RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 CDC42EP5Q6NZY7 148 aa16.03■□□□□ 0.16
TUBD1-202ENST00000340993 PLEKHM2Q8IWE5 1019 aa16.03■□□□□ 0.16
TUBD1-202ENST00000340993 CDAN1Q8IWY9 1227 aa16.03■□□□□ 0.16
TUBD1-202ENST00000340993 TRPM7Q96QT4 1865 aa16.03■□□□□ 0.16
TUBD1-202ENST00000340993 ITGBL1O95965 494 aaPredicted RBP16.03■□□□□ 0.16
TUBD1-202ENST00000340993 MAP3K12Q12852 859 aa16.03■□□□□ 0.16
TUBD1-202ENST00000340993 NFIAQ12857 509 aa16.03■□□□□ 0.16
TUBD1-202ENST00000340993 SLC4A8Q2Y0W8 1093 aa16.03■□□□□ 0.16
TUBD1-202ENST00000340993 SPDYE2Q495Y8 402 aa16.03■□□□□ 0.16
TUBD1-202ENST00000340993 HHIPL2Q6UWX4 724 aa16.03■□□□□ 0.16
TUBD1-202ENST00000340993 CDC37L1Q7L3B6 337 aa16.03■□□□□ 0.16
TUBD1-202ENST00000340993 ZC3H15Q8WU90 426 aaKnown RBP16.03■□□□□ 0.16
TUBD1-202ENST00000340993 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.03■□□□□ 0.16
TUBD1-202ENST00000340993 TTC41PQ6P2S7 1318 aa16.02■□□□□ 0.16
TUBD1-202ENST00000340993 TRIM6-TRIM34B2RNG4 842 aa16.02■□□□□ 0.15
TUBD1-202ENST00000340993 GLRX3O76003 335 aaKnown RBP16.02■□□□□ 0.15
TUBD1-202ENST00000340993 CELF2O95319 508 aaKnown RBP16.02■□□□□ 0.15
TUBD1-202ENST00000340993 PDE6AP16499 860 aa16.02■□□□□ 0.15
TUBD1-202ENST00000340993 GSTO1P78417 241 aa16.02■□□□□ 0.15
TUBD1-202ENST00000340993 FSTL1Q12841 308 aa16.02■□□□□ 0.15
TUBD1-202ENST00000340993 TTF1Q15361 905 aaPredicted RBP16.02■□□□□ 0.15
TUBD1-202ENST00000340993 MTMR14Q8NCE2 650 aa16.02■□□□□ 0.15
TUBD1-202ENST00000340993 RILPL2Q969X0 211 aa16.02■□□□□ 0.15
TUBD1-202ENST00000340993 CDCA5Q96FF9 252 aa16.02■□□□□ 0.15
TUBD1-202ENST00000340993 TMEM39BQ9GZU3 492 aa16.02■□□□□ 0.15
TUBD1-202ENST00000340993 ZNF532Q9HCE3 1301 aa16.02■□□□□ 0.15
TUBD1-202ENST00000340993 CDK5RAP2Q96SN8 1893 aa16.01■□□□□ 0.15
TUBD1-202ENST00000340993 RGS3P49796 1198 aa16.01■□□□□ 0.15
TUBD1-202ENST00000340993 CENPQQ7L2Z9 268 aaPredicted RBP16.01■□□□□ 0.15
TUBD1-202ENST00000340993 SH3RF3Q8TEJ3 882 aaPredicted RBP16.01■□□□□ 0.15
TUBD1-202ENST00000340993 NOL10Q9BSC4 688 aaKnown RBP16.01■□□□□ 0.15
TUBD1-202ENST00000340993 FSD1Q9BTV5 496 aa16.01■□□□□ 0.15
TUBD1-202ENST00000340993 DEFB129Q9H1M3 183 aa16.01■□□□□ 0.15
TUBD1-202ENST00000340993 TMOD2Q9NZR1 351 aa16.01■□□□□ 0.15
TUBD1-202ENST00000340993 HDLBPQ00341 1268 aaKnown RBP16■□□□□ 0.15
TUBD1-202ENST00000340993 RASA3Q14644 834 aa16■□□□□ 0.15
TUBD1-202ENST00000340993 MOB2Q70IA6 237 aa16■□□□□ 0.15
TUBD1-202ENST00000340993 APOBEC3FQ8IUX4 373 aaKnown RBP16■□□□□ 0.15
TUBD1-202ENST00000340993 SLF2Q8IX21 1173 aa16■□□□□ 0.15
TUBD1-202ENST00000340993 PGAP2Q9UHJ9 254 aa16■□□□□ 0.15
TUBD1-202ENST00000340993 GAKO14976 1311 aa16■□□□□ 0.15
TUBD1-202ENST00000340993 GRM1Q13255 1194 aa16■□□□□ 0.15
TUBD1-202ENST00000340993 TTLL12Q14166 644 aaPredicted RBP16■□□□□ 0.15
TUBD1-202ENST00000340993 ZFPM1Q8IX07 1006 aa16■□□□□ 0.15
TUBD1-202ENST00000340993 TEX11Q8IYF3 940 aa16■□□□□ 0.15
TUBD1-202ENST00000340993 LDHCP07864 332 aa15.99■□□□□ 0.15
TUBD1-202ENST00000340993 DDX4Q9NQI0 724 aaKnown RBP15.99■□□□□ 0.15
TUBD1-202ENST00000340993 PPP4R2Q9NY27 417 aa15.99■□□□□ 0.15
TUBD1-202ENST00000340993 ABT1Q9ULW3 272 aaKnown RBP15.99■□□□□ 0.15
TUBD1-202ENST00000340993 PASKQ96RG2 1323 aa15.99■□□□□ 0.15
TUBD1-202ENST00000340993 SLURP2P0DP57 97 aa15.98■□□□□ 0.15
TUBD1-202ENST00000340993 NBPF12Q5TAG4 269 aaPredicted RBP15.98■□□□□ 0.15
TUBD1-202ENST00000340993 PAXIP1Q6ZW49 1069 aaPredicted RBP15.98■□□□□ 0.15
TUBD1-202ENST00000340993 MAPKAPK5Q8IW41 473 aa15.98■□□□□ 0.15
TUBD1-202ENST00000340993 STAP2Q9UGK3 403 aa15.98■□□□□ 0.15
TUBD1-202ENST00000340993 GPR75-ASB3A0A0A6YYF3 556 aa15.98■□□□□ 0.15
TUBD1-202ENST00000340993 MMP14P50281 582 aa15.98■□□□□ 0.15
TUBD1-202ENST00000340993 CST9Q5W186 159 aa15.98■□□□□ 0.15
TUBD1-202ENST00000340993 ZSCAN29Q8IWY8 852 aaPredicted RBP15.98■□□□□ 0.15
TUBD1-202ENST00000340993 KBTBD3Q8NAB2 608 aa15.98■□□□□ 0.15
TUBD1-202ENST00000340993 TGFBRAP1Q8WUH2 860 aa15.98■□□□□ 0.15
TUBD1-202ENST00000340993 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.98■□□□□ 0.15
TUBD1-202ENST00000340993 SAP30BPQ9UHR5 308 aaKnown RBP15.98■□□□□ 0.15
TUBD1-202ENST00000340993 PITPNM2Q9BZ72 1349 aa15.97■□□□□ 0.15
TUBD1-202ENST00000340993 CNTNAP1P78357 1384 aa15.97■□□□□ 0.15
TUBD1-202ENST00000340993 ZBTB22O15209 634 aa15.97■□□□□ 0.15
TUBD1-202ENST00000340993 ADD2P35612 726 aa15.97■□□□□ 0.15
TUBD1-202ENST00000340993 RHBDL3P58872 404 aa15.97■□□□□ 0.15
TUBD1-202ENST00000340993 MRIQ9BWK5 157 aa15.97■□□□□ 0.15
TUBD1-202ENST00000340993 ARMT1Q9H993 441 aa15.97■□□□□ 0.15
TUBD1-202ENST00000340993 FAM198AQ9UFP1 575 aa15.97■□□□□ 0.15
TUBD1-202ENST00000340993 BAZ2AQ9UIF9 1905 aaKnown RBP15.97■□□□□ 0.15
TUBD1-202ENST00000340993 MAGEB6P1A0A0J9YX57 407 aa15.96■□□□□ 0.15
TUBD1-202ENST00000340993 TCRBV5S4A2TA0A5A2 114 aa15.96■□□□□ 0.15
TUBD1-202ENST00000340993 WDHD1O75717 1129 aaPredicted RBP15.96■□□□□ 0.15
TUBD1-202ENST00000340993 MBD4O95243 580 aa15.96■□□□□ 0.15
TUBD1-202ENST00000340993 BAG3O95817 575 aa15.96■□□□□ 0.15
TUBD1-202ENST00000340993 APLP1P51693 650 aa15.96■□□□□ 0.15
TUBD1-202ENST00000340993 LCORLQ8N3X6 602 aa15.96■□□□□ 0.15
TUBD1-202ENST00000340993 SEC62Q99442 399 aaKnown RBP15.96■□□□□ 0.15
TUBD1-202ENST00000340993 HSPA6P17066 643 aa15.95■□□□□ 0.14
TUBD1-202ENST00000340993 TNNI2P48788 182 aa15.95■□□□□ 0.14
TUBD1-202ENST00000340993 TNFAIP1Q13829 316 aa15.95■□□□□ 0.14
TUBD1-202ENST00000340993 MIGA2Q7L4E1 593 aa15.95■□□□□ 0.14
TUBD1-202ENST00000340993 FAM163AQ96GL9 167 aaPredicted RBP15.95■□□□□ 0.14
TUBD1-202ENST00000340993 PUS7LQ9H0K6 701 aaKnown RBP15.95■□□□□ 0.14
TUBD1-202ENST00000340993 MKRN1Q9UHC7 482 aaKnown RBP15.95■□□□□ 0.14
TUBD1-202ENST00000340993 MYH1P12882 1939 aa15.95■□□□□ 0.14
TUBD1-202ENST00000340993 TMEM88BA6NKF7 163 aa15.95■□□□□ 0.14
TUBD1-202ENST00000340993 GSPT1P15170 499 aaKnown RBP15.95■□□□□ 0.14
TUBD1-202ENST00000340993 USP5P45974 858 aa15.95■□□□□ 0.14
TUBD1-202ENST00000340993 CCDC129Q6ZRS4 1044 aa15.95■□□□□ 0.14
TUBD1-202ENST00000340993 SDR42E1Q8WUS8 393 aa15.95■□□□□ 0.14
TUBD1-202ENST00000340993 SSC5DA1L4H1 1573 aa15.94■□□□□ 0.14
TUBD1-202ENST00000340993 FOCADQ5VW36 1801 aa15.94■□□□□ 0.14
TUBD1-202ENST00000340993 FAM196BA6NMK8 535 aa15.94■□□□□ 0.14
TUBD1-202ENST00000340993 M0R2C6 588 aa15.94■□□□□ 0.14
TUBD1-202ENST00000340993 RNF113AO15541 343 aaKnown RBP15.94■□□□□ 0.14
TUBD1-202ENST00000340993 PRKAB2O43741 272 aa15.94■□□□□ 0.14
TUBD1-202ENST00000340993 NAV1Q8NEY1 1877 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms