RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 SHC4Q6S5L8 630 aa20.49■□□□□ 0.87
VHL-202ENST00000345392 ZBTB9Q96C00 473 aa20.49■□□□□ 0.87
VHL-202ENST00000345392 TUBE1Q9UJT0 475 aa20.49■□□□□ 0.87
VHL-202ENST00000345392 ZNF330Q9Y3S2 320 aaPredicted RBP20.49■□□□□ 0.87
VHL-202ENST00000345392 C1orf167Q5SNV9 1468 aa20.49■□□□□ 0.87
VHL-202ENST00000345392 CBFA2T2O43439 604 aa20.49■□□□□ 0.87
VHL-202ENST00000345392 A1BGP04217 495 aa20.49■□□□□ 0.87
VHL-202ENST00000345392 OAS2P29728 719 aaKnown RBP20.49■□□□□ 0.87
VHL-202ENST00000345392 FOXO4P98177 505 aa20.49■□□□□ 0.87
VHL-202ENST00000345392 CCDC158Q5M9N0 1113 aa20.49■□□□□ 0.87
VHL-202ENST00000345392 TMEM139Q8IV31 216 aa20.49■□□□□ 0.87
VHL-202ENST00000345392 CHMP4CQ96CF2 233 aa20.49■□□□□ 0.87
VHL-202ENST00000345392 FOXP2O15409 715 aa20.48■□□□□ 0.87
VHL-202ENST00000345392 DHX16O60231 1041 aaKnown RBP20.48■□□□□ 0.87
VHL-202ENST00000345392 GYS2P54840 703 aa20.48■□□□□ 0.87
VHL-202ENST00000345392 CC2D1AQ6P1N0 951 aaPredicted RBP20.48■□□□□ 0.87
VHL-202ENST00000345392 CADPS2Q86UW7 1296 aa20.48■□□□□ 0.87
VHL-202ENST00000345392 PUS3Q9BZE2 481 aaKnown RBP20.48■□□□□ 0.87
VHL-202ENST00000345392 INTS13Q9NVM9 706 aa20.48■□□□□ 0.87
VHL-202ENST00000345392 ZSCAN12O43309 604 aa20.48■□□□□ 0.87
VHL-202ENST00000345392 FGAP02671 866 aa20.48■□□□□ 0.87
VHL-202ENST00000345392 RXRAP19793 462 aa20.48■□□□□ 0.87
VHL-202ENST00000345392 CASQ1P31415 396 aa20.48■□□□□ 0.87
VHL-202ENST00000345392 FOXP4Q8IVH2 680 aaPredicted RBP20.48■□□□□ 0.87
VHL-202ENST00000345392 ADAMTS7Q9UKP4 1686 aa20.47■□□□□ 0.87
VHL-202ENST00000345392 CDC27P30260 824 aa20.47■□□□□ 0.87
VHL-202ENST00000345392 ANTXR2P58335 489 aa20.47■□□□□ 0.87
VHL-202ENST00000345392 DCAF5Q96JK2 942 aa20.47■□□□□ 0.87
VHL-202ENST00000345392 ADKP55263 362 aaKnown RBP20.47■□□□□ 0.87
VHL-202ENST00000345392 PDE4BQ07343 736 aa20.47■□□□□ 0.87
VHL-202ENST00000345392 SMC1AQ14683 1233 aaKnown RBP20.47■□□□□ 0.87
VHL-202ENST00000345392 IMMTQ16891 758 aaKnown RBP20.47■□□□□ 0.87
VHL-202ENST00000345392 TOGARAM2Q6ZUX3 1019 aa20.47■□□□□ 0.87
VHL-202ENST00000345392 DENND2AQ9ULE3 1009 aa20.47■□□□□ 0.87
VHL-202ENST00000345392 A0A1B0GUL7 405 aa20.46■□□□□ 0.87
VHL-202ENST00000345392 ARHGAP6O43182 974 aa20.46■□□□□ 0.87
VHL-202ENST00000345392 PLBD2Q8NHP8 589 aa20.46■□□□□ 0.87
VHL-202ENST00000345392 FOXN1O15353 648 aa20.46■□□□□ 0.87
VHL-202ENST00000345392 PPP2R3AQ06190 1150 aa20.46■□□□□ 0.87
VHL-202ENST00000345392 RAD51AP2Q09MP3 1159 aa20.46■□□□□ 0.87
VHL-202ENST00000345392 LONRF3Q496Y0 759 aa20.46■□□□□ 0.87
VHL-202ENST00000345392 OLFM4Q6UX06 510 aa20.46■□□□□ 0.87
VHL-202ENST00000345392 MB21D2Q8IYB1 491 aaPredicted RBP20.46■□□□□ 0.87
VHL-202ENST00000345392 BAG1Q99933 345 aaPredicted RBP20.46■□□□□ 0.87
VHL-202ENST00000345392 UBXN6Q9BZV1 441 aa20.46■□□□□ 0.87
VHL-202ENST00000345392 SLAIN2Q9P270 581 aa20.46■□□□□ 0.87
VHL-202ENST00000345392 TPM1P09493 284 aa20.45■□□□□ 0.86
VHL-202ENST00000345392 MAP3K9P80192 1104 aa20.45■□□□□ 0.86
VHL-202ENST00000345392 SPECC1Q5M775 1068 aa20.45■□□□□ 0.86
VHL-202ENST00000345392 KRBA2Q6ZNG9 492 aa20.45■□□□□ 0.86
VHL-202ENST00000345392 METTL16Q86W50 562 aaKnown RBP20.45■□□□□ 0.86
VHL-202ENST00000345392 VPS37DQ86XT2 251 aa20.45■□□□□ 0.86
VHL-202ENST00000345392 FBXL16Q8N461 479 aa20.45■□□□□ 0.86
VHL-202ENST00000345392 PARD6BQ9BYG5 372 aa20.45■□□□□ 0.86
VHL-202ENST00000345392 ZSWIM4Q9H7M6 989 aa20.45■□□□□ 0.86
VHL-202ENST00000345392 HPSEQ9Y251 543 aa20.45■□□□□ 0.86
VHL-202ENST00000345392 PCDHA5Q9Y5H7 936 aa20.45■□□□□ 0.86
VHL-202ENST00000345392 MST1RQ04912 1400 aa20.45■□□□□ 0.86
VHL-202ENST00000345392 BMP6P22004 513 aa20.45■□□□□ 0.86
VHL-202ENST00000345392 MPHOSPH8Q99549 860 aa20.45■□□□□ 0.86
VHL-202ENST00000345392 DESI2Q9BSY9 194 aa20.45■□□□□ 0.86
VHL-202ENST00000345392 ARFGEF2Q9Y6D5 1785 aa20.45■□□□□ 0.86
VHL-202ENST00000345392 ALG1Q9BT22 464 aa20.44■□□□□ 0.86
VHL-202ENST00000345392 PIP4K2BP78356 416 aa20.44■□□□□ 0.86
VHL-202ENST00000345392 KARSQ15046 597 aaKnown RBP20.44■□□□□ 0.86
VHL-202ENST00000345392 RALYLQ86SE5 291 aaKnown RBP20.44■□□□□ 0.86
VHL-202ENST00000345392 GPR161Q8N6U8 529 aaKnown RBP20.44■□□□□ 0.86
VHL-202ENST00000345392 NKX2-3Q8TAU0 364 aa20.44■□□□□ 0.86
VHL-202ENST00000345392 PHKBQ93100 1093 aa20.43■□□□□ 0.86
VHL-202ENST00000345392 IRX2Q9BZI1 471 aaPredicted RBP20.43■□□□□ 0.86
VHL-202ENST00000345392 MRFAP1Q9Y605 127 aa20.43■□□□□ 0.86
VHL-202ENST00000345392 IL15P40933 162 aaPredicted RBP20.43■□□□□ 0.86
VHL-202ENST00000345392 CNNM3Q8NE01 707 aa20.43■□□□□ 0.86
VHL-202ENST00000345392 NCOA7Q8NI08 942 aa20.43■□□□□ 0.86
VHL-202ENST00000345392 DHX58Q96C10 678 aa20.43■□□□□ 0.86
VHL-202ENST00000345392 PUS7LQ9H0K6 701 aaKnown RBP20.43■□□□□ 0.86
VHL-202ENST00000345392 ARFGAP3Q9NP61 516 aa20.43■□□□□ 0.86
VHL-202ENST00000345392 LTBP4Q8N2S1 1624 aa20.43■□□□□ 0.86
VHL-202ENST00000345392 PTPAQ15257 358 aa20.42■□□□□ 0.86
VHL-202ENST00000345392 KRT40Q6A162 431 aa20.42■□□□□ 0.86
VHL-202ENST00000345392 FCHSD1Q86WN1 690 aa20.42■□□□□ 0.86
VHL-202ENST00000345392 TXLNBQ8N3L3 684 aa20.42■□□□□ 0.86
VHL-202ENST00000345392 ATP8B1O43520 1251 aa20.42■□□□□ 0.86
VHL-202ENST00000345392 UBE2Q2LH0YL09 131 aa20.41■□□□□ 0.86
VHL-202ENST00000345392 H7C1W4 665 aa20.41■□□□□ 0.86
VHL-202ENST00000345392 ADORA1P30542 326 aa20.41■□□□□ 0.86
VHL-202ENST00000345392 PI16Q6UXB8 463 aa20.41■□□□□ 0.86
VHL-202ENST00000345392 BRINP3Q76B58 766 aa20.41■□□□□ 0.86
VHL-202ENST00000345392 RSRC2Q7L4I2 434 aaKnown RBP20.41■□□□□ 0.86
VHL-202ENST00000345392 TC2NQ8N9U0 490 aa20.41■□□□□ 0.86
VHL-202ENST00000345392 CWC25Q9NXE8 425 aaPredicted RBP20.41■□□□□ 0.86
VHL-202ENST00000345392 CCDC102BQ68D86 513 aa20.41■□□□□ 0.86
VHL-202ENST00000345392 KIFC2Q96AC6 838 aa20.41■□□□□ 0.86
VHL-202ENST00000345392 FUT8Q9BYC5 575 aa20.41■□□□□ 0.86
VHL-202ENST00000345392 EYA2O00167 538 aa20.4■□□□□ 0.86
VHL-202ENST00000345392 ZNF213O14771 459 aa20.4■□□□□ 0.86
VHL-202ENST00000345392 MTF1Q14872 753 aa20.4■□□□□ 0.86
VHL-202ENST00000345392 RESP18Q5W5W9 173 aa20.4■□□□□ 0.86
VHL-202ENST00000345392 TRMT44Q8IYL2 757 aaKnown RBP20.4■□□□□ 0.86
VHL-202ENST00000345392 MAP3K14Q99558 947 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms