RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 S100A1P23297 94 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 TUBA1BP68363 451 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 SEPT6Q14141 434 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 CASP8Q14790 479 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 MAP7D1Q3KQU3 841 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 DPY19L2Q6NUT2 758 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 TUBA1AQ71U36 451 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 MAIP1Q8WWC4 291 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 IQCDQ96DY2 449 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 DNAAF2Q9NVR5 837 aaKnown RBP4.67□□□□□ -1.66
NEDD4-201ENST00000338963 SCHIP1Q9P0W5 487 aaPredicted RBP4.67□□□□□ -1.66
NEDD4-201ENST00000338963 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.67□□□□□ -1.66
NEDD4-201ENST00000338963 ALDH1B1P30837 517 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 SERPINB8P50452 374 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 LACTBP83111 547 aaPredicted RBP4.67□□□□□ -1.66
NEDD4-201ENST00000338963 SPECC1LQ69YQ0 1117 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 OLFML1Q6UWY5 402 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 KIAA0825Q8IV33 1275 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 CCAR1Q8IX12 1150 aaKnown RBP4.67□□□□□ -1.66
NEDD4-201ENST00000338963 PDCD7Q8N8D1 485 aaKnown RBP4.67□□□□□ -1.66
NEDD4-201ENST00000338963 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.67□□□□□ -1.66
NEDD4-201ENST00000338963 OPTNQ96CV9 577 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 NAA15Q9BXJ9 866 aaKnown RBP4.67□□□□□ -1.66
NEDD4-201ENST00000338963 C15orf41Q9Y2V0 281 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 H3BQF6 201 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 WDHD1O75717 1129 aaPredicted RBP4.67□□□□□ -1.66
NEDD4-201ENST00000338963 TOP1P11387 765 aaKnown RBP4.67□□□□□ -1.66
NEDD4-201ENST00000338963 GNAT1P11488 350 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 XBP1P17861 261 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 PSMC4P43686 418 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 NEK4P51957 841 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 GNG11P61952 73 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 CLPPQ16740 277 aaPredicted RBP4.67□□□□□ -1.66
NEDD4-201ENST00000338963 KCNV2Q8TDN2 545 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 UPF3BQ9BZI7 483 aaKnown RBP4.67□□□□□ -1.66
NEDD4-201ENST00000338963 PARVBQ9HBI1 364 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 PDP2Q9P2J9 529 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 ARHGEF12Q9NZN5 1544 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 ATP10AO60312 1499 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 ZBED4O75132 1171 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 GSTA1P08263 222 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 GBP1P32455 592 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 SKOR1P84550 965 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 CCZ1BP86790 482 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 CCZ1P86791 482 aaPredicted RBP4.67□□□□□ -1.66
NEDD4-201ENST00000338963 ANO6Q4KMQ2 910 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 PEX5LQ8IYB4 626 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 LRRC43Q8N309 656 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 ATL2Q8NHH9 583 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 PCDH18Q9HCL0 1135 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 PRDM2Q13029 1718 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 RGS12O14924 1447 aa4.67□□□□□ -1.66
NEDD4-201ENST00000338963 RASSF9O75901 435 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 NAT1P18440 290 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 BEND6Q5SZJ8 279 aaPredicted RBP4.66□□□□□ -1.66
NEDD4-201ENST00000338963 ALS2CLQ60I27 953 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 CYB5D1Q6P9G0 228 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 CNKSR1Q969H4 720 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 EPAS1Q99814 870 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 TAOK3Q9H2K8 898 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 ZCCHC17Q9NP64 241 aaKnown RBP4.66□□□□□ -1.66
NEDD4-201ENST00000338963 TRMT1Q9NXH9 659 aaKnown RBP4.66□□□□□ -1.66
NEDD4-201ENST00000338963 CDC23Q9UJX2 597 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 ZDHHC9Q9Y397 364 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 SPDYE3A6NKU9 549 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 STX6O43752 255 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 RNF8O76064 485 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 FCHSD2O94868 740 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 ATP4AP20648 1035 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 GNAI1P63096 354 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 LBRQ14739 615 aaKnown RBP4.66□□□□□ -1.66
NEDD4-201ENST00000338963 CFAP100Q494V2 611 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 WDR93Q6P2C0 686 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 SMYD1Q8NB12 490 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 CCDC110Q8TBZ0 833 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 L1RE1Q9UN81 338 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 TMEM98Q9Y2Y6 226 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 MGRN1O60291 552 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 ZNF24P17028 368 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 ZNF394Q53GI3 561 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 NBPF14Q5TI25 921 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 ATL3Q6DD88 541 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 PRPF40BQ6NWY9 871 aaKnown RBP4.66□□□□□ -1.66
NEDD4-201ENST00000338963 RBM43Q6ZSC3 357 aaKnown RBP4.66□□□□□ -1.66
NEDD4-201ENST00000338963 CADPS2Q86UW7 1296 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 NME8Q8N427 588 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 SMC1BQ8NDV3 1235 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 OLFM3Q96PB7 478 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 NACA2Q9H009 215 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 SIL1Q9H173 461 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.66□□□□□ -1.66
NEDD4-201ENST00000338963 QPCTLQ9NXS2 382 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 SEPT10Q9P0V9 454 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 PDS5BQ9NTI5 1447 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 ANKRD50Q9ULJ7 1429 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 PLXNC1O60486 1568 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 B4DLN1 442 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 LRMPQ12912 555 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 TTLL7Q6ZT98 887 aa4.66□□□□□ -1.66
NEDD4-201ENST00000338963 ANKS4BQ8N8V4 417 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms