RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 NSFL1CQ9UNZ2 370 aaKnown RBP8.51□□□□□ -1.05
NUP43-201ENST00000340413 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.51□□□□□ -1.05
NUP43-201ENST00000340413 ZNF213O14771 459 aa8.51□□□□□ -1.05
NUP43-201ENST00000340413 NUCB2P80303 420 aa8.51□□□□□ -1.05
NUP43-201ENST00000340413 MECOMQ03112 1051 aa8.51□□□□□ -1.05
NUP43-201ENST00000340413 IFNL3Q8IZI9 196 aa8.51□□□□□ -1.05
NUP43-201ENST00000340413 PDRG1Q9NUG6 133 aa8.51□□□□□ -1.05
NUP43-201ENST00000340413 TCP11L1Q9NUJ3 509 aa8.51□□□□□ -1.05
NUP43-201ENST00000340413 MYH1P12882 1939 aa8.51□□□□□ -1.05
NUP43-201ENST00000340413 ZC3H4Q9UPT8 1303 aaKnown RBP8.51□□□□□ -1.05
NUP43-201ENST00000340413 GSG1L2A8MUP6 293 aa8.51□□□□□ -1.05
NUP43-201ENST00000340413 CYP21A2P08686 494 aa8.51□□□□□ -1.05
NUP43-201ENST00000340413 DZIP1Q86YF9 867 aaKnown RBP8.51□□□□□ -1.05
NUP43-201ENST00000340413 AMOTL1Q8IY63 956 aa8.51□□□□□ -1.05
NUP43-201ENST00000340413 MB21D2Q8IYB1 491 aaPredicted RBP8.51□□□□□ -1.05
NUP43-201ENST00000340413 AGBL3Q8NEM8 1001 aa8.51□□□□□ -1.05
NUP43-201ENST00000340413 EDC3Q96F86 508 aaKnown RBP8.51□□□□□ -1.05
NUP43-201ENST00000340413 RAI14Q9P0K7 980 aa8.51□□□□□ -1.05
NUP43-201ENST00000340413 MKRN1Q9UHC7 482 aaKnown RBP8.51□□□□□ -1.05
NUP43-201ENST00000340413 LIFRP42702 1097 aa8.5□□□□□ -1.05
NUP43-201ENST00000340413 ANKS1AQ92625 1134 aa8.5□□□□□ -1.05
NUP43-201ENST00000340413 PALD1Q9ULE6 856 aa8.5□□□□□ -1.05
NUP43-201ENST00000340413 E7EWF7 191 aa8.5□□□□□ -1.05
NUP43-201ENST00000340413 MBD4O95243 580 aa8.5□□□□□ -1.05
NUP43-201ENST00000340413 MCM5P33992 734 aa8.5□□□□□ -1.05
NUP43-201ENST00000340413 PTGER2P43116 358 aa8.5□□□□□ -1.05
NUP43-201ENST00000340413 DALRD3Q5D0E6 543 aaKnown RBP8.5□□□□□ -1.05
NUP43-201ENST00000340413 ZDHHC15Q96MV8 337 aa8.5□□□□□ -1.05
NUP43-201ENST00000340413 EHD4Q9H223 541 aa8.5□□□□□ -1.05
NUP43-201ENST00000340413 USP17L3A6NCW0 530 aa8.5□□□□□ -1.05
NUP43-201ENST00000340413 USP17L4A6NCW7 530 aa8.5□□□□□ -1.05
NUP43-201ENST00000340413 FGAP02671 866 aa8.5□□□□□ -1.05
NUP43-201ENST00000340413 USP17L1Q7RTZ2 530 aa8.5□□□□□ -1.05
NUP43-201ENST00000340413 SGMS1Q86VZ5 419 aa8.5□□□□□ -1.05
NUP43-201ENST00000340413 ZNF622Q969S3 477 aaKnown RBP eCLIP8.5□□□□□ -1.05
NUP43-201ENST00000340413 KIF3AQ9Y496 699 aa8.5□□□□□ -1.05
NUP43-201ENST00000340413 C6orf229H3BNL8 230 aa8.49□□□□□ -1.05
NUP43-201ENST00000340413 NEK4P51957 841 aa8.49□□□□□ -1.05
NUP43-201ENST00000340413 TEX2Q8IWB9 1127 aa8.49□□□□□ -1.05
NUP43-201ENST00000340413 RASEFQ8IZ41 740 aa8.49□□□□□ -1.05
NUP43-201ENST00000340413 JAKMIP1Q96N16 626 aaKnown RBP8.49□□□□□ -1.05
NUP43-201ENST00000340413 NAPBQ9H115 298 aa8.49□□□□□ -1.05
NUP43-201ENST00000340413 GINM1Q9NU53 330 aa8.49□□□□□ -1.05
NUP43-201ENST00000340413 FRAT2O75474 233 aaPredicted RBP8.49□□□□□ -1.05
NUP43-201ENST00000340413 TRDNQ13061 729 aa8.49□□□□□ -1.05
NUP43-201ENST00000340413 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.49□□□□□ -1.05
NUP43-201ENST00000340413 ATRNL1Q5VV63 1379 aa8.49□□□□□ -1.05
NUP43-201ENST00000340413 VIL1P09327 827 aaKnown RBP8.49□□□□□ -1.05
NUP43-201ENST00000340413 DPEP1P16444 411 aa8.49□□□□□ -1.05
NUP43-201ENST00000340413 DACT2Q5SW24 774 aa8.49□□□□□ -1.05
NUP43-201ENST00000340413 AKNAD1Q5T1N1 836 aa8.49□□□□□ -1.05
NUP43-201ENST00000340413 IDI2Q9BXS1 227 aa8.49□□□□□ -1.05
NUP43-201ENST00000340413 SWAP70Q9UH65 585 aa8.49□□□□□ -1.05
NUP43-201ENST00000340413 PFKFB2O60825 505 aa8.48□□□□□ -1.05
NUP43-201ENST00000340413 CASTP20810 708 aaKnown RBP8.48□□□□□ -1.05
NUP43-201ENST00000340413 KLRK1P26718 216 aa8.48□□□□□ -1.05
NUP43-201ENST00000340413 NOVP48745 357 aa8.48□□□□□ -1.05
NUP43-201ENST00000340413 MSL1Q68DK7 614 aa8.48□□□□□ -1.05
NUP43-201ENST00000340413 PI16Q6UXB8 463 aa8.48□□□□□ -1.05
NUP43-201ENST00000340413 SPON1Q9HCB6 807 aa8.48□□□□□ -1.05
NUP43-201ENST00000340413 SLC4A4Q9Y6R1 1079 aa8.48□□□□□ -1.05
NUP43-201ENST00000340413 SCN9AQ15858 1988 aa8.48□□□□□ -1.05
NUP43-201ENST00000340413 MYH15Q9Y2K3 1946 aa8.48□□□□□ -1.05
NUP43-201ENST00000340413 DHX16O60231 1041 aaKnown RBP8.48□□□□□ -1.05
NUP43-201ENST00000340413 TXNRD3Q86VQ6 643 aa8.48□□□□□ -1.05
NUP43-201ENST00000340413 METTL16Q86W50 562 aaKnown RBP8.48□□□□□ -1.05
NUP43-201ENST00000340413 ZNF384Q8TF68 577 aa8.48□□□□□ -1.05
NUP43-201ENST00000340413 STK36Q9NRP7 1315 aa8.48□□□□□ -1.05
NUP43-201ENST00000340413 MYH8P13535 1937 aa8.48□□□□□ -1.05
NUP43-201ENST00000340413 ECE2O60344 883 aa8.48□□□□□ -1.05
NUP43-201ENST00000340413 ENTPD3O75355 529 aa8.48□□□□□ -1.05
NUP43-201ENST00000340413 PDCP20941 246 aa8.48□□□□□ -1.05
NUP43-201ENST00000340413 HMGN5P82970 282 aaKnown RBP8.48□□□□□ -1.05
NUP43-201ENST00000340413 LCORLQ8N3X6 602 aa8.48□□□□□ -1.05
NUP43-201ENST00000340413 SEC62Q99442 399 aaKnown RBP8.48□□□□□ -1.05
NUP43-201ENST00000340413 EPB41L4AQ9HCS5 686 aaPredicted RBP8.48□□□□□ -1.05
NUP43-201ENST00000340413 CALM1P0DP23 149 aa8.47□□□□□ -1.05
NUP43-201ENST00000340413 CALM2P0DP24 149 aa8.47□□□□□ -1.05
NUP43-201ENST00000340413 CALM3P0DP25 149 aa8.47□□□□□ -1.05
NUP43-201ENST00000340413 IARSP41252 1262 aaKnown RBP8.47□□□□□ -1.05
NUP43-201ENST00000340413 PPARAQ07869 468 aa8.47□□□□□ -1.05
NUP43-201ENST00000340413 SART3Q15020 963 aaKnown RBP8.47□□□□□ -1.05
NUP43-201ENST00000340413 TNIP1Q15025 636 aa8.47□□□□□ -1.05
NUP43-201ENST00000340413 RALYLQ86SE5 291 aaKnown RBP8.47□□□□□ -1.05
NUP43-201ENST00000340413 TMX3Q96JJ7 454 aa8.47□□□□□ -1.05
NUP43-201ENST00000340413 DHX36Q9H2U1 1008 aaKnown RBP8.47□□□□□ -1.05
NUP43-201ENST00000340413 SIPA1L1O43166 1804 aa8.47□□□□□ -1.05
NUP43-201ENST00000340413 AK2P54819 239 aa8.47□□□□□ -1.05
NUP43-201ENST00000340413 MFSD14BQ5SR56 506 aa8.47□□□□□ -1.05
NUP43-201ENST00000340413 TEKT1Q969V4 418 aa8.47□□□□□ -1.05
NUP43-201ENST00000340413 HDAC9Q9UKV0 1011 aa8.47□□□□□ -1.05
NUP43-201ENST00000340413 ZNRF3Q9ULT6 936 aa8.47□□□□□ -1.05
NUP43-201ENST00000340413 PDE4BQ07343 736 aa8.47□□□□□ -1.05
NUP43-201ENST00000340413 CCDC129Q6ZRS4 1044 aa8.47□□□□□ -1.05
NUP43-201ENST00000340413 ESR2Q92731 530 aa8.47□□□□□ -1.05
NUP43-201ENST00000340413 GMLQ99445 158 aa8.47□□□□□ -1.05
NUP43-201ENST00000340413 SBF1O95248 1867 aa8.46□□□□□ -1.05
NUP43-201ENST00000340413 TOB2Q14106 344 aaPredicted RBP8.46□□□□□ -1.05
NUP43-201ENST00000340413 RSBN1LQ6PCB5 846 aaPredicted RBP8.46□□□□□ -1.05
NUP43-201ENST00000340413 ARMT1Q9H993 441 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms