RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ZNF853P0CG23 659 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 SEPT14Q6ZU15 432 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 ZNF444Q8N0Y2 327 aaPredicted RBP13.57□□□□□ -0.24
COL12A1-202ENST00000345356 NOC4LQ9BVI4 516 aaKnown RBP13.57□□□□□ -0.24
COL12A1-202ENST00000345356 NCOA5Q9HCD5 579 aaKnown RBP13.57□□□□□ -0.24
COL12A1-202ENST00000345356 JAK2O60674 1132 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 GUCY2FP51841 1108 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 MUM1Q2TAK8 710 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 TMTC2Q8N394 836 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 RAB3IL1Q8TBN0 382 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 VCX3BQ9H321 246 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 KIAA1468Q9P260 1216 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 CHPF2Q9P2E5 772 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 WWC3Q9ULE0 1092 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 POLR2DO15514 142 aaKnown RBP13.56□□□□□ -0.24
COL12A1-202ENST00000345356 OTUD7BQ6GQQ9 843 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 CEP128Q6ZU80 1094 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 SRGAP1Q7Z6B7 1085 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 FBXO18Q8NFZ0 1043 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 ATP5J2-PTCD1G3V325 749 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 PTCD1O75127 700 aaKnown RBP13.56□□□□□ -0.24
COL12A1-202ENST00000345356 TRIM4Q9C037 500 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 FAM135AQ9P2D6 1515 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 LUC7L3O95232 432 aaKnown RBP13.56□□□□□ -0.24
COL12A1-202ENST00000345356 CFAP221Q4G0U5 840 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 GKAP1Q5VSY0 366 aaPredicted RBP13.56□□□□□ -0.24
COL12A1-202ENST00000345356 ZNF365Q70YC5 407 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 TAB2Q9NYJ8 693 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 SLC5A1P13866 664 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 TAOK1Q7L7X3 1001 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 TTC6Q86TZ1 520 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 KAT14Q9H8E8 782 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 DDX21Q9NR30 783 aaKnown RBP eCLIP13.56□□□□□ -0.24
COL12A1-202ENST00000345356 INSRP06213 1382 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 CETN3O15182 167 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 SMIM24O75264 130 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 IFT88Q13099 833 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 FYB2Q5VWT5 728 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 CCDC63Q8NA47 563 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 PAG1Q9NWQ8 432 aa13.56□□□□□ -0.24
COL12A1-202ENST00000345356 ANKRD65E5RJM6 399 aa13.55□□□□□ -0.24
COL12A1-202ENST00000345356 ACTN4O43707 911 aaKnown RBP13.55□□□□□ -0.24
COL12A1-202ENST00000345356 FERP16591 822 aa13.55□□□□□ -0.24
COL12A1-202ENST00000345356 MTMR3Q13615 1198 aa13.55□□□□□ -0.24
COL12A1-202ENST00000345356 CNNM2Q9H8M5 875 aa13.55□□□□□ -0.24
COL12A1-202ENST00000345356 KRT2P35908 639 aa13.55□□□□□ -0.24
COL12A1-202ENST00000345356 ME3Q16798 604 aa13.55□□□□□ -0.24
COL12A1-202ENST00000345356 NAA16Q6N069 864 aaPredicted RBP13.55□□□□□ -0.24
COL12A1-202ENST00000345356 SYCP3Q8IZU3 236 aa13.55□□□□□ -0.24
COL12A1-202ENST00000345356 PUS7Q96PZ0 661 aaKnown RBP13.55□□□□□ -0.24
COL12A1-202ENST00000345356 VAT1LQ9HCJ6 419 aa13.55□□□□□ -0.24
COL12A1-202ENST00000345356 PALD1Q9ULE6 856 aa13.55□□□□□ -0.24
COL12A1-202ENST00000345356 MTUS1Q9ULD2 1270 aa13.55□□□□□ -0.24
COL12A1-202ENST00000345356 MAPK8IP1Q9UQF2 711 aa13.55□□□□□ -0.24
COL12A1-202ENST00000345356 SBNO2Q9Y2G9 1366 aa13.55□□□□□ -0.24
COL12A1-202ENST00000345356 PHLPP2Q6ZVD8 1323 aa13.55□□□□□ -0.24
COL12A1-202ENST00000345356 LRRD1A4D1F6 860 aa13.55□□□□□ -0.24
COL12A1-202ENST00000345356 TSPY2A6NKD2 308 aa13.55□□□□□ -0.24
COL12A1-202ENST00000345356 GYS2P54840 703 aa13.55□□□□□ -0.24
COL12A1-202ENST00000345356 CEP120Q8N960 986 aa13.55□□□□□ -0.24
COL12A1-202ENST00000345356 CUTAO60888 179 aa13.54□□□□□ -0.24
COL12A1-202ENST00000345356 PARD6BQ9BYG5 372 aa13.54□□□□□ -0.24
COL12A1-202ENST00000345356 MCM7P33993 719 aa13.54□□□□□ -0.24
COL12A1-202ENST00000345356 STXBP4Q6ZWJ1 553 aa13.54□□□□□ -0.24
COL12A1-202ENST00000345356 CDC23Q9UJX2 597 aa13.54□□□□□ -0.24
COL12A1-202ENST00000345356 VWA3AA6NCI4 1184 aa13.54□□□□□ -0.24
COL12A1-202ENST00000345356 CTNNA1P35221 906 aaKnown RBP13.54□□□□□ -0.24
COL12A1-202ENST00000345356 STAG1Q8WVM7 1258 aa13.54□□□□□ -0.24
COL12A1-202ENST00000345356 PLIN2Q99541 437 aa13.54□□□□□ -0.24
COL12A1-202ENST00000345356 CABP5Q9NP86 173 aa13.54□□□□□ -0.24
COL12A1-202ENST00000345356 NSFL1CQ9UNZ2 370 aaKnown RBP13.54□□□□□ -0.24
COL12A1-202ENST00000345356 TTC21BQ7Z4L5 1316 aa13.54□□□□□ -0.24
COL12A1-202ENST00000345356 TBCAO75347 108 aaKnown RBP13.54□□□□□ -0.24
COL12A1-202ENST00000345356 SF3B2Q13435 895 aaKnown RBP13.54□□□□□ -0.24
COL12A1-202ENST00000345356 PNOCQ13519 176 aa13.54□□□□□ -0.24
COL12A1-202ENST00000345356 IFIT1BQ5T764 474 aaKnown RBP13.54□□□□□ -0.24
COL12A1-202ENST00000345356 FAM184BQ9ULE4 1060 aa13.54□□□□□ -0.24
COL12A1-202ENST00000345356 LOC102724159A0A0B4J2E5 919 aa13.54□□□□□ -0.24
COL12A1-202ENST00000345356 CCDC151A5D8V7 595 aa13.54□□□□□ -0.24
COL12A1-202ENST00000345356 GRM8O00222 908 aa13.54□□□□□ -0.24
COL12A1-202ENST00000345356 POSTNQ15063 836 aa13.54□□□□□ -0.24
COL12A1-202ENST00000345356 PWP2Q15269 919 aaKnown RBP13.54□□□□□ -0.24
COL12A1-202ENST00000345356 CAVIN4Q5BKX8 364 aa13.54□□□□□ -0.24
COL12A1-202ENST00000345356 CARD14Q9BXL6 1004 aa13.54□□□□□ -0.24
COL12A1-202ENST00000345356 AOX1Q06278 1338 aa13.53□□□□□ -0.24
COL12A1-202ENST00000345356 ARHGEF11O15085 1522 aa13.53□□□□□ -0.24
COL12A1-202ENST00000345356 CEP104O60308 925 aa13.53□□□□□ -0.24
COL12A1-202ENST00000345356 MAGEA1P43355 309 aa13.53□□□□□ -0.24
COL12A1-202ENST00000345356 PAK1Q13153 545 aa13.53□□□□□ -0.24
COL12A1-202ENST00000345356 CCDC174Q6PII3 467 aa13.53□□□□□ -0.24
COL12A1-202ENST00000345356 CROCCP2Q86T23 111 aa13.53□□□□□ -0.24
COL12A1-202ENST00000345356 CCDC51Q96ER9 411 aa13.53□□□□□ -0.24
COL12A1-202ENST00000345356 ANAPC4Q9UJX5 808 aa13.53□□□□□ -0.24
COL12A1-202ENST00000345356 ALDH1L1O75891 902 aa13.53□□□□□ -0.24
COL12A1-202ENST00000345356 RAPGEF1Q13905 1077 aa13.53□□□□□ -0.24
COL12A1-202ENST00000345356 KCTD16Q68DU8 428 aa13.53□□□□□ -0.24
COL12A1-202ENST00000345356 SREK1Q8WXA9 508 aaKnown RBP13.53□□□□□ -0.24
COL12A1-202ENST00000345356 GJC1P36383 396 aa13.53□□□□□ -0.24
COL12A1-202ENST00000345356 RILPL1Q5EBL4 403 aa13.53□□□□□ -0.24
COL12A1-202ENST00000345356 SH2D4BQ5SQS7 431 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms