RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 LY9Q9HBG7 655 aa6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 PDRG1Q9NUG6 133 aa6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 PGAP2Q9UHJ9 254 aa6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 PTPRFP10586 1907 aa6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 GNPATO15228 680 aa6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 GPAA1O43292 621 aa6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 FGAP02671 866 aa6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 GABPAQ06546 454 aa6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 CC2D2BQ6DHV5 1058 aa6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 ADGRA1Q86SQ6 560 aa6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 RBM17Q96I25 401 aaKnown RBP6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 LCTP09848 1927 aa6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 ZSCAN22P10073 491 aaPredicted RBP6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 COL23A1Q86Y22 540 aaPredicted RBP6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 PSMD1Q99460 953 aa6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 MAF1Q9H063 256 aa6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 ANO2Q9NQ90 1003 aa6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 SRP68Q9UHB9 627 aaKnown RBP6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 ZNF532Q9HCE3 1301 aa6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 M0R2N6 131 aa6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 ZKSCAN1P17029 563 aaPredicted RBP6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 TBC1D10CQ8IV04 446 aa6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 RILPL2Q969X0 211 aa6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 NLRP3Q96P20 1036 aa6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 SIL1Q9H173 461 aa6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 WWC3Q9ULE0 1092 aa6.38□□□□□ -1.39
PRPF4B-201ENST00000337659 MROH7-TTC4A0A0A0MT08 1334 aa6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 TRIM6-TRIM34B2RNG4 842 aa6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 GOLIM4O00461 696 aa6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 GRIN3BO60391 1043 aa6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 FDPSP14324 419 aaKnown RBP6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 PDIA3P30101 505 aaKnown RBP6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 TNFRSF25Q93038 417 aa6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 STK32BQ9NY57 414 aa6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 KCNA3P22001 575 aa6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 U2AF2P26368 475 aaKnown RBP eCLIP6.37□□□□□ -1.396e-42■□□□□ 9.6
PRPF4B-201ENST00000337659 EDC3Q96F86 508 aaKnown RBP6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 SNHG28P0DPA3 235 aa6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 NASPP49321 788 aaPredicted RBP6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 RHBDL3P58872 404 aa6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 HMGN5P82970 282 aaKnown RBP6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 PRPF40BQ6NWY9 871 aaKnown RBP6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 DAGLBQ8NCG7 672 aa6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 NKX2-3Q8TAU0 364 aa6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 WDR66Q8TBY9 1149 aa6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 SEC62Q99442 399 aaKnown RBP6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 COA1Q9GZY4 146 aa6.37□□□□□ -1.39
PRPF4B-201ENST00000337659 F13A1P00488 732 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 SERPINB2P05120 415 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 HCLS1P14317 486 aaPredicted RBP6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 NEK4P51957 841 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 SCRN1Q12765 414 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 HHIPL2Q6UWX4 724 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 HOMEZQ8IX15 550 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 IFNL3Q8IZI9 196 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 ZSCAN16Q9H4T2 348 aaPredicted RBP6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 ARPP21Q9UBL0 812 aaPredicted RBP6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 ZPR1O75312 459 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 CASTP20810 708 aaKnown RBP6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 OS9Q13438 667 aaPredicted RBP6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 SPTY2D1Q68D10 685 aaPredicted RBP6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 BLOC1S2Q6QNY1 142 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 PSDA5PKW4 1024 aaPredicted RBP6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 DDAH1O94760 285 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 GPTP24298 496 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 GPSM2P81274 684 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 GHRHRQ02643 423 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 MAP3K12Q12852 859 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 KIAA1211Q6ZU35 1233 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 DDX46Q7L014 1031 aaKnown RBP6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 TBC1D22AQ8WUA7 517 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 MTMR8Q96EF0 704 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 GBP4Q96PP9 640 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 DCAF8L1A6NGE4 600 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 ST5P78524 1137 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 CNBD1Q8NA66 436 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 TBC1D16Q8TBP0 767 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 GMLQ99445 158 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 KRT23Q9C075 422 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 ZSWIM8A7E2V4 1837 aa6.36□□□□□ -1.39
PRPF4B-201ENST00000337659 PDCP20941 246 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 SYT1P21579 422 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 PDE6BP35913 854 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 SEMA3FQ13275 785 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 CCDC178Q5BJE1 867 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 JARID2Q92833 1246 aaPredicted RBP6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 MASTLQ96GX5 879 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 PDLIM2Q96JY6 352 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 JAKMIP1Q96N16 626 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 NOL10Q9BSC4 688 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 IDI2Q9BXS1 227 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 DEFB129Q9H1M3 183 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 CHGBP05060 677 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 IMMTQ16891 758 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 AKNAD1Q5T1N1 836 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 FKBP1CQ5VVH2 108 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 C16orf86Q6ZW13 317 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 CYB5R4Q7L1T6 521 aa6.35□□□□□ -1.39
PRPF4B-201ENST00000337659 NCOA7Q8NI08 942 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms