RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 WTAPQ15007 396 aa13.75□□□□□ -0.21
C2orf88-201ENST00000340623 RASSF8Q8NHQ8 419 aa13.75□□□□□ -0.21
C2orf88-201ENST00000340623 CTCFLQ8NI51 663 aaPredicted RBP13.75□□□□□ -0.21
C2orf88-201ENST00000340623 TBC1D16Q8TBP0 767 aa13.75□□□□□ -0.21
C2orf88-201ENST00000340623 SH2B1Q9NRF2 756 aaPredicted RBP13.75□□□□□ -0.21
C2orf88-201ENST00000340623 ATP6V0A2Q9Y487 856 aa13.75□□□□□ -0.21
C2orf88-201ENST00000340623 KLRK1P26718 216 aa13.75□□□□□ -0.21
C2orf88-201ENST00000340623 CNNM2Q9H8M5 875 aa13.75□□□□□ -0.21
C2orf88-201ENST00000340623 USP40Q9NVE5 1235 aa13.75□□□□□ -0.21
C2orf88-201ENST00000340623 MARF1Q9Y4F3 1742 aaKnown RBP13.75□□□□□ -0.21
C2orf88-201ENST00000340623 TULP1O00294 542 aaPredicted RBP13.75□□□□□ -0.21
C2orf88-201ENST00000340623 FGAP02671 866 aa13.75□□□□□ -0.21
C2orf88-201ENST00000340623 HSPA4P34932 840 aa13.75□□□□□ -0.21
C2orf88-201ENST00000340623 BTDP43251 543 aa13.75□□□□□ -0.21
C2orf88-201ENST00000340623 RTKN2Q8IZC4 609 aa13.75□□□□□ -0.21
C2orf88-201ENST00000340623 COA1Q9GZY4 146 aa13.75□□□□□ -0.21
C2orf88-201ENST00000340623 GUCY1B3Q02153 619 aa13.74□□□□□ -0.21
C2orf88-201ENST00000340623 DLGAP5Q15398 846 aa13.74□□□□□ -0.21
C2orf88-201ENST00000340623 USP54Q70EL1 1684 aa13.74□□□□□ -0.21
C2orf88-201ENST00000340623 SCN11AQ9UI33 1791 aa13.74□□□□□ -0.21
C2orf88-201ENST00000340623 PRKAB2O43741 272 aa13.74□□□□□ -0.21
C2orf88-201ENST00000340623 MSNP26038 577 aaKnown RBP13.74□□□□□ -0.21
C2orf88-201ENST00000340623 CEBPZQ03701 1054 aaKnown RBP13.74□□□□□ -0.21
C2orf88-201ENST00000340623 CSPP1Q1MSJ5 1256 aa13.74□□□□□ -0.21
C2orf88-201ENST00000340623 DHX32Q7L7V1 743 aaKnown RBP13.74□□□□□ -0.21
C2orf88-201ENST00000340623 CATIPQ7Z7H3 387 aa13.74□□□□□ -0.21
C2orf88-201ENST00000340623 MTFR1LQ9H019 292 aa13.74□□□□□ -0.21
C2orf88-201ENST00000340623 TAOK3Q9H2K8 898 aa13.74□□□□□ -0.21
C2orf88-201ENST00000340623 CWC22Q9HCG8 908 aaKnown RBP13.74□□□□□ -0.21
C2orf88-201ENST00000340623 APOBRQ0VD83 1088 aa13.74□□□□□ -0.21
C2orf88-201ENST00000340623 CCDC96Q2M329 555 aa13.74□□□□□ -0.21
C2orf88-201ENST00000340623 IFNL3Q8IZI9 196 aa13.74□□□□□ -0.21
C2orf88-201ENST00000340623 DSCC1Q9BVC3 393 aa13.74□□□□□ -0.21
C2orf88-201ENST00000340623 LSG1Q9H089 658 aaKnown RBP13.74□□□□□ -0.21
C2orf88-201ENST00000340623 PATL2C9JE40 543 aaKnown RBP13.74□□□□□ -0.21
C2orf88-201ENST00000340623 CDKL5O76039 1030 aa13.74□□□□□ -0.21
C2orf88-201ENST00000340623 SRGNP10124 158 aa13.74□□□□□ -0.21
C2orf88-201ENST00000340623 RXRAP19793 462 aa13.74□□□□□ -0.21
C2orf88-201ENST00000340623 MECOMQ03112 1051 aa13.74□□□□□ -0.21
C2orf88-201ENST00000340623 RGS17Q9UGC6 210 aaPredicted RBP13.74□□□□□ -0.21
C2orf88-201ENST00000340623 CLEC11AQ9Y240 323 aa13.74□□□□□ -0.21
C2orf88-201ENST00000340623 RUFY3Q7L099 469 aa13.73□□□□□ -0.21
C2orf88-201ENST00000340623 RASEFQ8IZ41 740 aa13.73□□□□□ -0.21
C2orf88-201ENST00000340623 LCORLQ8N3X6 602 aa13.73□□□□□ -0.21
C2orf88-201ENST00000340623 CAMKK2Q96RR4 588 aa13.73□□□□□ -0.21
C2orf88-201ENST00000340623 TTC6Q86TZ1 520 aa13.73□□□□□ -0.21
C2orf88-201ENST00000340623 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.73□□□□□ -0.21
C2orf88-201ENST00000340623 KAT14Q9H8E8 782 aa13.73□□□□□ -0.21
C2orf88-201ENST00000340623 CABP5Q9NP86 173 aa13.73□□□□□ -0.21
C2orf88-201ENST00000340623 LMOD1P29536 600 aaPredicted RBP13.73□□□□□ -0.21
C2orf88-201ENST00000340623 METAP2P50579 478 aaKnown RBP eCLIP13.73□□□□□ -0.21
C2orf88-201ENST00000340623 IFIT1BQ5T764 474 aaKnown RBP13.73□□□□□ -0.21
C2orf88-201ENST00000340623 TNPO1Q92973 898 aaKnown RBP13.73□□□□□ -0.21
C2orf88-201ENST00000340623 FIBPO43427 364 aa13.72□□□□□ -0.21
C2orf88-201ENST00000340623 FEZ1Q99689 392 aa13.72□□□□□ -0.21
C2orf88-201ENST00000340623 BRMS1Q9HCU9 246 aa13.72□□□□□ -0.21
C2orf88-201ENST00000340623 WTIPA6NIX2 430 aaPredicted RBP13.72□□□□□ -0.21
C2orf88-201ENST00000340623 ZBTB43O43298 467 aa13.72□□□□□ -0.21
C2orf88-201ENST00000340623 TM4SF1P30408 202 aa13.72□□□□□ -0.21
C2orf88-201ENST00000340623 CCDC196A0A1B0GTZ2 297 aa13.71□□□□□ -0.21
C2orf88-201ENST00000340623 RGL2O15211 777 aa13.71□□□□□ -0.21
C2orf88-201ENST00000340623 TXNRD3Q86VQ6 643 aa13.71□□□□□ -0.21
C2orf88-201ENST00000340623 MAP4K1Q92918 833 aa13.71□□□□□ -0.21
C2orf88-201ENST00000340623 AKT1S1Q96B36 256 aa13.71□□□□□ -0.21
C2orf88-201ENST00000340623 PDGFDQ9GZP0 370 aaPredicted RBP13.71□□□□□ -0.21
C2orf88-201ENST00000340623 GDPD2Q9HCC8 539 aa13.71□□□□□ -0.21
C2orf88-201ENST00000340623 VAT1LQ9HCJ6 419 aa13.71□□□□□ -0.21
C2orf88-201ENST00000340623 DOT1LQ8TEK3 1739 aa13.71□□□□□ -0.21
C2orf88-201ENST00000340623 WDR33Q9C0J8 1336 aaKnown RBP13.71□□□□□ -0.21
C2orf88-201ENST00000340623 E7EWF7 191 aa13.71□□□□□ -0.21
C2orf88-201ENST00000340623 ECE2O60344 883 aa13.71□□□□□ -0.21
C2orf88-201ENST00000340623 COL22A1Q8NFW1 1626 aaPredicted RBP13.71□□□□□ -0.21
C2orf88-201ENST00000340623 CLRN2A0PK11 232 aa13.71□□□□□ -0.22
C2orf88-201ENST00000340623 USP17L3A6NCW0 530 aa13.71□□□□□ -0.22
C2orf88-201ENST00000340623 USP17L4A6NCW7 530 aa13.71□□□□□ -0.22
C2orf88-201ENST00000340623 USP17L1Q7RTZ2 530 aa13.71□□□□□ -0.22
C2orf88-201ENST00000340623 BICD2Q8TD16 824 aa13.71□□□□□ -0.22
C2orf88-201ENST00000340623 ZNF609O15014 1411 aa13.7□□□□□ -0.22
C2orf88-201ENST00000340623 RPS6KB1P23443 525 aa13.7□□□□□ -0.22
C2orf88-201ENST00000340623 ARID4AP29374 1257 aaPredicted RBP13.7□□□□□ -0.22
C2orf88-201ENST00000340623 RRP9O43818 475 aaKnown RBP13.7□□□□□ -0.22
C2orf88-201ENST00000340623 CYP21A2P08686 494 aa13.7□□□□□ -0.22
C2orf88-201ENST00000340623 GJB2P29033 226 aa13.7□□□□□ -0.22
C2orf88-201ENST00000340623 ADCK5Q3MIX3 580 aa13.7□□□□□ -0.22
C2orf88-201ENST00000340623 DRC7Q8IY82 874 aa13.7□□□□□ -0.22
C2orf88-201ENST00000340623 PPARAQ07869 468 aa13.7□□□□□ -0.22
C2orf88-201ENST00000340623 PODNQ7Z5L7 613 aa13.7□□□□□ -0.22
C2orf88-201ENST00000340623 ORC3Q9UBD5 711 aaPredicted RBP13.7□□□□□ -0.22
C2orf88-201ENST00000340623 PTMSP20962 102 aa13.69□□□□□ -0.22
C2orf88-201ENST00000340623 STYK1Q6J9G0 422 aa13.69□□□□□ -0.22
C2orf88-201ENST00000340623 TCP10L2B9ZVM9 353 aa13.69□□□□□ -0.22
C2orf88-201ENST00000340623 H7C1D1 291 aa13.69□□□□□ -0.22
C2orf88-201ENST00000340623 IARSP41252 1262 aaKnown RBP13.69□□□□□ -0.22
C2orf88-201ENST00000340623 CYP2D7A0A087X1C5 515 aa13.69□□□□□ -0.22
C2orf88-201ENST00000340623 FAM47AQ5JRC9 791 aa13.69□□□□□ -0.22
C2orf88-201ENST00000340623 AKNAD1Q5T1N1 836 aa13.69□□□□□ -0.22
C2orf88-201ENST00000340623 SLC26A6Q9BXS9 759 aa13.69□□□□□ -0.22
C2orf88-201ENST00000340623 POLLQ9UGP5 575 aa13.69□□□□□ -0.22
C2orf88-201ENST00000340623 PKD1L3Q7Z443 1732 aa13.69□□□□□ -0.22
C2orf88-201ENST00000340623 SNX21Q969T3 373 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms