RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 UGGT1Q9NYU2 1555 aa14.98□□□□□ -0.01
COL2A1-201ENST00000337299 PHLPP2Q6ZVD8 1323 aa14.98□□□□□ -0.01
COL2A1-201ENST00000337299 G3V3G9 751 aa14.97□□□□□ -0.01
COL2A1-201ENST00000337299 DCAF8Q5TAQ9 597 aa14.97□□□□□ -0.01
COL2A1-201ENST00000337299 KANK3Q6NY19 840 aa14.97□□□□□ -0.01
COL2A1-201ENST00000337299 CCDC42Q96M95 316 aa14.97□□□□□ -0.01
COL2A1-201ENST00000337299 TACO1Q9BSH4 297 aaKnown RBP14.97□□□□□ -0.01
COL2A1-201ENST00000337299 ZBTB43O43298 467 aa14.97□□□□□ -0.01
COL2A1-201ENST00000337299 PDE6BP35913 854 aa14.97□□□□□ -0.01
COL2A1-201ENST00000337299 ADALQ6DHV7 355 aa14.97□□□□□ -0.01
COL2A1-201ENST00000337299 CDC23Q9UJX2 597 aa14.97□□□□□ -0.01
COL2A1-201ENST00000337299 PLA2R1Q13018 1463 aa14.97□□□□□ -0.01
COL2A1-201ENST00000337299 E7EVH7 732 aa14.97□□□□□ -0.01
COL2A1-201ENST00000337299 GRM8O00222 908 aa14.97□□□□□ -0.01
COL2A1-201ENST00000337299 KRT18P05783 430 aaKnown RBP14.97□□□□□ -0.01
COL2A1-201ENST00000337299 TADA2BQ86TJ2 420 aa14.97□□□□□ -0.01
COL2A1-201ENST00000337299 SECISBP2LQ93073 1101 aaKnown RBP14.97□□□□□ -0.01
COL2A1-201ENST00000337299 NACAP1Q9BZK3 213 aa14.97□□□□□ -0.01
COL2A1-201ENST00000337299 CPSF2Q9P2I0 782 aaKnown RBP14.97□□□□□ -0.01
COL2A1-201ENST00000337299 TTF2Q9UNY4 1162 aaKnown RBP14.97□□□□□ -0.01
COL2A1-201ENST00000337299 ARID5AQ03989 594 aa14.97□□□□□ -0.01
COL2A1-201ENST00000337299 BRAPQ7Z569 592 aa14.97□□□□□ -0.01
COL2A1-201ENST00000337299 NCAPGQ9BPX3 1015 aa14.97□□□□□ -0.01
COL2A1-201ENST00000337299 SELENOSQ9BQE4 189 aa14.97□□□□□ -0.01
COL2A1-201ENST00000337299 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.97□□□□□ -0.01
COL2A1-201ENST00000337299 SSH2Q76I76 1423 aa14.97□□□□□ -0.01
COL2A1-201ENST00000337299 BUB1BO60566 1050 aaPredicted RBP14.96□□□□□ -0.01
COL2A1-201ENST00000337299 CLIC4Q9Y696 253 aa14.96□□□□□ -0.01
COL2A1-201ENST00000337299 ECM2O94769 699 aaPredicted RBP14.96□□□□□ -0.01
COL2A1-201ENST00000337299 DDX17Q92841 729 aaKnown RBP14.96□□□□□ -0.01
COL2A1-201ENST00000337299 TAB2Q9NYJ8 693 aa14.96□□□□□ -0.01
COL2A1-201ENST00000337299 FAM135BQ49AJ0 1406 aa14.96□□□□□ -0.02
COL2A1-201ENST00000337299 NAA16Q6N069 864 aaPredicted RBP14.96□□□□□ -0.02
COL2A1-201ENST00000337299 VEZTQ9HBM0 779 aa14.96□□□□□ -0.02
COL2A1-201ENST00000337299 MED4Q9NPJ6 270 aa14.96□□□□□ -0.02
COL2A1-201ENST00000337299 COBLO75128 1261 aa14.95□□□□□ -0.02
COL2A1-201ENST00000337299 ARHGAP25P42331 645 aa14.95□□□□□ -0.02
COL2A1-201ENST00000337299 PLA2G4AP47712 749 aa14.95□□□□□ -0.02
COL2A1-201ENST00000337299 KRT83P78385 493 aa14.95□□□□□ -0.02
COL2A1-201ENST00000337299 ATL3Q6DD88 541 aa14.95□□□□□ -0.02
COL2A1-201ENST00000337299 PHF23Q9BUL5 403 aaPredicted RBP14.95□□□□□ -0.02
COL2A1-201ENST00000337299 SAMD9LQ8IVG5 1584 aa14.95□□□□□ -0.02
COL2A1-201ENST00000337299 E4F1Q66K89 784 aaPredicted RBP14.95□□□□□ -0.02
COL2A1-201ENST00000337299 KRI1Q8N9T8 703 aaKnown RBP14.95□□□□□ -0.02
COL2A1-201ENST00000337299 CLIC6Q96NY7 704 aa14.95□□□□□ -0.02
COL2A1-201ENST00000337299 CDC5LQ99459 802 aaKnown RBP14.95□□□□□ -0.02
COL2A1-201ENST00000337299 MMRN2Q9H8L6 949 aa14.95□□□□□ -0.02
COL2A1-201ENST00000337299 MRPS25P82663 173 aaKnown RBP14.95□□□□□ -0.02
COL2A1-201ENST00000337299 MYSM1Q5VVJ2 828 aa14.95□□□□□ -0.02
COL2A1-201ENST00000337299 N4BP2L2Q92802 583 aaPredicted RBP14.95□□□□□ -0.02
COL2A1-201ENST00000337299 TBC1D31Q96DN5 1066 aa14.95□□□□□ -0.02
COL2A1-201ENST00000337299 TBX22Q9Y458 520 aa14.95□□□□□ -0.02
COL2A1-201ENST00000337299 PPFIA1Q13136 1202 aa14.95□□□□□ -0.02
COL2A1-201ENST00000337299 PHKBQ93100 1093 aa14.95□□□□□ -0.02
COL2A1-201ENST00000337299 FBXO3Q9UK99 471 aa14.95□□□□□ -0.02
COL2A1-201ENST00000337299 ODF2LQ9ULJ1 636 aa14.95□□□□□ -0.02
COL2A1-201ENST00000337299 ANKRD62A6NC57 917 aa14.94□□□□□ -0.02
COL2A1-201ENST00000337299 PPFIA4O75335 1185 aa14.94□□□□□ -0.02
COL2A1-201ENST00000337299 GCP02774 474 aa14.94□□□□□ -0.02
COL2A1-201ENST00000337299 UBE4AQ14139 1066 aa14.94□□□□□ -0.02
COL2A1-201ENST00000337299 PUS7Q96PZ0 661 aaKnown RBP14.94□□□□□ -0.02
COL2A1-201ENST00000337299 TTC37Q6PGP7 1564 aa14.94□□□□□ -0.02
COL2A1-201ENST00000337299 SPAG1Q07617 926 aa14.94□□□□□ -0.02
COL2A1-201ENST00000337299 TFCP2Q12800 502 aa14.94□□□□□ -0.02
COL2A1-201ENST00000337299 AMOTQ4VCS5 1084 aa14.94□□□□□ -0.02
COL2A1-201ENST00000337299 C8orf74Q6P047 294 aa14.94□□□□□ -0.02
COL2A1-201ENST00000337299 PLIN2Q99541 437 aa14.94□□□□□ -0.02
COL2A1-201ENST00000337299 CTNND2Q9UQB3 1225 aa14.94□□□□□ -0.02
COL2A1-201ENST00000337299 AOX1Q06278 1338 aa14.94□□□□□ -0.02
COL2A1-201ENST00000337299 ATP10AO60312 1499 aa14.94□□□□□ -0.02
COL2A1-201ENST00000337299 ERCC3P19447 782 aa14.94□□□□□ -0.02
COL2A1-201ENST00000337299 CCZ1BP86790 482 aa14.94□□□□□ -0.02
COL2A1-201ENST00000337299 CCZ1P86791 482 aaPredicted RBP14.94□□□□□ -0.02
COL2A1-201ENST00000337299 SCRN1Q12765 414 aa14.94□□□□□ -0.02
COL2A1-201ENST00000337299 IFT88Q13099 833 aa14.94□□□□□ -0.02
COL2A1-201ENST00000337299 ARFGAP2Q8N6H7 521 aa14.94□□□□□ -0.02
COL2A1-201ENST00000337299 TMX4Q9H1E5 349 aaPredicted RBP14.94□□□□□ -0.02
COL2A1-201ENST00000337299 SOWAHDA6NJG2 315 aa14.93□□□□□ -0.02
COL2A1-201ENST00000337299 IRX2Q9BZI1 471 aaPredicted RBP14.93□□□□□ -0.02
COL2A1-201ENST00000337299 SAR1BQ9Y6B6 198 aa14.93□□□□□ -0.02
COL2A1-201ENST00000337299 GUCY2FP51841 1108 aa14.93□□□□□ -0.02
COL2A1-201ENST00000337299 DBNDD2Q9BQY9 259 aa14.93□□□□□ -0.02
COL2A1-201ENST00000337299 STAP2Q9UGK3 403 aa14.93□□□□□ -0.02
COL2A1-201ENST00000337299 PCDHA5Q9Y5H7 936 aa14.93□□□□□ -0.02
COL2A1-201ENST00000337299 KDM5DQ9BY66 1539 aa14.93□□□□□ -0.02
COL2A1-201ENST00000337299 SEPT7Q16181 437 aaKnown RBP14.93□□□□□ -0.02
COL2A1-201ENST00000337299 METTL24Q5JXM2 366 aa14.93□□□□□ -0.02
COL2A1-201ENST00000337299 CADPS2Q86UW7 1296 aa14.93□□□□□ -0.02
COL2A1-201ENST00000337299 LLPHQ9BRT6 129 aaKnown RBP14.93□□□□□ -0.02
COL2A1-201ENST00000337299 MYL10Q9BUA6 226 aa14.93□□□□□ -0.02
COL2A1-201ENST00000337299 ZBTB3Q9H5J0 574 aa14.93□□□□□ -0.02
COL2A1-201ENST00000337299 ABCF2Q9UG63 623 aa14.93□□□□□ -0.02
COL2A1-201ENST00000337299 TMEM232C9JQI7 657 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 ZPR1O75312 459 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 TADA3O75528 432 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 MYCNP04198 464 aaPredicted RBP14.92□□□□□ -0.02
COL2A1-201ENST00000337299 NCAPH2Q6IBW4 605 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 ARMCX5Q6P1M9 558 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 EEF2KMTQ96G04 330 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 STX10O60499 249 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms