RNA–Protein interactions for RNA: ENST00000346329.7

CTTN-202, Transcript of cortactin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-202ENST00000346329 KCNJ14Q9UNX9 436 aa17.58■□□□□ 0.4
CTTN-202ENST00000346329 ZSCAN22P10073 491 aaPredicted RBP17.57■□□□□ 0.4
CTTN-202ENST00000346329 SPECC1Q5M775 1068 aa17.57■□□□□ 0.4
CTTN-202ENST00000346329 GGA1Q9UJY5 639 aa17.57■□□□□ 0.4
CTTN-202ENST00000346329 NRAPQ86VF7 1730 aa17.57■□□□□ 0.4
CTTN-202ENST00000346329 GOLGA8HP0CJ92 632 aa17.57■□□□□ 0.4
CTTN-202ENST00000346329 PDIA3P30101 505 aaKnown RBP17.57■□□□□ 0.4
CTTN-202ENST00000346329 SHROOM1Q2M3G4 852 aaPredicted RBP17.57■□□□□ 0.4
CTTN-202ENST00000346329 NCOA7Q8NI08 942 aa17.57■□□□□ 0.4
CTTN-202ENST00000346329 SLC26A6Q9BXS9 759 aa17.57■□□□□ 0.4
CTTN-202ENST00000346329 TMEM63CQ9P1W3 806 aa17.57■□□□□ 0.4
CTTN-202ENST00000346329 MTMR6Q9Y217 621 aa17.57■□□□□ 0.4
CTTN-202ENST00000346329 CEP350Q5VT06 3117 aa17.57■□□□□ 0.4
CTTN-202ENST00000346329 GIMAP6Q6P9H5 292 aa17.57■□□□□ 0.4
CTTN-202ENST00000346329 STX8Q9UNK0 236 aa17.57■□□□□ 0.4
CTTN-202ENST00000346329 ABCC6O95255 1503 aa17.56■□□□□ 0.4
CTTN-202ENST00000346329 RPAP1Q9BWH6 1393 aaPredicted RBP17.56■□□□□ 0.4
CTTN-202ENST00000346329 TCRBV5S4A2TA0A5A2 114 aa17.56■□□□□ 0.4
CTTN-202ENST00000346329 GOLGA6L3A6NEY3 463 aa17.56■□□□□ 0.4
CTTN-202ENST00000346329 DDX11L8A8MPP1 907 aa17.56■□□□□ 0.4
CTTN-202ENST00000346329 ARID4AP29374 1257 aaPredicted RBP17.56■□□□□ 0.4
CTTN-202ENST00000346329 TTF1Q15361 905 aaPredicted RBP17.56■□□□□ 0.4
CTTN-202ENST00000346329 CTDNEP1O95476 244 aa17.56■□□□□ 0.4
CTTN-202ENST00000346329 BRD1O95696 1058 aa17.56■□□□□ 0.4
CTTN-202ENST00000346329 LDHBP07195 334 aaKnown RBP17.56■□□□□ 0.4
CTTN-202ENST00000346329 CDC27P30260 824 aa17.56■□□□□ 0.4
CTTN-202ENST00000346329 RC3H1Q5TC82 1133 aaKnown RBP17.56■□□□□ 0.4
CTTN-202ENST00000346329 ORC3Q9UBD5 711 aaPredicted RBP17.56■□□□□ 0.4
CTTN-202ENST00000346329 BTAF1O14981 1849 aa17.56■□□□□ 0.4
CTTN-202ENST00000346329 SPEF2Q9C093 1822 aa17.56■□□□□ 0.4
CTTN-202ENST00000346329 GOLGA6L4A6NEF3 574 aa17.55■□□□□ 0.4
CTTN-202ENST00000346329 GUCY1A2P33402 732 aa17.55■□□□□ 0.4
CTTN-202ENST00000346329 MCM5P33992 734 aa17.55■□□□□ 0.4
CTTN-202ENST00000346329 DPP8Q6V1X1 898 aaPredicted RBP17.55■□□□□ 0.4
CTTN-202ENST00000346329 ZSCAN29Q8IWY8 852 aaPredicted RBP17.55■□□□□ 0.4
CTTN-202ENST00000346329 ZC3H12CQ9C0D7 883 aaKnown RBP17.55■□□□□ 0.4
CTTN-202ENST00000346329 COL1A1P02452 1464 aaPredicted RBP17.55■□□□□ 0.4
CTTN-202ENST00000346329 USP17L3A6NCW0 530 aa17.55■□□□□ 0.4
CTTN-202ENST00000346329 USP17L4A6NCW7 530 aa17.55■□□□□ 0.4
CTTN-202ENST00000346329 RAD17O75943 681 aa17.55■□□□□ 0.4
CTTN-202ENST00000346329 F13A1P00488 732 aa17.55■□□□□ 0.4
CTTN-202ENST00000346329 CUL4AQ13619 759 aa17.55■□□□□ 0.4
CTTN-202ENST00000346329 USP17L1Q7RTZ2 530 aa17.55■□□□□ 0.4
CTTN-202ENST00000346329 ZBTB12Q9Y330 459 aaPredicted RBP17.55■□□□□ 0.4
CTTN-202ENST00000346329 LAMB4A4D0S4 1761 aa17.55■□□□□ 0.4
CTTN-202ENST00000346329 PPEF1O14829 653 aaPredicted RBP17.54■□□□□ 0.4
CTTN-202ENST00000346329 MARCKSP29966 332 aaPredicted RBP17.54■□□□□ 0.4
CTTN-202ENST00000346329 R3HDM1Q15032 1099 aaKnown RBP17.54■□□□□ 0.4
CTTN-202ENST00000346329 AOC3Q16853 763 aa17.54■□□□□ 0.4
CTTN-202ENST00000346329 DSCC1Q9BVC3 393 aa17.54■□□□□ 0.4
CTTN-202ENST00000346329 ONECUT3O60422 494 aaPredicted RBP17.54■□□□□ 0.4
CTTN-202ENST00000346329 ZSCAN25Q6NSZ9 544 aa17.54■□□□□ 0.4
CTTN-202ENST00000346329 BICD2Q8TD16 824 aa17.54■□□□□ 0.4
CTTN-202ENST00000346329 PNPLA7Q6ZV29 1317 aa17.54■□□□□ 0.4
CTTN-202ENST00000346329 ATRNO75882 1429 aa17.54■□□□□ 0.4
CTTN-202ENST00000346329 MCM2P49736 904 aa17.53■□□□□ 0.4
CTTN-202ENST00000346329 UBAC1Q9BSL1 405 aa17.53■□□□□ 0.4
CTTN-202ENST00000346329 NUP188Q5SRE5 1749 aa17.53■□□□□ 0.4
CTTN-202ENST00000346329 CCDC69A6NI79 296 aa17.53■□□□□ 0.4
CTTN-202ENST00000346329 VEGFAP15692 232 aaPredicted RBP17.53■□□□□ 0.4
CTTN-202ENST00000346329 UBE4AQ14139 1066 aa17.53■□□□□ 0.4
CTTN-202ENST00000346329 GTF3C6Q969F1 213 aa17.53■□□□□ 0.4
CTTN-202ENST00000346329 RBM17Q96I25 401 aaKnown RBP17.53■□□□□ 0.4
CTTN-202ENST00000346329 CWC22Q9HCG8 908 aaKnown RBP17.53■□□□□ 0.4
CTTN-202ENST00000346329 CTNNA3Q9UI47 895 aa17.53■□□□□ 0.4
CTTN-202ENST00000346329 COL22A1Q8NFW1 1626 aaPredicted RBP17.53■□□□□ 0.4
CTTN-202ENST00000346329 WDR33Q9C0J8 1336 aaKnown RBP17.53■□□□□ 0.4
CTTN-202ENST00000346329 GOLGA8AA7E2F4 631 aa17.53■□□□□ 0.4
CTTN-202ENST00000346329 ZFYP08048 801 aaPredicted RBP17.53■□□□□ 0.4
CTTN-202ENST00000346329 METAP2P50579 478 aaKnown RBP eCLIP17.53■□□□□ 0.4
CTTN-202ENST00000346329 PPARAQ07869 468 aa17.53■□□□□ 0.4
CTTN-202ENST00000346329 TBC1D16Q8TBP0 767 aa17.53■□□□□ 0.4
CTTN-202ENST00000346329 NSUN4Q96CB9 384 aaKnown RBP17.53■□□□□ 0.4
CTTN-202ENST00000346329 NACAP1Q9BZK3 213 aa17.53■□□□□ 0.4
CTTN-202ENST00000346329 CD209Q9NNX6 404 aa17.53■□□□□ 0.4
CTTN-202ENST00000346329 MRVI1Q9Y6F6 885 aa17.53■□□□□ 0.4
CTTN-202ENST00000346329 PATL2C9JE40 543 aaKnown RBP17.52■□□□□ 0.4
CTTN-202ENST00000346329 DHX16O60231 1041 aaKnown RBP17.52■□□□□ 0.4
CTTN-202ENST00000346329 PLCD1P51178 756 aa17.52■□□□□ 0.4
CTTN-202ENST00000346329 LRRFIP1Q32MZ4 808 aaKnown RBP17.52■□□□□ 0.4
CTTN-202ENST00000346329 KRT32Q14532 448 aa17.52■□□□□ 0.4
CTTN-202ENST00000346329 HOMER1Q86YM7 354 aa17.52■□□□□ 0.4
CTTN-202ENST00000346329 TSPY2A6NKD2 308 aa17.52■□□□□ 0.39
CTTN-202ENST00000346329 XRCC6P12956 609 aaKnown RBP eCLIP17.52■□□□□ 0.395e-6■■■■■ 27.9
CTTN-202ENST00000346329 ZRSR1Q15695 479 aaKnown RBP17.52■□□□□ 0.39
CTTN-202ENST00000346329 ZNF277Q9NRM2 450 aaPredicted RBP17.52■□□□□ 0.39
CTTN-202ENST00000346329 MPHOSPH10O00566 681 aaKnown RBP17.51■□□□□ 0.39
CTTN-202ENST00000346329 NSUN7Q8NE18 718 aaKnown RBP17.51■□□□□ 0.39
CTTN-202ENST00000346329 TMX4Q9H1E5 349 aaPredicted RBP17.51■□□□□ 0.39
CTTN-202ENST00000346329 MKNK2Q9HBH9 465 aa17.51■□□□□ 0.39
CTTN-202ENST00000346329 TTF2Q9UNY4 1162 aaKnown RBP17.51■□□□□ 0.39
CTTN-202ENST00000346329 SLC12A7Q9Y666 1083 aa17.51■□□□□ 0.39
CTTN-202ENST00000346329 TCHHQ07283 1943 aa17.51■□□□□ 0.39
CTTN-202ENST00000346329 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.51■□□□□ 0.39
CTTN-202ENST00000346329 CLRN2A0PK11 232 aa17.5■□□□□ 0.39
CTTN-202ENST00000346329 BTDP43251 543 aa17.5■□□□□ 0.39
CTTN-202ENST00000346329 CIZ1Q9ULV3 898 aaPredicted RBP17.5■□□□□ 0.39
CTTN-202ENST00000346329 UBE3CQ15386 1083 aa17.5■□□□□ 0.39
CTTN-202ENST00000346329 ZSCAN23Q3MJ62 389 aa17.5■□□□□ 0.39
CTTN-202ENST00000346329 TTC6Q86TZ1 520 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms