RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 KIAA1551Q9HCM1 1747 aa29.73■■■□□ 2.35
TRADD-201ENST00000345057 LDHBP07195 334 aaKnown RBP29.73■■■□□ 2.35
TRADD-201ENST00000345057 BAG6P46379 1132 aa29.73■■■□□ 2.35
TRADD-201ENST00000345057 HMGN5P82970 282 aaKnown RBP29.73■■■□□ 2.35
TRADD-201ENST00000345057 MFSD6Q6ZSS7 791 aa29.73■■■□□ 2.35
TRADD-201ENST00000345057 STAG1Q8WVM7 1258 aa29.73■■■□□ 2.35
TRADD-201ENST00000345057 CD209Q9NNX6 404 aa29.73■■■□□ 2.35
TRADD-201ENST00000345057 DHX16O60231 1041 aaKnown RBP29.72■■■□□ 2.35
TRADD-201ENST00000345057 PRDX5P30044 214 aa29.72■■■□□ 2.35
TRADD-201ENST00000345057 SCRN1Q12765 414 aa29.72■■■□□ 2.35
TRADD-201ENST00000345057 FOXD4L5Q5VV16 416 aaPredicted RBP29.72■■■□□ 2.35
TRADD-201ENST00000345057 CHST3Q7LGC8 479 aa29.72■■■□□ 2.35
TRADD-201ENST00000345057 FOXD4L4Q8WXT5 416 aaPredicted RBP29.72■■■□□ 2.35
TRADD-201ENST00000345057 CRNKL1Q9BZJ0 848 aaKnown RBP29.72■■■□□ 2.35
TRADD-201ENST00000345057 PDIA3P30101 505 aaKnown RBP29.72■■■□□ 2.35
TRADD-201ENST00000345057 ANAPC4Q9UJX5 808 aa29.72■■■□□ 2.35
TRADD-201ENST00000345057 F13A1P00488 732 aa29.71■■■□□ 2.35
TRADD-201ENST00000345057 LTBP1Q14766 1721 aa29.71■■■□□ 2.35
TRADD-201ENST00000345057 CERS3Q8IU89 383 aa29.71■■■□□ 2.35
TRADD-201ENST00000345057 ZNF384Q8TF68 577 aa29.71■■■□□ 2.35
TRADD-201ENST00000345057 MTA3Q9BTC8 594 aa29.71■■■□□ 2.35
TRADD-201ENST00000345057 ANGEL1Q9UNK9 670 aaKnown RBP29.71■■■□□ 2.35
TRADD-201ENST00000345057 C6orf229H3BNL8 230 aa29.7■■■□□ 2.35
TRADD-201ENST00000345057 PCP11498 1178 aaKnown RBP29.7■■■□□ 2.35
TRADD-201ENST00000345057 ANTXR2P58335 489 aa29.7■■■□□ 2.35
TRADD-201ENST00000345057 MSL1Q68DK7 614 aa29.7■■■□□ 2.35
TRADD-201ENST00000345057 ANO8Q9HCE9 1232 aaPredicted RBP29.7■■■□□ 2.35
TRADD-201ENST00000345057 SMARCC2Q8TAQ2 1214 aa29.7■■■□□ 2.34
TRADD-201ENST00000345057 TBC1D22AQ8WUA7 517 aa29.7■■■□□ 2.34
TRADD-201ENST00000345057 POLLQ9UGP5 575 aa29.7■■■□□ 2.34
TRADD-201ENST00000345057 MTMR6Q9Y217 621 aa29.7■■■□□ 2.34
TRADD-201ENST00000345057 CHD4Q14839 1912 aa29.69■■■□□ 2.34
TRADD-201ENST00000345057 LDHCP07864 332 aa29.69■■■□□ 2.34
TRADD-201ENST00000345057 PPARAQ07869 468 aa29.69■■■□□ 2.34
TRADD-201ENST00000345057 FAM184AQ8NB25 1140 aa29.69■■■□□ 2.34
TRADD-201ENST00000345057 ATP8A2Q9NTI2 1148 aa29.69■■■□□ 2.34
TRADD-201ENST00000345057 NAP1L2Q9ULW6 460 aaPredicted RBP29.69■■■□□ 2.34
TRADD-201ENST00000345057 SDR42E1Q8WUS8 393 aa29.68■■■□□ 2.34
TRADD-201ENST00000345057 B4E1Z4 1266 aa29.68■■■□□ 2.34
TRADD-201ENST00000345057 DYNLL1P63167 89 aaKnown RBP29.68■■■□□ 2.34
TRADD-201ENST00000345057 KLHL40Q2TBA0 621 aa29.68■■■□□ 2.34
TRADD-201ENST00000345057 MPNDQ8N594 471 aa29.68■■■□□ 2.34
TRADD-201ENST00000345057 LMBRD1Q9NUN5 540 aa29.68■■■□□ 2.34
TRADD-201ENST00000345057 NEDD4P46934 1319 aa29.67■■■□□ 2.34
TRADD-201ENST00000345057 VPS37CA5D8V6 355 aaPredicted RBP29.67■■■□□ 2.34
TRADD-201ENST00000345057 H0YIN7 160 aa29.67■■■□□ 2.34
TRADD-201ENST00000345057 CTDSPL2Q05D32 466 aa29.67■■■□□ 2.34
TRADD-201ENST00000345057 SART3Q15020 963 aaKnown RBP29.67■■■□□ 2.34
TRADD-201ENST00000345057 STYK1Q6J9G0 422 aa29.67■■■□□ 2.34
TRADD-201ENST00000345057 NOL10Q9BSC4 688 aaKnown RBP29.67■■■□□ 2.34
TRADD-201ENST00000345057 KLF18A0A0U1RQI7 1052 aa29.66■■■□□ 2.34
TRADD-201ENST00000345057 SH2B2O14492 632 aaPredicted RBP29.66■■■□□ 2.34
TRADD-201ENST00000345057 BAG3O95817 575 aa29.66■■■□□ 2.34
TRADD-201ENST00000345057 DEKP35659 375 aaKnown RBP29.66■■■□□ 2.34
TRADD-201ENST00000345057 COA1Q9GZY4 146 aa29.66■■■□□ 2.34
TRADD-201ENST00000345057 AATFQ9NY61 560 aaKnown RBP eCLIP29.66■■■□□ 2.34
TRADD-201ENST00000345057 DDX49Q9Y6V7 483 aaKnown RBP29.66■■■□□ 2.34
TRADD-201ENST00000345057 COL11A2P13942 1736 aaPredicted RBP29.66■■■□□ 2.34
TRADD-201ENST00000345057 CYB5R4Q7L1T6 521 aa29.65■■■□□ 2.34
TRADD-201ENST00000345057 SLC51AQ86UW1 340 aa29.65■■■□□ 2.34
TRADD-201ENST00000345057 SLF2Q8IX21 1173 aa29.65■■■□□ 2.34
TRADD-201ENST00000345057 NSUN7Q8NE18 718 aaKnown RBP29.65■■■□□ 2.34
TRADD-201ENST00000345057 GPR101Q96P66 508 aaPredicted RBP29.65■■■□□ 2.34
TRADD-201ENST00000345057 LIFRP42702 1097 aa29.65■■■□□ 2.34
TRADD-201ENST00000345057 GOLGA8BA8MQT2 603 aa29.64■■■□□ 2.34
TRADD-201ENST00000345057 CSPP1Q1MSJ5 1256 aa29.64■■■□□ 2.34
TRADD-201ENST00000345057 DPP8Q6V1X1 898 aaPredicted RBP29.64■■■□□ 2.34
TRADD-201ENST00000345057 C2CD5Q86YS7 1000 aa29.64■■■□□ 2.34
TRADD-201ENST00000345057 PRPF40AO75400 957 aaKnown RBP29.63■■■□□ 2.33
TRADD-201ENST00000345057 CCT2P78371 535 aaKnown RBP29.63■■■□□ 2.33
TRADD-201ENST00000345057 SGMS1Q86VZ5 419 aa29.63■■■□□ 2.33
TRADD-201ENST00000345057 ZC3H12CQ9C0D7 883 aaKnown RBP29.63■■■□□ 2.33
TRADD-201ENST00000345057 JAG2Q9Y219 1238 aa29.63■■■□□ 2.33
TRADD-201ENST00000345057 FAM205AQ6ZU69 1335 aa29.63■■■□□ 2.33
TRADD-201ENST00000345057 PTPDC1A2A3K4 754 aa29.63■■■□□ 2.33
TRADD-201ENST00000345057 MINDY4BA8MYZ0 360 aa29.63■■■□□ 2.33
TRADD-201ENST00000345057 JAK2O60674 1132 aa29.63■■■□□ 2.33
TRADD-201ENST00000345057 KDM4AO75164 1064 aa29.63■■■□□ 2.33
TRADD-201ENST00000345057 EYA3Q99504 573 aa29.63■■■□□ 2.33
TRADD-201ENST00000345057 ARPP21Q9UBL0 812 aaPredicted RBP29.63■■■□□ 2.33
TRADD-201ENST00000345057 ERICH2A1L162 156 aa29.62■■■□□ 2.33
TRADD-201ENST00000345057 SLC3A2P08195 630 aaKnown RBP29.62■■■□□ 2.33
TRADD-201ENST00000345057 NT5C2P49902 561 aa29.62■■■□□ 2.33
TRADD-201ENST00000345057 TMTC2Q8N394 836 aa29.62■■■□□ 2.33
TRADD-201ENST00000345057 ESR2Q92731 530 aa29.62■■■□□ 2.33
TRADD-201ENST00000345057 ZNF622Q969S3 477 aaKnown RBP eCLIP29.62■■■□□ 2.33
TRADD-201ENST00000345057 TOMM22Q9NS69 142 aa29.62■■■□□ 2.33
TRADD-201ENST00000345057 ZSWIM5Q9P217 1185 aa29.62■■■□□ 2.33
TRADD-201ENST00000345057 BRPF3Q9ULD4 1205 aa29.62■■■□□ 2.33
TRADD-201ENST00000345057 PPP4CP60510 307 aa29.61■■■□□ 2.33
TRADD-201ENST00000345057 TMEM67Q5HYA8 995 aa29.61■■■□□ 2.33
TRADD-201ENST00000345057 IGDCC4Q8TDY8 1250 aa29.61■■■□□ 2.33
TRADD-201ENST00000345057 SUGT1Q9Y2Z0 365 aa29.61■■■□□ 2.33
TRADD-201ENST00000345057 MBD3O95983 291 aa29.61■■■□□ 2.33
TRADD-201ENST00000345057 GPHNQ9NQX3 736 aaPredicted RBP29.61■■■□□ 2.33
TRADD-201ENST00000345057 H3BQV1 296 aa29.6■■■□□ 2.33
TRADD-201ENST00000345057 CPLX1O14810 134 aa29.6■■■□□ 2.33
TRADD-201ENST00000345057 IFIT3O14879 490 aaKnown RBP29.6■■■□□ 2.33
TRADD-201ENST00000345057 NCLP19338 710 aaKnown RBP29.6■■■□□ 2.33
TRADD-201ENST00000345057 SBK1Q52WX2 424 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms