RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 APLP1P51693 650 aa25.26■■□□□ 1.63
SMARCB1-202ENST00000344921 CACNB3P54284 484 aa25.26■■□□□ 1.63
SMARCB1-202ENST00000344921 CCDC136Q96JN2 1154 aa25.26■■□□□ 1.63
SMARCB1-202ENST00000344921 DEFB129Q9H1M3 183 aa25.26■■□□□ 1.63
SMARCB1-202ENST00000344921 SALL3Q9BXA9 1300 aa25.25■■□□□ 1.63
SMARCB1-202ENST00000344921 HSPA6P17066 643 aa25.25■■□□□ 1.63
SMARCB1-202ENST00000344921 CYP7A1P22680 504 aa25.25■■□□□ 1.63
SMARCB1-202ENST00000344921 TNNI2P48788 182 aa25.25■■□□□ 1.63
SMARCB1-202ENST00000344921 PDE1AP54750 535 aa25.25■■□□□ 1.63
SMARCB1-202ENST00000344921 CDC42EP5Q6NZY7 148 aa25.25■■□□□ 1.63
SMARCB1-202ENST00000344921 PI4K2BQ8TCG2 481 aa25.25■■□□□ 1.63
SMARCB1-202ENST00000344921 MAST2Q6P0Q8 1798 aa25.25■■□□□ 1.63
SMARCB1-202ENST00000344921 CELF2O95319 508 aaKnown RBP25.24■■□□□ 1.63
SMARCB1-202ENST00000344921 MAP4K4O95819 1239 aaPredicted RBP25.24■■□□□ 1.63
SMARCB1-202ENST00000344921 SLC9C2Q5TAH2 1124 aa25.24■■□□□ 1.63
SMARCB1-202ENST00000344921 PRAMEF18Q5VWM3 479 aa25.24■■□□□ 1.63
SMARCB1-202ENST00000344921 GPR75-ASB3A0A0A6YYF3 556 aa25.23■■□□□ 1.63
SMARCB1-202ENST00000344921 CDCA5Q96FF9 252 aa25.23■■□□□ 1.63
SMARCB1-202ENST00000344921 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.23■■□□□ 1.63
SMARCB1-202ENST00000344921 DOCK2Q92608 1830 aa25.23■■□□□ 1.63
SMARCB1-202ENST00000344921 BAG3O95817 575 aa25.23■■□□□ 1.63
SMARCB1-202ENST00000344921 RASA3Q14644 834 aa25.23■■□□□ 1.63
SMARCB1-202ENST00000344921 AATFQ9NY61 560 aaKnown RBP eCLIP25.23■■□□□ 1.63
SMARCB1-202ENST00000344921 STAP2Q9UGK3 403 aa25.23■■□□□ 1.63
SMARCB1-202ENST00000344921 TMEM88BA6NKF7 163 aa25.21■■□□□ 1.63
SMARCB1-202ENST00000344921 CENPQQ7L2Z9 268 aaPredicted RBP25.21■■□□□ 1.63
SMARCB1-202ENST00000344921 PPP2R3BQ9Y5P8 575 aa25.21■■□□□ 1.63
SMARCB1-202ENST00000344921 TRPM7Q96QT4 1865 aa25.21■■□□□ 1.63
SMARCB1-202ENST00000344921 NF2P35240 595 aa25.2■■□□□ 1.63
SMARCB1-202ENST00000344921 ADGRA1Q86SQ6 560 aa25.2■■□□□ 1.63
SMARCB1-202ENST00000344921 PDE6AP16499 860 aa25.2■■□□□ 1.62
SMARCB1-202ENST00000344921 CST9Q5W186 159 aa25.2■■□□□ 1.62
SMARCB1-202ENST00000344921 TMED8Q6PL24 325 aaPredicted RBP25.2■■□□□ 1.62
SMARCB1-202ENST00000344921 PLEKHM2Q8IWE5 1019 aa25.2■■□□□ 1.62
SMARCB1-202ENST00000344921 MIGA1Q8NAN2 632 aa25.2■■□□□ 1.62
SMARCB1-202ENST00000344921 TCP10Q12799 353 aa25.19■■□□□ 1.62
SMARCB1-202ENST00000344921 FKBP1CQ5VVH2 108 aa25.19■■□□□ 1.62
SMARCB1-202ENST00000344921 ZSCAN25Q6NSZ9 544 aa25.19■■□□□ 1.62
SMARCB1-202ENST00000344921 ZNF532Q9HCE3 1301 aa25.19■■□□□ 1.62
SMARCB1-202ENST00000344921 PLCG2P16885 1265 aa25.18■■□□□ 1.62
SMARCB1-202ENST00000344921 KBTBD3Q8NAB2 608 aa25.18■■□□□ 1.62
SMARCB1-202ENST00000344921 TMEM39BQ9GZU3 492 aa25.18■■□□□ 1.62
SMARCB1-202ENST00000344921 HTRA3P83110 453 aa25.17■■□□□ 1.62
SMARCB1-202ENST00000344921 NFIAQ12857 509 aa25.17■■□□□ 1.62
SMARCB1-202ENST00000344921 PICALMQ13492 652 aa25.17■■□□□ 1.62
SMARCB1-202ENST00000344921 ERICH6BQ5W0A0 696 aa25.17■■□□□ 1.62
SMARCB1-202ENST00000344921 FAM83AQ86UY5 434 aa25.17■■□□□ 1.62
SMARCB1-202ENST00000344921 CREBZFQ9NS37 354 aa25.17■■□□□ 1.62
SMARCB1-202ENST00000344921 ABT1Q9ULW3 272 aaKnown RBP25.17■■□□□ 1.62
SMARCB1-202ENST00000344921 RHBDL3P58872 404 aa25.17■■□□□ 1.62
SMARCB1-202ENST00000344921 TEX11Q8IYF3 940 aa25.17■■□□□ 1.62
SMARCB1-202ENST00000344921 C2orf69Q8N8R5 385 aa25.17■■□□□ 1.62
SMARCB1-202ENST00000344921 SH3RF3Q8TEJ3 882 aaPredicted RBP25.17■■□□□ 1.62
SMARCB1-202ENST00000344921 ADD2P35612 726 aa25.16■■□□□ 1.62
SMARCB1-202ENST00000344921 DYNLL1P63167 89 aaKnown RBP25.16■■□□□ 1.62
SMARCB1-202ENST00000344921 TTLL12Q14166 644 aaPredicted RBP25.16■■□□□ 1.62
SMARCB1-202ENST00000344921 SUPT20HL1Q3ZLR7 823 aa25.16■■□□□ 1.62
SMARCB1-202ENST00000344921 FSD1Q9BTV5 496 aa25.16■■□□□ 1.62
SMARCB1-202ENST00000344921 GBA2Q9HCG7 927 aaPredicted RBP25.16■■□□□ 1.62
SMARCB1-202ENST00000344921 CNTNAP1P78357 1384 aa25.15■■□□□ 1.62
SMARCB1-202ENST00000344921 TRIM6-TRIM34B2RNG4 842 aa25.15■■□□□ 1.62
SMARCB1-202ENST00000344921 PDE4AP27815 886 aa25.15■■□□□ 1.62
SMARCB1-202ENST00000344921 RGS3P49796 1198 aa25.15■■□□□ 1.62
SMARCB1-202ENST00000344921 PPP4CP60510 307 aa25.15■■□□□ 1.62
SMARCB1-202ENST00000344921 LRRFIP1Q32MZ4 808 aaKnown RBP25.15■■□□□ 1.62
SMARCB1-202ENST00000344921 NBPF12Q5TAG4 269 aaPredicted RBP25.15■■□□□ 1.62
SMARCB1-202ENST00000344921 IDI2Q9BXS1 227 aa25.15■■□□□ 1.62
SMARCB1-202ENST00000344921 OSBPL3Q9H4L5 887 aa25.15■■□□□ 1.62
SMARCB1-202ENST00000344921 PRKG1Q13976 671 aa25.15■■□□□ 1.62
SMARCB1-202ENST00000344921 CERS3Q8IU89 383 aa25.15■■□□□ 1.62
SMARCB1-202ENST00000344921 FAM151AQ8WW52 585 aa25.15■■□□□ 1.62
SMARCB1-202ENST00000344921 FAM198AQ9UFP1 575 aa25.15■■□□□ 1.62
SMARCB1-202ENST00000344921 MYH7P12883 1935 aa25.14■■□□□ 1.62
SMARCB1-202ENST00000344921 MAGEB6P1A0A0J9YX57 407 aa25.14■■□□□ 1.61
SMARCB1-202ENST00000344921 TCRBV5S4A2TA0A5A2 114 aa25.14■■□□□ 1.61
SMARCB1-202ENST00000344921 WDHD1O75717 1129 aaPredicted RBP25.14■■□□□ 1.61
SMARCB1-202ENST00000344921 SLFNL1Q499Z3 407 aa25.14■■□□□ 1.61
SMARCB1-202ENST00000344921 EVI5LQ96CN4 794 aa25.14■■□□□ 1.61
SMARCB1-202ENST00000344921 PPP4R2Q9NY27 417 aa25.14■■□□□ 1.61
SMARCB1-202ENST00000344921 AK9Q5TCS8 1911 aa25.13■■□□□ 1.61
SMARCB1-202ENST00000344921 UBE3CQ15386 1083 aa25.13■■□□□ 1.61
SMARCB1-202ENST00000344921 ZSCAN29Q8IWY8 852 aaPredicted RBP25.13■■□□□ 1.61
SMARCB1-202ENST00000344921 RILPL2Q969X0 211 aa25.13■■□□□ 1.61
SMARCB1-202ENST00000344921 ENTPD3O75355 529 aa25.12■■□□□ 1.61
SMARCB1-202ENST00000344921 CHGBP05060 677 aa25.12■■□□□ 1.61
SMARCB1-202ENST00000344921 CDAN1Q8IWY9 1227 aa25.12■■□□□ 1.61
SMARCB1-202ENST00000344921 DDX4Q9NQI0 724 aaKnown RBP25.12■■□□□ 1.61
SMARCB1-202ENST00000344921 ZFYP08048 801 aaPredicted RBP25.12■■□□□ 1.61
SMARCB1-202ENST00000344921 TGFBRAP1Q8WUH2 860 aa25.12■■□□□ 1.61
SMARCB1-202ENST00000344921 TEPSINQ96N21 525 aa25.12■■□□□ 1.61
SMARCB1-202ENST00000344921 RNF113AO15541 343 aaKnown RBP25.11■■□□□ 1.61
SMARCB1-202ENST00000344921 PPP1R12BO60237 982 aaPredicted RBP25.11■■□□□ 1.61
SMARCB1-202ENST00000344921 ZFPM1Q8IX07 1006 aa25.11■■□□□ 1.61
SMARCB1-202ENST00000344921 USP5P45974 858 aa25.1■■□□□ 1.61
SMARCB1-202ENST00000344921 HUNKP57058 714 aa25.1■■□□□ 1.61
SMARCB1-202ENST00000344921 RIOK1Q9BRS2 568 aaKnown RBP25.1■■□□□ 1.61
SMARCB1-202ENST00000344921 FZD1Q9UP38 647 aa25.1■■□□□ 1.61
SMARCB1-202ENST00000344921 TLL2Q9Y6L7 1015 aa25.1■■□□□ 1.61
SMARCB1-202ENST00000344921 FKBP1BP68106 108 aa25.09■■□□□ 1.61
SMARCB1-202ENST00000344921 PAXIP1Q6ZW49 1069 aaPredicted RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms