RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 LAMB1P07942 1786 aa25.1■■□□□ 1.61
VRK2-201ENST00000340157 NEDD4P46934 1319 aa25.1■■□□□ 1.61
VRK2-201ENST00000340157 DTNBO60941 627 aa25.1■■□□□ 1.61
VRK2-201ENST00000340157 CTDSPL2Q05D32 466 aa25.1■■□□□ 1.61
VRK2-201ENST00000340157 DIXDC1Q155Q3 683 aa25.1■■□□□ 1.61
VRK2-201ENST00000340157 ZNF219Q9P2Y4 722 aaPredicted RBP25.1■■□□□ 1.61
VRK2-201ENST00000340157 SCN9AQ15858 1988 aa25.09■■□□□ 1.61
VRK2-201ENST00000340157 ZBTB7AO95365 584 aa25.09■■□□□ 1.61
VRK2-201ENST00000340157 FBXL16Q8N461 479 aa25.09■■□□□ 1.61
VRK2-201ENST00000340157 TMX4Q9H1E5 349 aaPredicted RBP25.09■■□□□ 1.61
VRK2-201ENST00000340157 GPHNQ9NQX3 736 aaPredicted RBP25.09■■□□□ 1.61
VRK2-201ENST00000340157 SMIM22K7EJ46 135 aa25.09■■□□□ 1.61
VRK2-201ENST00000340157 DOK7Q18PE1 504 aa25.09■■□□□ 1.61
VRK2-201ENST00000340157 MFSD14BQ5SR56 506 aa25.09■■□□□ 1.61
VRK2-201ENST00000340157 KCNA3P22001 575 aa25.08■■□□□ 1.61
VRK2-201ENST00000340157 NUCB2P80303 420 aa25.08■■□□□ 1.61
VRK2-201ENST00000340157 RTFDC1Q9BY42 306 aaPredicted RBP25.08■■□□□ 1.61
VRK2-201ENST00000340157 PRC1O43663 620 aa25.07■■□□□ 1.6
VRK2-201ENST00000340157 MCM5P33992 734 aa25.07■■□□□ 1.6
VRK2-201ENST00000340157 GTF2IP78347 998 aa25.07■■□□□ 1.6
VRK2-201ENST00000340157 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.07■■□□□ 1.6
VRK2-201ENST00000340157 APOBRQ0VD83 1088 aa25.06■■□□□ 1.6
VRK2-201ENST00000340157 CYB5R4Q7L1T6 521 aa25.06■■□□□ 1.6
VRK2-201ENST00000340157 RALYLQ86SE5 291 aaKnown RBP25.06■■□□□ 1.6
VRK2-201ENST00000340157 WDR19Q8NEZ3 1342 aa25.06■■□□□ 1.6
VRK2-201ENST00000340157 B4E1Z4 1266 aa25.06■■□□□ 1.6
VRK2-201ENST00000340157 STK3Q13188 491 aa25.06■■□□□ 1.6
VRK2-201ENST00000340157 TBC1D22AQ8WUA7 517 aa25.06■■□□□ 1.6
VRK2-201ENST00000340157 EYA3Q99504 573 aa25.06■■□□□ 1.6
VRK2-201ENST00000340157 MROH7-TTC4A0A0A0MT08 1334 aa25.05■■□□□ 1.6
VRK2-201ENST00000340157 DPEP1P16444 411 aa25.05■■□□□ 1.6
VRK2-201ENST00000340157 GSTO1P78417 241 aa25.05■■□□□ 1.6
VRK2-201ENST00000340157 FGD1P98174 961 aa25.05■■□□□ 1.6
VRK2-201ENST00000340157 PPARAQ07869 468 aa25.05■■□□□ 1.6
VRK2-201ENST00000340157 AKNAD1Q5T1N1 836 aa25.05■■□□□ 1.6
VRK2-201ENST00000340157 GIMAP6Q6P9H5 292 aa25.05■■□□□ 1.6
VRK2-201ENST00000340157 STAG1Q8WVM7 1258 aa25.05■■□□□ 1.6
VRK2-201ENST00000340157 GTF3C6Q969F1 213 aa25.05■■□□□ 1.6
VRK2-201ENST00000340157 CERS5Q8N5B7 392 aa25.04■■□□□ 1.6
VRK2-201ENST00000340157 CRNKL1Q9BZJ0 848 aaKnown RBP25.04■■□□□ 1.6
VRK2-201ENST00000340157 DCP1AQ9NPI6 582 aaPredicted RBP25.04■■□□□ 1.6
VRK2-201ENST00000340157 ANAPC4Q9UJX5 808 aa25.04■■□□□ 1.6
VRK2-201ENST00000340157 NAV1Q8NEY1 1877 aa25.04■■□□□ 1.6
VRK2-201ENST00000340157 ADAMTSL1Q8N6G6 1762 aa25.04■■□□□ 1.6
VRK2-201ENST00000340157 CYP2D7A0A087X1C5 515 aa25.04■■□□□ 1.6
VRK2-201ENST00000340157 EVCP57679 992 aa25.04■■□□□ 1.6
VRK2-201ENST00000340157 TRDNQ13061 729 aa25.04■■□□□ 1.6
VRK2-201ENST00000340157 UPF1Q92900 1129 aaKnown RBP eCLIP25.04■■□□□ 1.6
VRK2-201ENST00000340157 SMC3Q9UQE7 1217 aa25.04■■□□□ 1.6
VRK2-201ENST00000340157 ATF5Q9Y2D1 282 aaPredicted RBP25.04■■□□□ 1.6
VRK2-201ENST00000340157 PPP4CP60510 307 aa25.03■■□□□ 1.6
VRK2-201ENST00000340157 EVX2Q03828 476 aa25.03■■□□□ 1.6
VRK2-201ENST00000340157 DBNDD1Q9H9R9 158 aa25.03■■□□□ 1.6
VRK2-201ENST00000340157 BRCA1P38398 1863 aaKnown RBP25.03■■□□□ 1.6
VRK2-201ENST00000340157 C21orf2O43822 256 aa25.02■■□□□ 1.6
VRK2-201ENST00000340157 PFKFB2O60825 505 aa25.02■■□□□ 1.6
VRK2-201ENST00000340157 BRD1O95696 1058 aa25.02■■□□□ 1.6
VRK2-201ENST00000340157 GJB2P29033 226 aa25.02■■□□□ 1.6
VRK2-201ENST00000340157 MCM4P33991 863 aa25.02■■□□□ 1.6
VRK2-201ENST00000340157 SCRN1Q12765 414 aa25.02■■□□□ 1.6
VRK2-201ENST00000340157 CTR9Q6PD62 1173 aa25.02■■□□□ 1.6
VRK2-201ENST00000340157 TTLL6Q8N841 843 aa25.02■■□□□ 1.6
VRK2-201ENST00000340157 SH3RF3Q8TEJ3 882 aaPredicted RBP25.02■■□□□ 1.6
VRK2-201ENST00000340157 MXD3Q9BW11 206 aa25.02■■□□□ 1.6
VRK2-201ENST00000340157 MTFR1LQ9H019 292 aa25.02■■□□□ 1.6
VRK2-201ENST00000340157 MKRN1Q9UHC7 482 aaKnown RBP25.02■■□□□ 1.6
VRK2-201ENST00000340157 MINDY4BA8MYZ0 360 aa25.02■■□□□ 1.6
VRK2-201ENST00000340157 R3HDM1Q15032 1099 aaKnown RBP25.02■■□□□ 1.6
VRK2-201ENST00000340157 KCNQ5Q9NR82 932 aa25.02■■□□□ 1.6
VRK2-201ENST00000340157 ATP8A2Q9NTI2 1148 aa25.02■■□□□ 1.6
VRK2-201ENST00000340157 FOCADQ5VW36 1801 aa25.02■■□□□ 1.6
VRK2-201ENST00000340157 DDX60LQ5H9U9 1706 aaKnown RBP25.01■■□□□ 1.6
VRK2-201ENST00000340157 CC2D2BQ6DHV5 1058 aa25.01■■□□□ 1.59
VRK2-201ENST00000340157 CLEC17AQ6ZS10 378 aa25.01■■□□□ 1.59
VRK2-201ENST00000340157 MFSD6Q6ZSS7 791 aa25.01■■□□□ 1.59
VRK2-201ENST00000340157 BRPF3Q9ULD4 1205 aa25.01■■□□□ 1.59
VRK2-201ENST00000340157 GAKO14976 1311 aa25.01■■□□□ 1.59
VRK2-201ENST00000340157 GPR75-ASB3A0A0A6YYF3 556 aa25■■□□□ 1.59
VRK2-201ENST00000340157 LDHCP07864 332 aa25■■□□□ 1.59
VRK2-201ENST00000340157 PDIA3P30101 505 aaKnown RBP25■■□□□ 1.59
VRK2-201ENST00000340157 STK11IPQ8N1F8 1099 aa25■■□□□ 1.59
VRK2-201ENST00000340157 FAM163AQ96GL9 167 aaPredicted RBP25■■□□□ 1.59
VRK2-201ENST00000340157 ZSWIM5Q9P217 1185 aa25■■□□□ 1.59
VRK2-201ENST00000340157 USP17L12C9JPN9 530 aa25■■□□□ 1.59
VRK2-201ENST00000340157 USP17L21D6R901 530 aa25■■□□□ 1.59
VRK2-201ENST00000340157 KDM4AO75164 1064 aa25■■□□□ 1.59
VRK2-201ENST00000340157 PODNQ7Z5L7 613 aa25■■□□□ 1.59
VRK2-201ENST00000340157 FBXW7Q969H0 707 aa25■■□□□ 1.59
VRK2-201ENST00000340157 ZNF274Q96GC6 653 aaPredicted RBP25■■□□□ 1.59
VRK2-201ENST00000340157 CNNM2Q9H8M5 875 aa25■■□□□ 1.59
VRK2-201ENST00000340157 SH2B2O14492 632 aaPredicted RBP24.99■■□□□ 1.59
VRK2-201ENST00000340157 SENP2Q9HC62 589 aa24.99■■□□□ 1.59
VRK2-201ENST00000340157 BAG3O95817 575 aa24.98■■□□□ 1.59
VRK2-201ENST00000340157 SYT1P21579 422 aa24.98■■□□□ 1.59
VRK2-201ENST00000340157 BTDP43251 543 aa24.98■■□□□ 1.59
VRK2-201ENST00000340157 AOC3Q16853 763 aa24.98■■□□□ 1.59
VRK2-201ENST00000340157 IGDCC4Q8TDY8 1250 aa24.98■■□□□ 1.59
VRK2-201ENST00000340157 KRT23Q9C075 422 aa24.98■■□□□ 1.59
VRK2-201ENST00000340157 SUGT1Q9Y2Z0 365 aa24.98■■□□□ 1.59
VRK2-201ENST00000340157 PSME4Q14997 1843 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms