RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 IGDCC4Q8TDY8 1250 aa19.54■□□□□ 0.72
SAMM50-201ENST00000350028 STAG1Q8WVM7 1258 aa19.54■□□□□ 0.72
SAMM50-201ENST00000350028 MTA3Q9BTC8 594 aa19.54■□□□□ 0.72
SAMM50-201ENST00000350028 ORC3Q9UBD5 711 aaPredicted RBP19.54■□□□□ 0.72
SAMM50-201ENST00000350028 RCOR1Q9UKL0 485 aa19.54■□□□□ 0.72
SAMM50-201ENST00000350028 C4AP0C0L4 1744 aa19.53■□□□□ 0.72
SAMM50-201ENST00000350028 NEDD4P46934 1319 aa19.53■□□□□ 0.72
SAMM50-201ENST00000350028 MAGEB6P1A0A0J9YX57 407 aa19.53■□□□□ 0.72
SAMM50-201ENST00000350028 CDKL5O76039 1030 aa19.53■□□□□ 0.72
SAMM50-201ENST00000350028 ADRA2BP18089 450 aa19.53■□□□□ 0.72
SAMM50-201ENST00000350028 LIFRP42702 1097 aa19.53■□□□□ 0.72
SAMM50-201ENST00000350028 FOSBP53539 338 aa19.53■□□□□ 0.72
SAMM50-201ENST00000350028 CTDSPL2Q05D32 466 aa19.53■□□□□ 0.72
SAMM50-201ENST00000350028 CPLX2Q6PUV4 134 aaKnown RBP19.53■□□□□ 0.72
SAMM50-201ENST00000350028 MFSD6Q6ZSS7 791 aa19.53■□□□□ 0.72
SAMM50-201ENST00000350028 SGMS1Q86VZ5 419 aa19.53■□□□□ 0.72
SAMM50-201ENST00000350028 DDX19AQ9NUU7 478 aaKnown RBP19.53■□□□□ 0.72
SAMM50-201ENST00000350028 LIG1P18858 919 aa19.52■□□□□ 0.72
SAMM50-201ENST00000350028 TM4SF1P30408 202 aa19.52■□□□□ 0.72
SAMM50-201ENST00000350028 RNF214Q8ND24 703 aa19.52■□□□□ 0.72
SAMM50-201ENST00000350028 C8orf76Q96K31 380 aa19.52■□□□□ 0.72
SAMM50-201ENST00000350028 FUCA2Q9BTY2 467 aa19.52■□□□□ 0.72
SAMM50-201ENST00000350028 RNF41Q9H4P4 317 aaPredicted RBP19.52■□□□□ 0.72
SAMM50-201ENST00000350028 METAP2P50579 478 aaKnown RBP eCLIP19.51■□□□□ 0.71
SAMM50-201ENST00000350028 TMEM67Q5HYA8 995 aa19.51■□□□□ 0.71
SAMM50-201ENST00000350028 APOA5Q6Q788 366 aa19.51■□□□□ 0.71
SAMM50-201ENST00000350028 AMIGO3Q86WK7 504 aa19.51■□□□□ 0.71
SAMM50-201ENST00000350028 MIGA1Q8NAN2 632 aa19.51■□□□□ 0.71
SAMM50-201ENST00000350028 PGBD1Q96JS3 809 aa19.51■□□□□ 0.71
SAMM50-201ENST00000350028 NUP62CLQ9H1M0 184 aa19.51■□□□□ 0.71
SAMM50-201ENST00000350028 RRAGDQ9NQL2 400 aaPredicted RBP19.51■□□□□ 0.71
SAMM50-201ENST00000350028 COL1A1P02452 1464 aaPredicted RBP19.51■□□□□ 0.71
SAMM50-201ENST00000350028 WTIPA6NIX2 430 aaPredicted RBP19.51■□□□□ 0.71
SAMM50-201ENST00000350028 HIBADHP31937 336 aaKnown RBP19.51■□□□□ 0.71
SAMM50-201ENST00000350028 HS1BP3Q53T59 392 aa19.51■□□□□ 0.71
SAMM50-201ENST00000350028 GIMAP6Q6P9H5 292 aa19.51■□□□□ 0.71
SAMM50-201ENST00000350028 TMED8Q6PL24 325 aaPredicted RBP19.51■□□□□ 0.71
SAMM50-201ENST00000350028 NKX2-3Q8TAU0 364 aa19.51■□□□□ 0.71
SAMM50-201ENST00000350028 LY9Q9HBG7 655 aa19.51■□□□□ 0.71
SAMM50-201ENST00000350028 ZSWIM5Q9P217 1185 aa19.51■□□□□ 0.71
SAMM50-201ENST00000350028 IFIT3O14879 490 aaKnown RBP19.5■□□□□ 0.71
SAMM50-201ENST00000350028 NPHP1O15259 732 aa19.5■□□□□ 0.71
SAMM50-201ENST00000350028 ZBTB43O43298 467 aa19.5■□□□□ 0.71
SAMM50-201ENST00000350028 KDM4AO75164 1064 aa19.5■□□□□ 0.71
SAMM50-201ENST00000350028 GUCY1B3Q02153 619 aa19.5■□□□□ 0.71
SAMM50-201ENST00000350028 NFXL1Q6ZNB6 911 aa19.5■□□□□ 0.71
SAMM50-201ENST00000350028 FBXO18Q8NFZ0 1043 aa19.5■□□□□ 0.71
SAMM50-201ENST00000350028 ANAPC4Q9UJX5 808 aa19.5■□□□□ 0.71
SAMM50-201ENST00000350028 CACNA1SQ13698 1873 aa19.5■□□□□ 0.71
SAMM50-201ENST00000350028 ESPNB1AK53 854 aa19.49■□□□□ 0.71
SAMM50-201ENST00000350028 MAP3K11Q16584 847 aa19.49■□□□□ 0.71
SAMM50-201ENST00000350028 BICD2Q8TD16 824 aa19.49■□□□□ 0.71
SAMM50-201ENST00000350028 RIOK1Q9BRS2 568 aaKnown RBP19.49■□□□□ 0.71
SAMM50-201ENST00000350028 TACC3Q9Y6A5 838 aa19.49■□□□□ 0.71
SAMM50-201ENST00000350028 TNS1Q9HBL0 1735 aaKnown RBP19.49■□□□□ 0.71
SAMM50-201ENST00000350028 CCDC192P0DO97 292 aa19.48■□□□□ 0.71
SAMM50-201ENST00000350028 PPARAQ07869 468 aa19.48■□□□□ 0.71
SAMM50-201ENST00000350028 NFIXQ14938 502 aa19.48■□□□□ 0.71
SAMM50-201ENST00000350028 SART3Q15020 963 aaKnown RBP19.48■□□□□ 0.71
SAMM50-201ENST00000350028 SYNE3Q6ZMZ3 975 aa19.48■□□□□ 0.71
SAMM50-201ENST00000350028 BRAPQ7Z569 592 aa19.48■□□□□ 0.71
SAMM50-201ENST00000350028 ADGRA1Q86SQ6 560 aa19.48■□□□□ 0.71
SAMM50-201ENST00000350028 RAB11FIP4Q86YS3 637 aa19.48■□□□□ 0.71
SAMM50-201ENST00000350028 TMTC2Q8N394 836 aa19.48■□□□□ 0.71
SAMM50-201ENST00000350028 CCDC24Q8N4L8 307 aa19.48■□□□□ 0.71
SAMM50-201ENST00000350028 INCENPQ9NQS7 918 aa19.48■□□□□ 0.71
SAMM50-201ENST00000350028 DACT1Q9NYF0 836 aa19.48■□□□□ 0.71
SAMM50-201ENST00000350028 CCDC69A6NI79 296 aa19.48■□□□□ 0.71
SAMM50-201ENST00000350028 IGSF3O75054 1194 aa19.48■□□□□ 0.71
SAMM50-201ENST00000350028 PPFIA3O75145 1194 aa19.48■□□□□ 0.71
SAMM50-201ENST00000350028 USP28Q96RU2 1077 aa19.48■□□□□ 0.71
SAMM50-201ENST00000350028 CLSTN2Q9H4D0 955 aa19.48■□□□□ 0.71
SAMM50-201ENST00000350028 MYH13Q9UKX3 1938 aa19.47■□□□□ 0.71
SAMM50-201ENST00000350028 NID2Q14112 1375 aa19.47■□□□□ 0.71
SAMM50-201ENST00000350028 GOLGA8AA7E2F4 631 aa19.47■□□□□ 0.71
SAMM50-201ENST00000350028 GRAPQ13588 217 aa19.47■□□□□ 0.71
SAMM50-201ENST00000350028 GRAPLQ8TC17 118 aaPredicted RBP19.47■□□□□ 0.71
SAMM50-201ENST00000350028 BRIP1Q9BX63 1249 aa19.47■□□□□ 0.71
SAMM50-201ENST00000350028 TNMDQ9H2S6 317 aa19.47■□□□□ 0.71
SAMM50-201ENST00000350028 LRRC4BQ9NT99 713 aa19.47■□□□□ 0.71
SAMM50-201ENST00000350028 RTEL1Q9NZ71 1219 aa19.47■□□□□ 0.71
SAMM50-201ENST00000350028 SLC12A7Q9Y666 1083 aa19.47■□□□□ 0.71
SAMM50-201ENST00000350028 ERICH2A1L162 156 aa19.46■□□□□ 0.71
SAMM50-201ENST00000350028 SLC27A3Q5K4L6 730 aa19.46■□□□□ 0.71
SAMM50-201ENST00000350028 CNBD1Q8NA66 436 aa19.46■□□□□ 0.71
SAMM50-201ENST00000350028 SENP2Q9HC62 589 aa19.46■□□□□ 0.71
SAMM50-201ENST00000350028 LEMD3Q9Y2U8 911 aa19.46■□□□□ 0.71
SAMM50-201ENST00000350028 TNRC6CQ9HCJ0 1690 aaKnown RBP19.46■□□□□ 0.71
SAMM50-201ENST00000350028 KLRK1P26718 216 aa19.45■□□□□ 0.7
SAMM50-201ENST00000350028 CDC27P30260 824 aa19.45■□□□□ 0.7
SAMM50-201ENST00000350028 CEBPZQ03701 1054 aaKnown RBP19.45■□□□□ 0.7
SAMM50-201ENST00000350028 WTAPQ15007 396 aa19.45■□□□□ 0.7
SAMM50-201ENST00000350028 RRP12Q5JTH9 1297 aaKnown RBP19.45■□□□□ 0.7
SAMM50-201ENST00000350028 RBM43Q6ZSC3 357 aaKnown RBP19.45■□□□□ 0.7
SAMM50-201ENST00000350028 MICU3Q86XE3 530 aa19.45■□□□□ 0.7
SAMM50-201ENST00000350028 NSUN4Q96CB9 384 aaKnown RBP19.45■□□□□ 0.7
SAMM50-201ENST00000350028 ALG1Q9BT22 464 aa19.45■□□□□ 0.7
SAMM50-201ENST00000350028 TOMM22Q9NS69 142 aa19.45■□□□□ 0.7
SAMM50-201ENST00000350028 TFCP2L1Q9NZI6 479 aa19.45■□□□□ 0.7
SAMM50-201ENST00000350028 CLCN1P35523 988 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms