 416 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms