RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 SYCP2Q9BX26 1530 aa10.07□□□□□ -0.8
UBE2D3-204ENST00000349311 MAP3K4Q9Y6R4 1608 aa10.07□□□□□ -0.8
UBE2D3-204ENST00000349311 SPATA31C1P0DKV0 1188 aa10.07□□□□□ -0.8
UBE2D3-204ENST00000349311 ITPKAP23677 461 aa10.07□□□□□ -0.8
UBE2D3-204ENST00000349311 GRM2Q14416 872 aa10.07□□□□□ -0.8
UBE2D3-204ENST00000349311 SIN3AQ96ST3 1273 aa10.07□□□□□ -0.8
UBE2D3-204ENST00000349311 LACRTQ9GZZ8 138 aa10.07□□□□□ -0.8
UBE2D3-204ENST00000349311 ABCB6Q9NP58 842 aa10.07□□□□□ -0.8
UBE2D3-204ENST00000349311 SH2B1Q9NRF2 756 aaPredicted RBP10.07□□□□□ -0.8
UBE2D3-204ENST00000349311 MFAP1P55081 439 aaKnown RBP10.06□□□□□ -0.8
UBE2D3-204ENST00000349311 PTPN12Q05209 780 aaKnown RBP10.06□□□□□ -0.8
UBE2D3-204ENST00000349311 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.06□□□□□ -0.86e-7■■■■□ 24.1
UBE2D3-204ENST00000349311 KDM6BO15054 1643 aa10.06□□□□□ -0.8
UBE2D3-204ENST00000349311 ZNF644Q9H582 1327 aaPredicted RBP10.06□□□□□ -0.8
UBE2D3-204ENST00000349311 A0A096LPE4 126 aa10.05□□□□□ -0.8
UBE2D3-204ENST00000349311 A0A1W2PPZ6 126 aa10.05□□□□□ -0.8
UBE2D3-204ENST00000349311 KRBA1A5PL33 1030 aa10.05□□□□□ -0.8
UBE2D3-204ENST00000349311 METTL12A8MUP2 240 aa10.05□□□□□ -0.8
UBE2D3-204ENST00000349311 TCERG1O14776 1098 aaKnown RBP10.05□□□□□ -0.8
UBE2D3-204ENST00000349311 ITGB2P05107 769 aa10.05□□□□□ -0.8
UBE2D3-204ENST00000349311 LDHBP07195 334 aaKnown RBP10.05□□□□□ -0.8
UBE2D3-204ENST00000349311 TRIM28Q13263 835 aaKnown RBP10.05□□□□□ -0.8
UBE2D3-204ENST00000349311 MAP4K3Q8IVH8 894 aa10.05□□□□□ -0.8
UBE2D3-204ENST00000349311 FAM43AQ8N2R8 423 aa10.05□□□□□ -0.8
UBE2D3-204ENST00000349311 EHD4Q9H223 541 aa10.05□□□□□ -0.8
UBE2D3-204ENST00000349311 C9orf84Q5VXU9 1444 aa10.05□□□□□ -0.8
UBE2D3-204ENST00000349311 RNF123Q5XPI4 1314 aa10.05□□□□□ -0.8
UBE2D3-204ENST00000349311 ANKRD30AQ9BXX3 1397 aa10.04□□□□□ -0.8
UBE2D3-204ENST00000349311 KDM5DQ9BY66 1539 aa10.04□□□□□ -0.8
UBE2D3-204ENST00000349311 H3BRJ5 948 aa10.04□□□□□ -0.8
UBE2D3-204ENST00000349311 DLL1O00548 723 aa10.04□□□□□ -0.8
UBE2D3-204ENST00000349311 PRPF40AO75400 957 aaKnown RBP10.04□□□□□ -0.8
UBE2D3-204ENST00000349311 EAPPQ56P03 285 aaPredicted RBP10.04□□□□□ -0.8
UBE2D3-204ENST00000349311 WNT8BQ93098 351 aa10.04□□□□□ -0.8
UBE2D3-204ENST00000349311 INO80Q9ULG1 1556 aaPredicted RBP10.04□□□□□ -0.8
UBE2D3-204ENST00000349311 FAM229AH3BQW9 127 aa10.03□□□□□ -0.8
UBE2D3-204ENST00000349311 ELNP15502 786 aa10.03□□□□□ -0.8
UBE2D3-204ENST00000349311 SPRED3Q2MJR0 410 aa10.03□□□□□ -0.8
UBE2D3-204ENST00000349311 EFCAB2Q5VUJ9 269 aa10.03□□□□□ -0.8
UBE2D3-204ENST00000349311 GALNT11Q8NCW6 608 aa10.03□□□□□ -0.8
UBE2D3-204ENST00000349311 BCO2Q9BYV7 579 aa10.03□□□□□ -0.8
UBE2D3-204ENST00000349311 OSBPL7Q9BZF2 842 aa10.03□□□□□ -0.8
UBE2D3-204ENST00000349311 NLRP2Q9NX02 1062 aa10.03□□□□□ -0.8
UBE2D3-204ENST00000349311 TRAK1Q9UPV9 953 aa10.03□□□□□ -0.8
UBE2D3-204ENST00000349311 ARHGEF12Q9NZN5 1544 aa10.02□□□□□ -0.8
UBE2D3-204ENST00000349311 UNC13BO14795 1591 aa10.02□□□□□ -0.81
UBE2D3-204ENST00000349311 RTEL1-TNFRSF6BF6WH68 1400 aa10.02□□□□□ -0.81
UBE2D3-204ENST00000349311 TMEM238LA0A1B0GVL6 79 aa10.02□□□□□ -0.81
UBE2D3-204ENST00000349311 LINC01387J3KSC0 135 aa10.02□□□□□ -0.81
UBE2D3-204ENST00000349311 GIPC1O14908 333 aa10.02□□□□□ -0.81
UBE2D3-204ENST00000349311 ATP2B2Q01814 1243 aa10.02□□□□□ -0.81
UBE2D3-204ENST00000349311 PRRT3Q5FWE3 981 aa10.02□□□□□ -0.81
UBE2D3-204ENST00000349311 FRMD6Q96NE9 622 aa10.02□□□□□ -0.81
UBE2D3-204ENST00000349311 OSGEPQ9NPF4 335 aa10.02□□□□□ -0.81
UBE2D3-204ENST00000349311 FANCAO15360 1455 aa10.02□□□□□ -0.81
UBE2D3-204ENST00000349311 KIF13AQ9H1H9 1805 aa10.02□□□□□ -0.81
UBE2D3-204ENST00000349311 DIP2BQ9P265 1576 aa10.01□□□□□ -0.81
UBE2D3-204ENST00000349311 SOX1O00570 391 aaPredicted RBP10.01□□□□□ -0.81
UBE2D3-204ENST00000349311 FSCN2O14926 492 aa10.01□□□□□ -0.81
UBE2D3-204ENST00000349311 GADD45BO75293 160 aaPredicted RBP10.01□□□□□ -0.81
UBE2D3-204ENST00000349311 GDF11O95390 407 aa10.01□□□□□ -0.81
UBE2D3-204ENST00000349311 ESRRAP11474 423 aaPredicted RBP10.01□□□□□ -0.81
UBE2D3-204ENST00000349311 SELPP16109 830 aa10.01□□□□□ -0.81
UBE2D3-204ENST00000349311 RAC1P63000 192 aa10.01□□□□□ -0.81
UBE2D3-204ENST00000349311 FGD1P98174 961 aa10.01□□□□□ -0.81
UBE2D3-204ENST00000349311 TMEM151AQ8N4L1 468 aa10.01□□□□□ -0.81
UBE2D3-204ENST00000349311 C3orf58Q8NDZ4 430 aa10.01□□□□□ -0.81
UBE2D3-204ENST00000349311 ANKRD24Q8TF21 1146 aa10.01□□□□□ -0.81
UBE2D3-204ENST00000349311 SRCIN1Q9C0H9 1055 aa10.01□□□□□ -0.81
UBE2D3-204ENST00000349311 ZNF576Q9H609 170 aa10.01□□□□□ -0.81
UBE2D3-204ENST00000349311 SOX17Q9H6I2 414 aaPredicted RBP10.01□□□□□ -0.81
UBE2D3-204ENST00000349311 RNF19AQ9NV58 838 aa10.01□□□□□ -0.81
UBE2D3-204ENST00000349311 NEO1Q92859 1461 aa10.01□□□□□ -0.81
UBE2D3-204ENST00000349311 DUOX2Q9NRD8 1548 aa10.01□□□□□ -0.81
UBE2D3-204ENST00000349311 EIF2AK4Q9P2K8 1649 aaKnown RBP10□□□□□ -0.81
UBE2D3-204ENST00000349311 BCORL1Q5H9F3 1711 aa10□□□□□ -0.81
UBE2D3-204ENST00000349311 PIP4K2BP78356 416 aa10□□□□□ -0.81
UBE2D3-204ENST00000349311 TAGLNQ01995 201 aaKnown RBP10□□□□□ -0.81
UBE2D3-204ENST00000349311 GRIK4Q16099 956 aa10□□□□□ -0.81
UBE2D3-204ENST00000349311 NXPE4Q6UWF7 544 aa10□□□□□ -0.81
UBE2D3-204ENST00000349311 KLHL23Q8NBE8 558 aa10□□□□□ -0.81
UBE2D3-204ENST00000349311 ASAP3Q8TDY4 903 aa10□□□□□ -0.81
UBE2D3-204ENST00000349311 CLEC4MQ9H2X3 399 aaPredicted RBP10□□□□□ -0.81
UBE2D3-204ENST00000349311 NUDCQ9Y266 331 aa10□□□□□ -0.81
UBE2D3-204ENST00000349311 ZFYVE16Q7Z3T8 1539 aa10□□□□□ -0.81
UBE2D3-204ENST00000349311 KDM5CP41229 1560 aa10□□□□□ -0.81
UBE2D3-204ENST00000349311 ANKRD50Q9ULJ7 1429 aa9.99□□□□□ -0.81
UBE2D3-204ENST00000349311 RICTORQ6R327 1708 aa9.99□□□□□ -0.81
UBE2D3-204ENST00000349311 KIDINS220Q9ULH0 1771 aa9.99□□□□□ -0.81
UBE2D3-204ENST00000349311 TSPY4P0CV99 314 aa9.99□□□□□ -0.81
UBE2D3-204ENST00000349311 TSPY10P0CW01 314 aa9.99□□□□□ -0.81
UBE2D3-204ENST00000349311 ZNF423Q2M1K9 1284 aa9.99□□□□□ -0.81
UBE2D3-204ENST00000349311 RPS26P11Q5JNZ5 115 aaPredicted RBP9.99□□□□□ -0.81
UBE2D3-204ENST00000349311 HGSNATQ68CP4 663 aa9.99□□□□□ -0.81
UBE2D3-204ENST00000349311 TXNDC11Q6PKC3 985 aa9.99□□□□□ -0.81
UBE2D3-204ENST00000349311 IGF2-ASQ6U949 168 aa9.99□□□□□ -0.81
UBE2D3-204ENST00000349311 LENG1Q96BZ8 264 aaPredicted RBP9.99□□□□□ -0.81
UBE2D3-204ENST00000349311 HIRIP3Q9BW71 556 aaPredicted RBP9.99□□□□□ -0.81
UBE2D3-204ENST00000349311 DEPDC5O75140 1603 aa9.99□□□□□ -0.81
UBE2D3-204ENST00000349311 PPRC1Q5VV67 1664 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms