RNA–Protein interactions for RNA: ENST00000346330.6

UBE2A-201, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2A, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-201ENST00000346330 IRF6O14896 467 aa13.68□□□□□ -0.22
UBE2A-201ENST00000346330 SP3Q02447 781 aa13.68□□□□□ -0.22
UBE2A-201ENST00000346330 TCP10Q12799 353 aa13.68□□□□□ -0.22
UBE2A-201ENST00000346330 HHIPL2Q6UWX4 724 aa13.68□□□□□ -0.22
UBE2A-201ENST00000346330 ARHGAP39Q9C0H5 1083 aa13.68□□□□□ -0.22
UBE2A-201ENST00000346330 FAM198AQ9UFP1 575 aa13.68□□□□□ -0.22
UBE2A-201ENST00000346330 SUGT1Q9Y2Z0 365 aa13.68□□□□□ -0.22
UBE2A-201ENST00000346330 CSADQ9Y600 493 aa13.68□□□□□ -0.22
UBE2A-201ENST00000346330 CIAO1O76071 339 aa13.67□□□□□ -0.22
UBE2A-201ENST00000346330 ECM2O94769 699 aaPredicted RBP13.67□□□□□ -0.22
UBE2A-201ENST00000346330 GTF2A2P52657 109 aa13.67□□□□□ -0.22
UBE2A-201ENST00000346330 RARSP54136 660 aaKnown RBP13.67□□□□□ -0.22
UBE2A-201ENST00000346330 TAF1CQ15572 869 aaPredicted RBP13.67□□□□□ -0.22
UBE2A-201ENST00000346330 FKBP1CQ5VVH2 108 aa13.67□□□□□ -0.22
UBE2A-201ENST00000346330 OTUD7BQ6GQQ9 843 aa13.67□□□□□ -0.22
UBE2A-201ENST00000346330 WDR66Q8TBY9 1149 aa13.67□□□□□ -0.22
UBE2A-201ENST00000346330 ERO1AQ96HE7 468 aa13.67□□□□□ -0.22
UBE2A-201ENST00000346330 EFCC1Q9HA90 598 aa13.67□□□□□ -0.22
UBE2A-201ENST00000346330 TIMM10P62072 90 aa13.66□□□□□ -0.22
UBE2A-201ENST00000346330 PRPF38BQ5VTL8 546 aaKnown RBP13.66□□□□□ -0.22
UBE2A-201ENST00000346330 ERO1BQ86YB8 467 aa13.66□□□□□ -0.22
UBE2A-201ENST00000346330 TMOD2Q9NZR1 351 aa13.66□□□□□ -0.22
UBE2A-201ENST00000346330 CEP126Q9P2H0 1117 aa13.66□□□□□ -0.22
UBE2A-201ENST00000346330 PTCH2Q9Y6C5 1203 aa13.66□□□□□ -0.22
UBE2A-201ENST00000346330 MAST3O60307 1309 aa13.65□□□□□ -0.22
UBE2A-201ENST00000346330 EN2P19622 333 aaPredicted RBP13.65□□□□□ -0.22
UBE2A-201ENST00000346330 CTGFP29279 349 aa13.65□□□□□ -0.22
UBE2A-201ENST00000346330 MOGSQ13724 837 aa13.65□□□□□ -0.22
UBE2A-201ENST00000346330 RASGRF1Q13972 1273 aa13.65□□□□□ -0.22
UBE2A-201ENST00000346330 CCDC102BQ68D86 513 aa13.65□□□□□ -0.22
UBE2A-201ENST00000346330 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.65□□□□□ -0.22
UBE2A-201ENST00000346330 FAM151AQ8WW52 585 aa13.65□□□□□ -0.22
UBE2A-201ENST00000346330 ARMC5Q96C12 935 aa13.65□□□□□ -0.22
UBE2A-201ENST00000346330 API5Q9BZZ5 524 aaKnown RBP13.65□□□□□ -0.22
UBE2A-201ENST00000346330 COPRSQ9NQ92 184 aa13.65□□□□□ -0.22
UBE2A-201ENST00000346330 ATRNL1Q5VV63 1379 aa13.65□□□□□ -0.22
UBE2A-201ENST00000346330 RPAP1Q9BWH6 1393 aaPredicted RBP13.65□□□□□ -0.22
UBE2A-201ENST00000346330 MYCP01106 439 aaPredicted RBP13.64□□□□□ -0.23
UBE2A-201ENST00000346330 LDHBP07195 334 aaKnown RBP13.64□□□□□ -0.23
UBE2A-201ENST00000346330 IL15P40933 162 aaPredicted RBP13.64□□□□□ -0.23
UBE2A-201ENST00000346330 PI16Q6UXB8 463 aa13.64□□□□□ -0.23
UBE2A-201ENST00000346330 PPP4R3CPQ6ZMV5 832 aa13.64□□□□□ -0.23
UBE2A-201ENST00000346330 SH3BP5LQ7L8J4 393 aa13.64□□□□□ -0.23
UBE2A-201ENST00000346330 ZNF384Q8TF68 577 aa13.64□□□□□ -0.23
UBE2A-201ENST00000346330 ZFYVE28Q9HCC9 887 aa13.64□□□□□ -0.23
UBE2A-201ENST00000346330 USP40Q9NVE5 1235 aa13.64□□□□□ -0.23
UBE2A-201ENST00000346330 ZNF112Q9UJU3 913 aa13.64□□□□□ -0.23
UBE2A-201ENST00000346330 RFX7Q2KHR2 1363 aa13.63□□□□□ -0.23
UBE2A-201ENST00000346330 TLR2O60603 784 aa13.63□□□□□ -0.23
UBE2A-201ENST00000346330 BCAR3O75815 825 aa13.63□□□□□ -0.23
UBE2A-201ENST00000346330 CETPP11597 493 aa13.63□□□□□ -0.23
UBE2A-201ENST00000346330 TFCP2Q12800 502 aa13.63□□□□□ -0.23
UBE2A-201ENST00000346330 PPIL2Q13356 520 aa13.63□□□□□ -0.23
UBE2A-201ENST00000346330 SNAPC2Q13487 334 aa13.63□□□□□ -0.23
UBE2A-201ENST00000346330 INTS3Q68E01 1043 aaKnown RBP13.63□□□□□ -0.23
UBE2A-201ENST00000346330 ZNF341Q9BYN7 854 aa13.63□□□□□ -0.23
UBE2A-201ENST00000346330 DDX4Q9NQI0 724 aaKnown RBP13.63□□□□□ -0.23
UBE2A-201ENST00000346330 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.63□□□□□ -0.23
UBE2A-201ENST00000346330 FBXO3Q9UK99 471 aa13.63□□□□□ -0.23
UBE2A-201ENST00000346330 SZT2Q5T011 3432 aa13.63□□□□□ -0.23
UBE2A-201ENST00000346330 SALL1Q9NSC2 1324 aa13.63□□□□□ -0.23
UBE2A-201ENST00000346330 CT47B1P0C2W7 299 aaPredicted RBP13.62□□□□□ -0.23
UBE2A-201ENST00000346330 TRIM27P14373 513 aa13.62□□□□□ -0.23
UBE2A-201ENST00000346330 RGS3P49796 1198 aa13.62□□□□□ -0.23
UBE2A-201ENST00000346330 DCAF15Q66K64 600 aa13.62□□□□□ -0.23
UBE2A-201ENST00000346330 ZNF333Q96JL9 665 aa13.62□□□□□ -0.23
UBE2A-201ENST00000346330 CPA4Q9UI42 421 aa13.62□□□□□ -0.23
UBE2A-201ENST00000346330 RANBP2P49792 3224 aaKnown RBP13.62□□□□□ -0.23
UBE2A-201ENST00000346330 GAKO14976 1311 aa13.62□□□□□ -0.23
UBE2A-201ENST00000346330 A0A1B0GUL7 405 aa13.61□□□□□ -0.23
UBE2A-201ENST00000346330 PHF20L1A8MW92 1017 aa13.61□□□□□ -0.23
UBE2A-201ENST00000346330 SRGAP3O43295 1099 aa13.61□□□□□ -0.23
UBE2A-201ENST00000346330 WDHD1O75717 1129 aaPredicted RBP13.61□□□□□ -0.23
UBE2A-201ENST00000346330 LACTBP83111 547 aaPredicted RBP13.61□□□□□ -0.23
UBE2A-201ENST00000346330 PPATQ06203 517 aa13.61□□□□□ -0.23
UBE2A-201ENST00000346330 C17orf99Q6UX52 265 aa13.61□□□□□ -0.23
UBE2A-201ENST00000346330 CCDC84Q86UT8 332 aaPredicted RBP13.61□□□□□ -0.23
UBE2A-201ENST00000346330 SH3TC2Q8TF17 1288 aa13.61□□□□□ -0.23
UBE2A-201ENST00000346330 CLUAP1Q96AJ1 413 aa13.61□□□□□ -0.23
UBE2A-201ENST00000346330 XAGE2Q96GT9 111 aa13.61□□□□□ -0.23
UBE2A-201ENST00000346330 DENND2AQ9ULE3 1009 aa13.61□□□□□ -0.23
UBE2A-201ENST00000346330 KCNH4Q9UQ05 1017 aa13.61□□□□□ -0.23
UBE2A-201ENST00000346330 ADGRA2Q96PE1 1338 aa13.61□□□□□ -0.23
UBE2A-201ENST00000346330 PNMA6EA0A0J9YXQ4 647 aa13.6□□□□□ -0.23
UBE2A-201ENST00000346330 DDTLA6NHG4 134 aaPredicted RBP13.6□□□□□ -0.23
UBE2A-201ENST00000346330 SEMA3EO15041 775 aa13.6□□□□□ -0.23
UBE2A-201ENST00000346330 MTX1Q13505 466 aa13.6□□□□□ -0.23
UBE2A-201ENST00000346330 GPAT2Q6NUI2 795 aa13.6□□□□□ -0.23
UBE2A-201ENST00000346330 TBC1D9Q6ZT07 1266 aa13.6□□□□□ -0.23
UBE2A-201ENST00000346330 GNL3LQ9NVN8 582 aaKnown RBP13.6□□□□□ -0.23
UBE2A-201ENST00000346330 ABCF2Q9UG63 623 aa13.6□□□□□ -0.23
UBE2A-201ENST00000346330 KIAA0100Q14667 2235 aaKnown RBP13.59□□□□□ -0.23
UBE2A-201ENST00000346330 FAM196BA6NMK8 535 aa13.59□□□□□ -0.23
UBE2A-201ENST00000346330 CCER2I3L3R5 266 aa13.59□□□□□ -0.23
UBE2A-201ENST00000346330 PDHXO00330 501 aa13.59□□□□□ -0.23
UBE2A-201ENST00000346330 BTDP43251 543 aa13.59□□□□□ -0.23
UBE2A-201ENST00000346330 SLC9C1Q4G0N8 1177 aa13.59□□□□□ -0.23
UBE2A-201ENST00000346330 NOL9Q5SY16 702 aaKnown RBP13.59□□□□□ -0.23
UBE2A-201ENST00000346330 HOOK2Q96ED9 719 aa13.59□□□□□ -0.23
UBE2A-201ENST00000346330 TRIM47Q96LD4 638 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms