RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 RNF41Q9H4P4 317 aaPredicted RBP12.5□□□□□ -0.41
TRAF3IP2-201ENST00000340026 SEC31BQ9NQW1 1179 aa12.5□□□□□ -0.41
TRAF3IP2-201ENST00000340026 SPTLC3Q9NUV7 552 aa12.5□□□□□ -0.41
TRAF3IP2-201ENST00000340026 COL4A1P02462 1669 aa12.5□□□□□ -0.41
TRAF3IP2-201ENST00000340026 TOM1O60784 492 aa12.49□□□□□ -0.41
TRAF3IP2-201ENST00000340026 CCAR1Q8IX12 1150 aaKnown RBP12.49□□□□□ -0.41
TRAF3IP2-201ENST00000340026 ELOA2Q8IYF1 753 aaPredicted RBP12.49□□□□□ -0.41
TRAF3IP2-201ENST00000340026 FMR1NBQ8N0W7 255 aaPredicted RBP12.49□□□□□ -0.41
TRAF3IP2-201ENST00000340026 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.49□□□□□ -0.418e-7■■■■□ 23.3
TRAF3IP2-201ENST00000340026 DTNBO60941 627 aa12.49□□□□□ -0.41
TRAF3IP2-201ENST00000340026 PPP6R2O75170 966 aa12.49□□□□□ -0.41
TRAF3IP2-201ENST00000340026 FGRP09769 529 aa12.49□□□□□ -0.41
TRAF3IP2-201ENST00000340026 U2AF2P26368 475 aaKnown RBP eCLIP12.49□□□□□ -0.41
TRAF3IP2-201ENST00000340026 METAP2P50579 478 aaKnown RBP eCLIP12.49□□□□□ -0.41
TRAF3IP2-201ENST00000340026 PLA2G4DQ86XP0 818 aa12.49□□□□□ -0.41
TRAF3IP2-201ENST00000340026 FNBP4Q8N3X1 1017 aaPredicted RBP12.49□□□□□ -0.41
TRAF3IP2-201ENST00000340026 MAGEB6Q8N7X4 407 aa12.49□□□□□ -0.41
TRAF3IP2-201ENST00000340026 MRPS27Q92552 414 aaKnown RBP12.49□□□□□ -0.41
TRAF3IP2-201ENST00000340026 BPIFA3Q9BQP9 254 aa12.49□□□□□ -0.41
TRAF3IP2-201ENST00000340026 NYXQ9GZU5 481 aa12.49□□□□□ -0.41
TRAF3IP2-201ENST00000340026 NAPBQ9H115 298 aa12.49□□□□□ -0.41
TRAF3IP2-201ENST00000340026 CBX8Q9HC52 389 aa12.49□□□□□ -0.41
TRAF3IP2-201ENST00000340026 GPHNQ9NQX3 736 aaPredicted RBP12.49□□□□□ -0.41
TRAF3IP2-201ENST00000340026 GNL3LQ9NVN8 582 aaKnown RBP12.49□□□□□ -0.41
TRAF3IP2-201ENST00000340026 ADAMTS2O95450 1211 aa12.48□□□□□ -0.41
TRAF3IP2-201ENST00000340026 IFNAR1P17181 557 aa12.48□□□□□ -0.41
TRAF3IP2-201ENST00000340026 STX1AQ16623 288 aa12.48□□□□□ -0.41
TRAF3IP2-201ENST00000340026 WASF1Q92558 559 aa12.48□□□□□ -0.41
TRAF3IP2-201ENST00000340026 TIGD1Q96MW7 591 aa12.48□□□□□ -0.41
TRAF3IP2-201ENST00000340026 DUOX1Q9NRD9 1551 aa12.48□□□□□ -0.41
TRAF3IP2-201ENST00000340026 LAMB1P07942 1786 aa12.48□□□□□ -0.41
TRAF3IP2-201ENST00000340026 NEDD4P46934 1319 aa12.48□□□□□ -0.41
TRAF3IP2-201ENST00000340026 MYH13Q9UKX3 1938 aa12.48□□□□□ -0.41
TRAF3IP2-201ENST00000340026 ZBTB43O43298 467 aa12.48□□□□□ -0.41
TRAF3IP2-201ENST00000340026 AP5Z1O43299 807 aa12.48□□□□□ -0.41
TRAF3IP2-201ENST00000340026 MBD4O95243 580 aa12.48□□□□□ -0.41
TRAF3IP2-201ENST00000340026 ANO6Q4KMQ2 910 aa12.48□□□□□ -0.41
TRAF3IP2-201ENST00000340026 ANKRD18AQ8IVF6 992 aa12.48□□□□□ -0.41
TRAF3IP2-201ENST00000340026 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.48□□□□□ -0.41
TRAF3IP2-201ENST00000340026 NARFQ9UHQ1 456 aa12.48□□□□□ -0.41
TRAF3IP2-201ENST00000340026 PTMAP06454 111 aaKnown RBP12.47□□□□□ -0.41
TRAF3IP2-201ENST00000340026 IQCB1Q15051 598 aa12.47□□□□□ -0.41
TRAF3IP2-201ENST00000340026 LINC00116Q8NCU8 138 aa12.47□□□□□ -0.41
TRAF3IP2-201ENST00000340026 GOLPH3LQ9H4A5 285 aa12.47□□□□□ -0.41
TRAF3IP2-201ENST00000340026 FAM217BQ9NTX9 383 aaPredicted RBP12.47□□□□□ -0.41
TRAF3IP2-201ENST00000340026 PCDHA7Q9UN72 937 aa12.47□□□□□ -0.41
TRAF3IP2-201ENST00000340026 KINO60870 393 aaKnown RBP12.47□□□□□ -0.41
TRAF3IP2-201ENST00000340026 RPS6KA4O75676 772 aa12.47□□□□□ -0.41
TRAF3IP2-201ENST00000340026 ACSBG1Q96GR2 724 aa12.47□□□□□ -0.41
TRAF3IP2-201ENST00000340026 BRIP1Q9BX63 1249 aa12.47□□□□□ -0.41
TRAF3IP2-201ENST00000340026 DENND2AQ9ULE3 1009 aa12.47□□□□□ -0.41
TRAF3IP2-201ENST00000340026 COL1A1P02452 1464 aaPredicted RBP12.47□□□□□ -0.41
TRAF3IP2-201ENST00000340026 FMNL1O95466 1100 aaPredicted RBP12.47□□□□□ -0.41
TRAF3IP2-201ENST00000340026 CMA1P23946 247 aa12.47□□□□□ -0.41
TRAF3IP2-201ENST00000340026 ZNF165P49910 485 aa12.47□□□□□ -0.41
TRAF3IP2-201ENST00000340026 SLC39A14Q15043 492 aa12.47□□□□□ -0.41
TRAF3IP2-201ENST00000340026 ANO10Q9NW15 660 aa12.47□□□□□ -0.41
TRAF3IP2-201ENST00000340026 B4E1Z4 1266 aa12.46□□□□□ -0.41
TRAF3IP2-201ENST00000340026 SPTLC2O15270 562 aa12.46□□□□□ -0.41
TRAF3IP2-201ENST00000340026 BCAMP50895 628 aa12.46□□□□□ -0.41
TRAF3IP2-201ENST00000340026 SART3Q15020 963 aaKnown RBP12.46□□□□□ -0.41
TRAF3IP2-201ENST00000340026 CAMK4Q16566 473 aa12.46□□□□□ -0.41
TRAF3IP2-201ENST00000340026 ANO1Q5XXA6 986 aa12.46□□□□□ -0.41
TRAF3IP2-201ENST00000340026 MFSD6Q6ZSS7 791 aa12.46□□□□□ -0.41
TRAF3IP2-201ENST00000340026 FBXO33Q7Z6M2 555 aa12.46□□□□□ -0.41
TRAF3IP2-201ENST00000340026 HELBQ8NG08 1087 aaPredicted RBP12.46□□□□□ -0.41
TRAF3IP2-201ENST00000340026 ZSWIM5Q9P217 1185 aa12.46□□□□□ -0.41
TRAF3IP2-201ENST00000340026 CCDC196A0A1B0GTZ2 297 aa12.46□□□□□ -0.42
TRAF3IP2-201ENST00000340026 APPP05067 770 aa12.46□□□□□ -0.42
TRAF3IP2-201ENST00000340026 AXDND1Q5T1B0 1012 aaPredicted RBP12.46□□□□□ -0.42
TRAF3IP2-201ENST00000340026 RIOK1Q9BRS2 568 aaKnown RBP12.46□□□□□ -0.42
TRAF3IP2-201ENST00000340026 BCL2L12Q9HB09 334 aa12.46□□□□□ -0.42
TRAF3IP2-201ENST00000340026 SBF2Q86WG5 1849 aa12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 CDC27P30260 824 aa12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 ME1P48163 572 aa12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 RBM6P78332 1123 aaKnown RBP12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 TMEM67Q5HYA8 995 aa12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 CKAP2LQ8IYA6 745 aa12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 LCORLQ8N3X6 602 aa12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 JMYQ8N9B5 988 aa12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 FSIP1Q8NA03 581 aa12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 MRFAP1L1Q96HT8 127 aa12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 NOL10Q9BSC4 688 aaKnown RBP12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 ALG1Q9BT22 464 aa12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 ANKRD2Q9GZV1 360 aa12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 MINPP1Q9UNW1 487 aa12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 CCDC88AQ3V6T2 1871 aa12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 IARSP41252 1262 aaKnown RBP12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 ERFEQ4G0M1 354 aa12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 SYNE3Q6ZMZ3 975 aa12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 NAP1L5Q96NT1 182 aaPredicted RBP12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 ARMT1Q9H993 441 aa12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 HPSEQ9Y251 543 aa12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 SLC12A7Q9Y666 1083 aa12.45□□□□□ -0.42
TRAF3IP2-201ENST00000340026 ZNF75DP51815 510 aa12.44□□□□□ -0.42
TRAF3IP2-201ENST00000340026 STK38Q15208 465 aa12.44□□□□□ -0.42
TRAF3IP2-201ENST00000340026 CAVIN4Q5BKX8 364 aa12.44□□□□□ -0.42
TRAF3IP2-201ENST00000340026 KRT40Q6A162 431 aa12.44□□□□□ -0.42
TRAF3IP2-201ENST00000340026 NKX2-3Q8TAU0 364 aa12.44□□□□□ -0.42
TRAF3IP2-201ENST00000340026 KIAA1524Q8TCG1 905 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms