RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 IGF2BP3O00425 579 aaKnown RBP eCLIP22.2■■□□□ 1.14
USF2-202ENST00000343550 GJA5P36382 358 aa22.2■■□□□ 1.14
USF2-202ENST00000343550 PHKA1P46020 1223 aa22.2■■□□□ 1.14
USF2-202ENST00000343550 CCDC102BQ68D86 513 aa22.2■■□□□ 1.14
USF2-202ENST00000343550 GPR108Q9NPR9 543 aa22.2■■□□□ 1.14
USF2-202ENST00000343550 GNL3LQ9NVN8 582 aaKnown RBP22.2■■□□□ 1.14
USF2-202ENST00000343550 ZDHHC15Q96MV8 337 aa22.19■■□□□ 1.14
USF2-202ENST00000343550 SUGT1Q9Y2Z0 365 aa22.19■■□□□ 1.14
USF2-202ENST00000343550 ARAP2Q8WZ64 1704 aa22.18■■□□□ 1.14
USF2-202ENST00000343550 HMMRO75330 724 aa22.18■■□□□ 1.14
USF2-202ENST00000343550 ELP3Q9H9T3 547 aa22.18■■□□□ 1.14
USF2-202ENST00000343550 EXOC6BQ9Y2D4 811 aa22.18■■□□□ 1.14
USF2-202ENST00000343550 ZBTB22O15209 634 aa22.17■■□□□ 1.14
USF2-202ENST00000343550 OTUD7BQ6GQQ9 843 aa22.17■■□□□ 1.14
USF2-202ENST00000343550 OPTNQ96CV9 577 aa22.17■■□□□ 1.14
USF2-202ENST00000343550 MAST3O60307 1309 aa22.16■■□□□ 1.14
USF2-202ENST00000343550 CACNB3P54284 484 aa22.16■■□□□ 1.14
USF2-202ENST00000343550 TNNI3KQ59H18 835 aa22.16■■□□□ 1.14
USF2-202ENST00000343550 APOBEC3HQ6NTF7 200 aaKnown RBP22.16■■□□□ 1.14
USF2-202ENST00000343550 FBXO46Q6PJ61 603 aaPredicted RBP22.16■■□□□ 1.14
USF2-202ENST00000343550 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.16■■□□□ 1.14
USF2-202ENST00000343550 FPGT-TNNI3KV9GXZ4 949 aa22.16■■□□□ 1.14
USF2-202ENST00000343550 TESPA1A2RU30 521 aaPredicted RBP22.16■■□□□ 1.14
USF2-202ENST00000343550 SEMA3EO15041 775 aa22.16■■□□□ 1.14
USF2-202ENST00000343550 MAP3K9P80192 1104 aa22.16■■□□□ 1.14
USF2-202ENST00000343550 HSP90AB4PQ58FF6 505 aa22.16■■□□□ 1.14
USF2-202ENST00000343550 WDR66Q8TBY9 1149 aa22.16■■□□□ 1.14
USF2-202ENST00000343550 TMOD2Q9NZR1 351 aa22.16■■□□□ 1.14
USF2-202ENST00000343550 HHIPL2Q6UWX4 724 aa22.15■■□□□ 1.14
USF2-202ENST00000343550 ERC1Q8IUD2 1116 aa22.15■■□□□ 1.14
USF2-202ENST00000343550 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.15■■□□□ 1.142e-7■■□□□ 12
USF2-202ENST00000343550 PTPN18Q99952 460 aa22.15■■□□□ 1.14
USF2-202ENST00000343550 DENND2AQ9ULE3 1009 aa22.15■■□□□ 1.14
USF2-202ENST00000343550 VGLL4Q14135 290 aa22.14■■□□□ 1.13
USF2-202ENST00000343550 GORABQ5T7V8 394 aa22.14■■□□□ 1.13
USF2-202ENST00000343550 FKBP1CQ5VVH2 108 aa22.14■■□□□ 1.13
USF2-202ENST00000343550 FAM83AQ86UY5 434 aa22.14■■□□□ 1.13
USF2-202ENST00000343550 CRBNQ96SW2 442 aa22.14■■□□□ 1.13
USF2-202ENST00000343550 CRHR2Q13324 411 aa22.13■■□□□ 1.13
USF2-202ENST00000343550 CNKSR2Q8WXI2 1034 aa22.13■■□□□ 1.13
USF2-202ENST00000343550 EAF2Q96CJ1 260 aaPredicted RBP22.13■■□□□ 1.13
USF2-202ENST00000343550 MS4A4AQ96JQ5 239 aa22.13■■□□□ 1.13
USF2-202ENST00000343550 SUPT16HQ9Y5B9 1047 aaKnown RBP22.13■■□□□ 1.13
USF2-202ENST00000343550 CSADQ9Y600 493 aa22.13■■□□□ 1.13
USF2-202ENST00000343550 RASGRF1Q13972 1273 aa22.12■■□□□ 1.13
USF2-202ENST00000343550 RHPN1Q8TCX5 695 aa22.12■■□□□ 1.13
USF2-202ENST00000343550 DBNDD2Q9BQY9 259 aa22.11■■□□□ 1.13
USF2-202ENST00000343550 PCDHB15Q9Y5E8 787 aa22.11■■□□□ 1.13
USF2-202ENST00000343550 LAMB1P07942 1786 aa22.11■■□□□ 1.13
USF2-202ENST00000343550 RAB11FIP3O75154 756 aa22.11■■□□□ 1.13
USF2-202ENST00000343550 HOOK2Q96ED9 719 aa22.11■■□□□ 1.13
USF2-202ENST00000343550 CCDC8Q9H0W5 538 aaPredicted RBP22.11■■□□□ 1.13
USF2-202ENST00000343550 TRIM17Q9Y577 477 aa22.11■■□□□ 1.13
USF2-202ENST00000343550 TNRC18O15417 2968 aaPredicted RBP22.1■■□□□ 1.13
USF2-202ENST00000343550 SALL1Q9NSC2 1324 aa22.1■■□□□ 1.13
USF2-202ENST00000343550 ARID4AP29374 1257 aaPredicted RBP22.1■■□□□ 1.13
USF2-202ENST00000343550 GTF2A2P52657 109 aa22.1■■□□□ 1.13
USF2-202ENST00000343550 OTOP1Q7RTM1 612 aa22.1■■□□□ 1.13
USF2-202ENST00000343550 KIF1BPQ96EK5 621 aa22.1■■□□□ 1.13
USF2-202ENST00000343550 OTUD5Q96G74 571 aa22.1■■□□□ 1.13
USF2-202ENST00000343550 ERO1AQ96HE7 468 aa22.1■■□□□ 1.13
USF2-202ENST00000343550 MYH13Q9UKX3 1938 aa22.09■■□□□ 1.13
USF2-202ENST00000343550 PDS5AQ29RF7 1337 aaKnown RBP22.09■■□□□ 1.13
USF2-202ENST00000343550 OTOFQ9HC10 1997 aa22.09■■□□□ 1.13
USF2-202ENST00000343550 APBB1O00213 710 aa22.09■■□□□ 1.13
USF2-202ENST00000343550 CCDC158Q5M9N0 1113 aa22.09■■□□□ 1.13
USF2-202ENST00000343550 BRI3BPQ8WY22 251 aa22.09■■□□□ 1.13
USF2-202ENST00000343550 IL1RAPL2Q9NP60 686 aa22.09■■□□□ 1.13
USF2-202ENST00000343550 HMG20BQ9P0W2 317 aa22.09■■□□□ 1.13
USF2-202ENST00000343550 DBNLQ9UJU6 430 aaKnown RBP22.09■■□□□ 1.13
USF2-202ENST00000343550 CCL15-CCL14A0A0B4J2E2 113 aa22.08■■□□□ 1.13
USF2-202ENST00000343550 UQCRFS1P1P0C7P4 283 aa22.08■■□□□ 1.13
USF2-202ENST00000343550 CCL15Q16663 113 aa22.08■■□□□ 1.13
USF2-202ENST00000343550 SPATA5Q8NB90 893 aa22.08■■□□□ 1.13
USF2-202ENST00000343550 WRNIP1Q96S55 665 aa22.08■■□□□ 1.13
USF2-202ENST00000343550 TLR7Q9NYK1 1049 aaKnown RBP22.08■■□□□ 1.13
USF2-202ENST00000343550 DAGLAQ9Y4D2 1042 aa22.08■■□□□ 1.13
USF2-202ENST00000343550 SPDYE5A6NIY4 337 aa22.07■■□□□ 1.12
USF2-202ENST00000343550 LDHBP07195 334 aaKnown RBP22.07■■□□□ 1.12
USF2-202ENST00000343550 PRDX5P30044 214 aa22.07■■□□□ 1.12
USF2-202ENST00000343550 SP3Q02447 781 aa22.07■■□□□ 1.12
USF2-202ENST00000343550 DIXDC1Q155Q3 683 aa22.07■■□□□ 1.12
USF2-202ENST00000343550 CD99L2Q8TCZ2 262 aa22.07■■□□□ 1.12
USF2-202ENST00000343550 ZKSCAN4Q969J2 545 aaPredicted RBP22.07■■□□□ 1.12
USF2-202ENST00000343550 SNCAIPQ9Y6H5 919 aa22.07■■□□□ 1.12
USF2-202ENST00000343550 MCAMP43121 646 aa22.06■■□□□ 1.12
USF2-202ENST00000343550 TTC39AQ5SRH9 613 aa22.06■■□□□ 1.12
USF2-202ENST00000343550 DCAF15Q66K64 600 aa22.06■■□□□ 1.12
USF2-202ENST00000343550 CDC42EP5Q6NZY7 148 aa22.06■■□□□ 1.12
USF2-202ENST00000343550 PI16Q6UXB8 463 aa22.06■■□□□ 1.12
USF2-202ENST00000343550 AACSQ86V21 672 aa22.06■■□□□ 1.12
USF2-202ENST00000343550 ERO1BQ86YB8 467 aa22.06■■□□□ 1.12
USF2-202ENST00000343550 ZGPATQ8N5A5 531 aaKnown RBP22.06■■□□□ 1.12
USF2-202ENST00000343550 FAM151AQ8WW52 585 aa22.06■■□□□ 1.12
USF2-202ENST00000343550 ZNF512BQ96KM6 892 aaPredicted RBP22.06■■□□□ 1.12
USF2-202ENST00000343550 DCTPP1Q9H773 170 aa22.06■■□□□ 1.12
USF2-202ENST00000343550 RPAP1Q9BWH6 1393 aaPredicted RBP22.06■■□□□ 1.12
USF2-202ENST00000343550 MIGA2Q7L4E1 593 aa22.06■■□□□ 1.12
USF2-202ENST00000343550 CLASRPQ8N2M8 674 aaKnown RBP22.06■■□□□ 1.12
USF2-202ENST00000343550 TAF1CQ15572 869 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms