RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 AK7Q96M32 723 aa16.92■□□□□ 0.3
TDP2-201ENST00000341060 KIAA1468Q9P260 1216 aa16.92■□□□□ 0.3
TDP2-201ENST00000341060 WWC3Q9ULE0 1092 aa16.92■□□□□ 0.3
TDP2-201ENST00000341060 A0A087WWV3 80 aa16.91■□□□□ 0.3
TDP2-201ENST00000341060 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.91■□□□□ 0.3
TDP2-201ENST00000341060 NKX2-3Q8TAU0 364 aa16.91■□□□□ 0.3
TDP2-201ENST00000341060 ERCC4Q92889 916 aaPredicted RBP16.91■□□□□ 0.3
TDP2-201ENST00000341060 TMEM87BQ96K49 555 aa16.91■□□□□ 0.3
TDP2-201ENST00000341060 SPATA31A1Q5TZJ5 1347 aa16.91■□□□□ 0.3
TDP2-201ENST00000341060 NEMFO60524 1076 aa16.91■□□□□ 0.3
TDP2-201ENST00000341060 ALX1Q15699 326 aa16.91■□□□□ 0.3
TDP2-201ENST00000341060 LRRC8AQ8IWT6 810 aa16.91■□□□□ 0.3
TDP2-201ENST00000341060 AOPEPQ8N6M6 819 aa16.91■□□□□ 0.3
TDP2-201ENST00000341060 AIDAQ96BJ3 306 aa16.91■□□□□ 0.3
TDP2-201ENST00000341060 STRBPQ96SI9 672 aaKnown RBP16.91■□□□□ 0.3
TDP2-201ENST00000341060 BPIFA3Q9BQP9 254 aa16.91■□□□□ 0.3
TDP2-201ENST00000341060 RREB1Q92766 1687 aa16.91■□□□□ 0.3
TDP2-201ENST00000341060 MYH6P13533 1939 aa16.91■□□□□ 0.3
TDP2-201ENST00000341060 SPATA31A6Q5VVP1 1343 aa16.91■□□□□ 0.3
TDP2-201ENST00000341060 B4E1Z4 1266 aa16.9■□□□□ 0.3
TDP2-201ENST00000341060 AXDND1Q5T1B0 1012 aaPredicted RBP16.9■□□□□ 0.3
TDP2-201ENST00000341060 NRAPQ86VF7 1730 aa16.9■□□□□ 0.3
TDP2-201ENST00000341060 RIOK3O14730 519 aaKnown RBP16.9■□□□□ 0.3
TDP2-201ENST00000341060 CMA1P23946 247 aa16.9■□□□□ 0.3
TDP2-201ENST00000341060 SGMS1Q86VZ5 419 aa16.9■□□□□ 0.3
TDP2-201ENST00000341060 SPATA5Q8NB90 893 aa16.9■□□□□ 0.3
TDP2-201ENST00000341060 IGDCC4Q8TDY8 1250 aa16.9■□□□□ 0.3
TDP2-201ENST00000341060 ALG1Q9BT22 464 aa16.9■□□□□ 0.3
TDP2-201ENST00000341060 CICQ96RK0 1608 aaPredicted RBP16.89■□□□□ 0.29
TDP2-201ENST00000341060 ZNF202O95125 648 aa16.89■□□□□ 0.29
TDP2-201ENST00000341060 CDC27P30260 824 aa16.89■□□□□ 0.29
TDP2-201ENST00000341060 SLC39A14Q15043 492 aa16.89■□□□□ 0.29
TDP2-201ENST00000341060 CPLX2Q6PUV4 134 aaKnown RBP16.89■□□□□ 0.29
TDP2-201ENST00000341060 VPS37DQ86XT2 251 aa16.89■□□□□ 0.29
TDP2-201ENST00000341060 ZNF710Q8N1W2 664 aa16.89■□□□□ 0.29
TDP2-201ENST00000341060 AIFM3Q96NN9 605 aa16.89■□□□□ 0.29
TDP2-201ENST00000341060 SPATA31A5Q5VU36 1347 aa16.89■□□□□ 0.29
TDP2-201ENST00000341060 SPATA31A7Q8IWB4 1347 aa16.89■□□□□ 0.29
TDP2-201ENST00000341060 A0A1B0GUL6 1792 aa16.89■□□□□ 0.29
TDP2-201ENST00000341060 CASZ1Q86V15 1759 aa16.89■□□□□ 0.29
TDP2-201ENST00000341060 SLC5A1P13866 664 aa16.88■□□□□ 0.29
TDP2-201ENST00000341060 ZRSR1Q15695 479 aaKnown RBP16.88■□□□□ 0.29
TDP2-201ENST00000341060 DPCR1Q3MIW9 517 aa16.88■□□□□ 0.29
TDP2-201ENST00000341060 MEX3CQ5U5Q3 659 aaKnown RBP16.88■□□□□ 0.29
TDP2-201ENST00000341060 MICU3Q86XE3 530 aa16.88■□□□□ 0.29
TDP2-201ENST00000341060 TSC1Q92574 1164 aa16.88■□□□□ 0.29
TDP2-201ENST00000341060 SYTL4Q96C24 671 aaPredicted RBP16.88■□□□□ 0.29
TDP2-201ENST00000341060 C16orf45Q96MC5 204 aaPredicted RBP16.88■□□□□ 0.29
TDP2-201ENST00000341060 LY9Q9HBG7 655 aa16.88■□□□□ 0.29
TDP2-201ENST00000341060 MROH7-TTC4A0A0A0MT08 1334 aa16.88■□□□□ 0.29
TDP2-201ENST00000341060 MYH14Q7Z406 1995 aaKnown RBP16.88■□□□□ 0.29
TDP2-201ENST00000341060 PATL2C9JE40 543 aaKnown RBP16.88■□□□□ 0.29
TDP2-201ENST00000341060 EXOC5O00471 708 aa16.88■□□□□ 0.29
TDP2-201ENST00000341060 ZBTB43O43298 467 aa16.88■□□□□ 0.29
TDP2-201ENST00000341060 PFKFB1P16118 471 aa16.88■□□□□ 0.29
TDP2-201ENST00000341060 RXRAP19793 462 aa16.88■□□□□ 0.29
TDP2-201ENST00000341060 LIFRP42702 1097 aa16.88■□□□□ 0.29
TDP2-201ENST00000341060 RBM6P78332 1123 aaKnown RBP16.88■□□□□ 0.29
TDP2-201ENST00000341060 RASGRF1Q13972 1273 aa16.88■□□□□ 0.29
TDP2-201ENST00000341060 NTRK3Q16288 839 aa16.88■□□□□ 0.29
TDP2-201ENST00000341060 KRT40Q6A162 431 aa16.88■□□□□ 0.29
TDP2-201ENST00000341060 HELBQ8NG08 1087 aaPredicted RBP16.88■□□□□ 0.29
TDP2-201ENST00000341060 SENP2Q9HC62 589 aa16.88■□□□□ 0.29
TDP2-201ENST00000341060 EPB41L4AQ9HCS5 686 aaPredicted RBP16.88■□□□□ 0.29
TDP2-201ENST00000341060 CTIFO43310 598 aaKnown RBP16.87■□□□□ 0.29
TDP2-201ENST00000341060 SLC3A2P08195 630 aaKnown RBP16.87■□□□□ 0.29
TDP2-201ENST00000341060 MAP3K12Q12852 859 aa16.87■□□□□ 0.29
TDP2-201ENST00000341060 IFNL3Q8IZI9 196 aa16.87■□□□□ 0.29
TDP2-201ENST00000341060 BCL2L12Q9HB09 334 aa16.87■□□□□ 0.29
TDP2-201ENST00000341060 BCL9LQ86UU0 1499 aa16.87■□□□□ 0.29
TDP2-201ENST00000341060 NID2Q14112 1375 aa16.87■□□□□ 0.29
TDP2-201ENST00000341060 PPP6R2O75170 966 aa16.87■□□□□ 0.29
TDP2-201ENST00000341060 WDHD1O75717 1129 aaPredicted RBP16.87■□□□□ 0.29
TDP2-201ENST00000341060 EIF5P55010 431 aaKnown RBP16.87■□□□□ 0.29
TDP2-201ENST00000341060 MAGEB6Q8N7X4 407 aa16.87■□□□□ 0.29
TDP2-201ENST00000341060 PHKBQ93100 1093 aa16.87■□□□□ 0.29
TDP2-201ENST00000341060 TIGD1Q96MW7 591 aa16.87■□□□□ 0.29
TDP2-201ENST00000341060 NAPBQ9H115 298 aa16.87■□□□□ 0.29
TDP2-201ENST00000341060 U2AF2P26368 475 aaKnown RBP eCLIP16.86■□□□□ 0.29
TDP2-201ENST00000341060 TMEM67Q5HYA8 995 aa16.86■□□□□ 0.29
TDP2-201ENST00000341060 FBXW7Q969H0 707 aa16.86■□□□□ 0.29
TDP2-201ENST00000341060 CNNM2Q9H8M5 875 aa16.86■□□□□ 0.29
TDP2-201ENST00000341060 USP21Q9UK80 565 aa16.86■□□□□ 0.29
TDP2-201ENST00000341060 THRAP3Q9Y2W1 955 aaKnown RBP16.86■□□□□ 0.29
TDP2-201ENST00000341060 STK36Q9NRP7 1315 aa16.86■□□□□ 0.29
TDP2-201ENST00000341060 GOLGA8AA7E2F4 631 aa16.85■□□□□ 0.29
TDP2-201ENST00000341060 RANBP6O60518 1105 aaKnown RBP16.85■□□□□ 0.29
TDP2-201ENST00000341060 MBD4O95243 580 aa16.85■□□□□ 0.29
TDP2-201ENST00000341060 IARSP41252 1262 aaKnown RBP16.85■□□□□ 0.29
TDP2-201ENST00000341060 NLRP12P59046 1061 aa16.85■□□□□ 0.29
TDP2-201ENST00000341060 NFXL1Q6ZNB6 911 aa16.85■□□□□ 0.29
TDP2-201ENST00000341060 FNBP4Q8N3X1 1017 aaPredicted RBP16.85■□□□□ 0.29
TDP2-201ENST00000341060 JMYQ8N9B5 988 aa16.85■□□□□ 0.29
TDP2-201ENST00000341060 MPHOSPH8Q99549 860 aa16.85■□□□□ 0.29
TDP2-201ENST00000341060 FAM217BQ9NTX9 383 aaPredicted RBP16.85■□□□□ 0.29
TDP2-201ENST00000341060 TNNT1P13805 278 aa16.85■□□□□ 0.29
TDP2-201ENST00000341060 MARCKSP29966 332 aaPredicted RBP16.85■□□□□ 0.29
TDP2-201ENST00000341060 ARID5BQ14865 1188 aa16.85■□□□□ 0.29
TDP2-201ENST00000341060 PTPAQ15257 358 aa16.85■□□□□ 0.29
TDP2-201ENST00000341060 FAM98CQ17RN3 349 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms