RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 FAM47CQ5HY64 1035 aa13.19□□□□□ -0.3
SHANK2-201ENST00000338508 TTC22Q5TAA0 569 aa13.19□□□□□ -0.3
SHANK2-201ENST00000338508 MBIPQ9NS73 344 aa13.19□□□□□ -0.3
SHANK2-201ENST00000338508 NKIRAS1Q9NYS0 192 aa13.19□□□□□ -0.3
SHANK2-201ENST00000338508 LRPPRCP42704 1394 aaKnown RBP13.19□□□□□ -0.3
SHANK2-201ENST00000338508 WDR46O15213 610 aaKnown RBP13.19□□□□□ -0.3
SHANK2-201ENST00000338508 TCP10Q12799 353 aa13.19□□□□□ -0.3
SHANK2-201ENST00000338508 UTP14CQ5TAP6 766 aaKnown RBP13.19□□□□□ -0.3
SHANK2-201ENST00000338508 NBPF14Q5TI25 921 aa13.19□□□□□ -0.3
SHANK2-201ENST00000338508 NYXQ9GZU5 481 aa13.19□□□□□ -0.3
SHANK2-201ENST00000338508 IFNKQ9P0W0 207 aa13.19□□□□□ -0.3
SHANK2-201ENST00000338508 NEDD9Q14511 834 aa13.19□□□□□ -0.3
SHANK2-201ENST00000338508 RHPN1Q8TCX5 695 aa13.19□□□□□ -0.3
SHANK2-201ENST00000338508 PIK3R4Q99570 1358 aa13.19□□□□□ -0.3
SHANK2-201ENST00000338508 CAMSAP2Q08AD1 1489 aa13.18□□□□□ -0.3
SHANK2-201ENST00000338508 DDB1Q16531 1140 aa13.18□□□□□ -0.3
SHANK2-201ENST00000338508 NMIQ13287 307 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-201ENST00000338508 CCDC24Q8N4L8 307 aa13.18□□□□□ -0.3
SHANK2-201ENST00000338508 KIAA1107Q9UPP5 1409 aa13.18□□□□□ -0.3
SHANK2-201ENST00000338508 SPTLC2O15270 562 aa13.18□□□□□ -0.3
SHANK2-201ENST00000338508 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.18□□□□□ -0.3
SHANK2-201ENST00000338508 STK10O94804 968 aaKnown RBP13.18□□□□□ -0.3
SHANK2-201ENST00000338508 IFT74Q96LB3 600 aa13.18□□□□□ -0.3
SHANK2-201ENST00000338508 VPS16Q9H269 839 aa13.18□□□□□ -0.3
SHANK2-201ENST00000338508 BMP15O95972 392 aa13.18□□□□□ -0.3
SHANK2-201ENST00000338508 SYT10Q6XYQ8 523 aa13.18□□□□□ -0.3
SHANK2-201ENST00000338508 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.18□□□□□ -0.3
SHANK2-201ENST00000338508 NSMCE1Q8WV22 266 aa13.18□□□□□ -0.3
SHANK2-201ENST00000338508 RIOK1Q9BRS2 568 aaKnown RBP13.18□□□□□ -0.3
SHANK2-201ENST00000338508 SDSP20132 328 aa13.17□□□□□ -0.3
SHANK2-201ENST00000338508 SMTNP53814 917 aa13.17□□□□□ -0.3
SHANK2-201ENST00000338508 PLEKHH2Q8IVE3 1493 aa13.17□□□□□ -0.3
SHANK2-201ENST00000338508 BANK1Q8NDB2 785 aa13.17□□□□□ -0.3
SHANK2-201ENST00000338508 SKA2Q8WVK7 121 aaPredicted RBP13.17□□□□□ -0.3
SHANK2-201ENST00000338508 PSMB7Q99436 277 aa13.17□□□□□ -0.3
SHANK2-201ENST00000338508 ZFYP08048 801 aaPredicted RBP13.17□□□□□ -0.3
SHANK2-201ENST00000338508 CALML3P27482 149 aa13.17□□□□□ -0.3
SHANK2-201ENST00000338508 LONRF3Q496Y0 759 aa13.17□□□□□ -0.3
SHANK2-201ENST00000338508 NCAPH2Q6IBW4 605 aa13.17□□□□□ -0.3
SHANK2-201ENST00000338508 CCDC125Q86Z20 511 aa13.17□□□□□ -0.3
SHANK2-201ENST00000338508 GPR161Q8N6U8 529 aaKnown RBP13.17□□□□□ -0.3
SHANK2-201ENST00000338508 WHAMMQ8TF30 809 aa13.17□□□□□ -0.3
SHANK2-201ENST00000338508 MEIS3Q99687 375 aa13.17□□□□□ -0.3
SHANK2-201ENST00000338508 CDK13Q14004 1512 aaKnown RBP13.17□□□□□ -0.3
SHANK2-201ENST00000338508 CNGA1P29973 690 aa13.17□□□□□ -0.3
SHANK2-201ENST00000338508 TPTE2Q6XPS3 522 aa13.17□□□□□ -0.3
SHANK2-201ENST00000338508 CHMP6Q96FZ7 201 aa13.17□□□□□ -0.3
SHANK2-201ENST00000338508 EPRSP07814 1512 aaKnown RBP13.17□□□□□ -0.3
SHANK2-201ENST00000338508 VAV2P52735 878 aa13.17□□□□□ -0.3
SHANK2-201ENST00000338508 ATP11AP98196 1134 aa13.17□□□□□ -0.3
SHANK2-201ENST00000338508 ITKQ08881 620 aa13.17□□□□□ -0.3
SHANK2-201ENST00000338508 SV2BQ7L1I2 683 aa13.17□□□□□ -0.3
SHANK2-201ENST00000338508 MED10Q9BTT4 135 aa13.17□□□□□ -0.3
SHANK2-201ENST00000338508 NOC4LQ9BVI4 516 aaKnown RBP13.17□□□□□ -0.3
SHANK2-201ENST00000338508 BZW2Q9Y6E2 419 aaKnown RBP13.17□□□□□ -0.3
SHANK2-201ENST00000338508 WASLO00401 505 aaPredicted RBP13.17□□□□□ -0.3
SHANK2-201ENST00000338508 EBAG9O00559 213 aa13.17□□□□□ -0.3
SHANK2-201ENST00000338508 LACTBP83111 547 aaPredicted RBP13.17□□□□□ -0.3
SHANK2-201ENST00000338508 IVLP07476 585 aa13.16□□□□□ -0.3
SHANK2-201ENST00000338508 BRDTQ58F21 947 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-201ENST00000338508 BEND3Q5T5X7 828 aa13.16□□□□□ -0.3
SHANK2-201ENST00000338508 C10orf67Q8IYJ2 551 aa13.16□□□□□ -0.3
SHANK2-201ENST00000338508 METTL13Q8N6R0 699 aa13.16□□□□□ -0.3
SHANK2-201ENST00000338508 RTL9Q8NET4 1388 aa13.16□□□□□ -0.3
SHANK2-201ENST00000338508 GNA11P29992 359 aa13.16□□□□□ -0.3
SHANK2-201ENST00000338508 PCK1P35558 622 aa13.16□□□□□ -0.3
SHANK2-201ENST00000338508 TMTC4Q5T4D3 741 aa13.16□□□□□ -0.3
SHANK2-201ENST00000338508 MYO1AQ9UBC5 1043 aa13.16□□□□□ -0.3
SHANK2-201ENST00000338508 GRM8O00222 908 aa13.16□□□□□ -0.3
SHANK2-201ENST00000338508 CASQ2O14958 399 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-201ENST00000338508 ERCC6LQ2NKX8 1250 aa13.16□□□□□ -0.3
SHANK2-201ENST00000338508 DCLK2Q8N568 766 aa13.16□□□□□ -0.3
SHANK2-201ENST00000338508 IRS4O14654 1257 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-201ENST00000338508 FYB2Q5VWT5 728 aa13.16□□□□□ -0.3
SHANK2-201ENST00000338508 MGARPQ8TDB4 240 aa13.16□□□□□ -0.3
SHANK2-201ENST00000338508 HFM1A2PYH4 1435 aa13.16□□□□□ -0.3
SHANK2-201ENST00000338508 CC2D2AQ9P2K1 1620 aa13.16□□□□□ -0.3
SHANK2-201ENST00000338508 GNPATO15228 680 aa13.15□□□□□ -0.3
SHANK2-201ENST00000338508 SPAG1Q07617 926 aa13.15□□□□□ -0.3
SHANK2-201ENST00000338508 NOLC1Q14978 699 aaKnown RBP eCLIP13.15□□□□□ -0.3
SHANK2-201ENST00000338508 M0QZ92 97 aa13.15□□□□□ -0.3
SHANK2-201ENST00000338508 TTC31Q49AM3 519 aaPredicted RBP13.15□□□□□ -0.3
SHANK2-201ENST00000338508 TEX11Q8IYF3 940 aa13.15□□□□□ -0.3
SHANK2-201ENST00000338508 PPFIBP2Q8ND30 876 aa13.15□□□□□ -0.3
SHANK2-201ENST00000338508 DDX27Q96GQ7 796 aaKnown RBP13.15□□□□□ -0.3
SHANK2-201ENST00000338508 UTP11Q9Y3A2 253 aaKnown RBP13.15□□□□□ -0.3
SHANK2-201ENST00000338508 POLA1P09884 1462 aaPredicted RBP13.15□□□□□ -0.3
SHANK2-201ENST00000338508 ARID4AP29374 1257 aaPredicted RBP13.15□□□□□ -0.3
SHANK2-201ENST00000338508 LUC7L2Q9Y383 392 aaKnown RBP13.15□□□□□ -0.3
SHANK2-201ENST00000338508 PRPF6O94906 941 aaKnown RBP13.15□□□□□ -0.3
SHANK2-201ENST00000338508 TNNC1P63316 161 aa13.15□□□□□ -0.3
SHANK2-201ENST00000338508 CCDC26Q8TAB7 109 aa13.15□□□□□ -0.3
SHANK2-201ENST00000338508 GNL1P36915 607 aaPredicted RBP13.15□□□□□ -0.3
SHANK2-201ENST00000338508 DCUN1D2Q6PH85 259 aa13.15□□□□□ -0.3
SHANK2-201ENST00000338508 NFATC2IPQ8NCF5 419 aa13.15□□□□□ -0.3
SHANK2-201ENST00000338508 WDR66Q8TBY9 1149 aa13.15□□□□□ -0.3
SHANK2-201ENST00000338508 MYCP01106 439 aaPredicted RBP13.15□□□□□ -0.3
SHANK2-201ENST00000338508 SAT1P21673 171 aa13.15□□□□□ -0.3
SHANK2-201ENST00000338508 RPL13P26373 211 aaKnown RBP13.15□□□□□ -0.3
SHANK2-201ENST00000338508 FOXD4Q12950 439 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms