RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 WDR78Q5VTH9 848 aa15.52■□□□□ 0.07
RTN4-202ENST00000337526 MLKLQ8NB16 471 aa15.52■□□□□ 0.07
RTN4-202ENST00000337526 CARD6Q9BX69 1037 aa15.52■□□□□ 0.07
RTN4-202ENST00000337526 HDXQ7Z353 690 aa15.52■□□□□ 0.07
RTN4-202ENST00000337526 TICAM2Q86XR7 235 aa15.52■□□□□ 0.07
RTN4-202ENST00000337526 PPP1R9BQ96SB3 815 aa15.52■□□□□ 0.07
RTN4-202ENST00000337526 CUTAO60888 179 aa15.51■□□□□ 0.07
RTN4-202ENST00000337526 CHMP4BP1P59074 171 aa15.51■□□□□ 0.07
RTN4-202ENST00000337526 RBM28Q9NW13 759 aaKnown RBP15.51■□□□□ 0.07
RTN4-202ENST00000337526 IMPACTQ9P2X3 320 aa15.51■□□□□ 0.07
RTN4-202ENST00000337526 NFE2L3Q9Y4A8 694 aa15.51■□□□□ 0.07
RTN4-202ENST00000337526 ZEB2O60315 1214 aa15.51■□□□□ 0.07
RTN4-202ENST00000337526 ITGA6P23229 1130 aa15.51■□□□□ 0.07
RTN4-202ENST00000337526 PRPHP41219 470 aa15.51■□□□□ 0.07
RTN4-202ENST00000337526 DNAJC21Q5F1R6 531 aaKnown RBP15.51■□□□□ 0.07
RTN4-202ENST00000337526 TPTE2Q6XPS3 522 aa15.51■□□□□ 0.07
RTN4-202ENST00000337526 SMAP1Q8IYB5 467 aaPredicted RBP15.51■□□□□ 0.07
RTN4-202ENST00000337526 IFT81Q8WYA0 676 aa15.51■□□□□ 0.07
RTN4-202ENST00000337526 NSFL1CQ9UNZ2 370 aaKnown RBP15.51■□□□□ 0.07
RTN4-202ENST00000337526 V9GY48 417 aaPredicted RBP15.51■□□□□ 0.07
RTN4-202ENST00000337526 ACTN2P35609 894 aa15.51■□□□□ 0.07
RTN4-202ENST00000337526 EIF4A1P60842 406 aaKnown RBP15.51■□□□□ 0.07
RTN4-202ENST00000337526 EDC3Q96F86 508 aaKnown RBP15.51■□□□□ 0.07
RTN4-202ENST00000337526 ELF2Q15723 593 aa15.5■□□□□ 0.07
RTN4-202ENST00000337526 DDB1Q16531 1140 aa15.5■□□□□ 0.07
RTN4-202ENST00000337526 NBPF11Q86T75 865 aa15.5■□□□□ 0.07
RTN4-202ENST00000337526 ARHGAP6O43182 974 aa15.5■□□□□ 0.07
RTN4-202ENST00000337526 USP37Q86T82 979 aa15.5■□□□□ 0.07
RTN4-202ENST00000337526 GPATCH11Q8N954 259 aa15.5■□□□□ 0.07
RTN4-202ENST00000337526 MAPK8IP1Q9UQF2 711 aa15.5■□□□□ 0.07
RTN4-202ENST00000337526 KRT40Q6A162 431 aa15.5■□□□□ 0.07
RTN4-202ENST00000337526 HS2ST1Q7LGA3 356 aa15.5■□□□□ 0.07
RTN4-202ENST00000337526 ARFGAP2Q8N6H7 521 aa15.5■□□□□ 0.07
RTN4-202ENST00000337526 DNAI2Q9GZS0 605 aa15.5■□□□□ 0.07
RTN4-202ENST00000337526 NEO1Q92859 1461 aa15.5■□□□□ 0.07
RTN4-202ENST00000337526 NLRP12P59046 1061 aa15.49■□□□□ 0.07
RTN4-202ENST00000337526 LETM2Q2VYF4 491 aa15.49■□□□□ 0.07
RTN4-202ENST00000337526 SMARCC2Q8TAQ2 1214 aa15.49■□□□□ 0.07
RTN4-202ENST00000337526 PHKBQ93100 1093 aa15.49■□□□□ 0.07
RTN4-202ENST00000337526 WDHD1O75717 1129 aaPredicted RBP15.49■□□□□ 0.07
RTN4-202ENST00000337526 ATP5JP18859 108 aa15.49■□□□□ 0.07
RTN4-202ENST00000337526 ZNF622Q969S3 477 aaKnown RBP eCLIP15.49■□□□□ 0.072e-35■□□□□ 10.6
RTN4-202ENST00000337526 BICD1Q96G01 975 aa15.49■□□□□ 0.07
RTN4-202ENST00000337526 A1BGP04217 495 aa15.49■□□□□ 0.07
RTN4-202ENST00000337526 ST5P78524 1137 aa15.49■□□□□ 0.07
RTN4-202ENST00000337526 ARMT1Q9H993 441 aa15.49■□□□□ 0.07
RTN4-202ENST00000337526 RASAL2Q9UJF2 1139 aa15.49■□□□□ 0.07
RTN4-202ENST00000337526 SPDYE3A6NKU9 549 aa15.49■□□□□ 0.07
RTN4-202ENST00000337526 PLCG2P16885 1265 aa15.49■□□□□ 0.07
RTN4-202ENST00000337526 PLCD1P51178 756 aa15.49■□□□□ 0.07
RTN4-202ENST00000337526 ZNF804AQ7Z570 1209 aa15.49■□□□□ 0.07
RTN4-202ENST00000337526 MICALL1Q8N3F8 863 aa15.49■□□□□ 0.07
RTN4-202ENST00000337526 HOMER2Q9NSB8 354 aa15.49■□□□□ 0.07
RTN4-202ENST00000337526 A0A1W2PRG0 241 aa15.48■□□□□ 0.07
RTN4-202ENST00000337526 PTH1RQ03431 593 aa15.48■□□□□ 0.07
RTN4-202ENST00000337526 CHAMP1Q96JM3 812 aa15.48■□□□□ 0.07
RTN4-202ENST00000337526 MYL10Q9BUA6 226 aa15.48■□□□□ 0.07
RTN4-202ENST00000337526 TTF2Q9UNY4 1162 aaKnown RBP15.48■□□□□ 0.07
RTN4-202ENST00000337526 MTMR6Q9Y217 621 aa15.48■□□□□ 0.07
RTN4-202ENST00000337526 PRDM1O75626 825 aa15.48■□□□□ 0.07
RTN4-202ENST00000337526 LDHBP07195 334 aaKnown RBP15.48■□□□□ 0.07
RTN4-202ENST00000337526 ZNF496Q96IT1 587 aaPredicted RBP15.48■□□□□ 0.07
RTN4-202ENST00000337526 NAPGQ99747 312 aaPredicted RBP15.48■□□□□ 0.07
RTN4-202ENST00000337526 NOC4LQ9BVI4 516 aaKnown RBP15.48■□□□□ 0.07
RTN4-202ENST00000337526 JAG2Q9Y219 1238 aa15.48■□□□□ 0.07
RTN4-202ENST00000337526 IKBKGQ9Y6K9 419 aa15.48■□□□□ 0.07
RTN4-202ENST00000337526 ZNF500O60304 480 aaPredicted RBP15.48■□□□□ 0.07
RTN4-202ENST00000337526 CFAP58Q5T655 872 aa15.48■□□□□ 0.07
RTN4-202ENST00000337526 OTUD6BQ8N6M0 293 aa15.48■□□□□ 0.07
RTN4-202ENST00000337526 EAF2Q96CJ1 260 aaPredicted RBP15.48■□□□□ 0.07
RTN4-202ENST00000337526 CCDC77Q9BR77 488 aa15.48■□□□□ 0.07
RTN4-202ENST00000337526 CTNND2Q9UQB3 1225 aa15.48■□□□□ 0.07
RTN4-202ENST00000337526 SH3TC1Q8TE82 1336 aa15.48■□□□□ 0.07
RTN4-202ENST00000337526 ZNF521Q96K83 1311 aa15.48■□□□□ 0.07
RTN4-202ENST00000337526 TRAF5O00463 557 aa15.48■□□□□ 0.07
RTN4-202ENST00000337526 PUM3Q15397 648 aaKnown RBP15.48■□□□□ 0.07
RTN4-202ENST00000337526 GPT2Q8TD30 523 aa15.48■□□□□ 0.07
RTN4-202ENST00000337526 FERMT2Q96AC1 680 aa15.48■□□□□ 0.07
RTN4-202ENST00000337526 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.48■□□□□ 0.07
RTN4-202ENST00000337526 PIK3AP1Q6ZUJ8 805 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 PCDH11XQ9BZA7 1347 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 PCDH11YQ9BZA8 1340 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 TLDC2A0PJX2 215 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 E7EWF7 191 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 SV2BQ7L1I2 683 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 SSH2Q76I76 1423 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 MAGI2Q86UL8 1455 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 KRT9P35527 623 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 PPP1R2P41236 205 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 TRIM14Q14142 442 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 TSC1Q92574 1164 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 NYXQ9GZU5 481 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 SLC52A2Q9HAB3 445 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 MRVI1Q9Y6F6 885 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 MAST1Q9Y2H9 1570 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 ATP10AO60312 1499 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 TOM1O60784 492 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 TNNC1P63316 161 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 PDE4DQ08499 809 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 FAM76AQ8TAV0 307 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms