RNA–Protein interactions for RNA: ENST00000336915.10

SKAP1-201, Transcript of src kinase associated phosphoprotein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP1, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1-201ENST00000336915 MMP14P50281 582 aa10.59□□□□□ -0.71
SKAP1-201ENST00000336915 FOXO4P98177 505 aa10.59□□□□□ -0.71
SKAP1-201ENST00000336915 EPHA10Q5JZY3 1008 aa10.59□□□□□ -0.71
SKAP1-201ENST00000336915 CEP85Q6P2H3 762 aa10.59□□□□□ -0.71
SKAP1-201ENST00000336915 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.59□□□□□ -0.71
SKAP1-201ENST00000336915 ZNF804AQ7Z570 1209 aa10.59□□□□□ -0.71
SKAP1-201ENST00000336915 ANKRD13AQ8IZ07 590 aa10.59□□□□□ -0.71
SKAP1-201ENST00000336915 BRI3BPQ8WY22 251 aa10.59□□□□□ -0.71
SKAP1-201ENST00000336915 UTYO14607 1347 aa10.59□□□□□ -0.71
SKAP1-201ENST00000336915 TESPA1A2RU30 521 aaPredicted RBP10.58□□□□□ -0.72
SKAP1-201ENST00000336915 TCP10L2B9ZVM9 353 aa10.58□□□□□ -0.72
SKAP1-201ENST00000336915 VGLL4Q14135 290 aa10.58□□□□□ -0.72
SKAP1-201ENST00000336915 TAF1CQ15572 869 aaPredicted RBP10.58□□□□□ -0.72
SKAP1-201ENST00000336915 GRIK5Q16478 980 aa10.58□□□□□ -0.72
SKAP1-201ENST00000336915 SUPT20HL1Q3ZLR7 823 aa10.58□□□□□ -0.72
SKAP1-201ENST00000336915 SPDYE2Q495Y8 402 aa10.58□□□□□ -0.72
SKAP1-201ENST00000336915 SLC9C1Q4G0N8 1177 aa10.58□□□□□ -0.72
SKAP1-201ENST00000336915 C15orf52Q6ZUT6 534 aaKnown RBP10.58□□□□□ -0.72
SKAP1-201ENST00000336915 SH3TC2Q8TF17 1288 aa10.58□□□□□ -0.72
SKAP1-201ENST00000336915 TEPSINQ96N21 525 aa10.58□□□□□ -0.72
SKAP1-201ENST00000336915 TMEM39BQ9GZU3 492 aa10.58□□□□□ -0.72
SKAP1-201ENST00000336915 ZNF70Q9UC06 446 aaPredicted RBP10.58□□□□□ -0.72
SKAP1-201ENST00000336915 BRPF3Q9ULD4 1205 aa10.58□□□□□ -0.72
SKAP1-201ENST00000336915 PHIPQ8WWQ0 1821 aa10.58□□□□□ -0.72
SKAP1-201ENST00000336915 MYH2Q9UKX2 1941 aa10.58□□□□□ -0.72
SKAP1-201ENST00000336915 CCL15-CCL14A0A0B4J2E2 113 aa10.58□□□□□ -0.72
SKAP1-201ENST00000336915 UBTFL1P0CB47 393 aaPredicted RBP10.58□□□□□ -0.72
SKAP1-201ENST00000336915 GYG1P46976 350 aa10.58□□□□□ -0.72
SKAP1-201ENST00000336915 CACNB3P54284 484 aa10.58□□□□□ -0.72
SKAP1-201ENST00000336915 CCL15Q16663 113 aa10.58□□□□□ -0.72
SKAP1-201ENST00000336915 OTUD7BQ6GQQ9 843 aa10.58□□□□□ -0.72
SKAP1-201ENST00000336915 OTUD5Q96G74 571 aa10.58□□□□□ -0.72
SKAP1-201ENST00000336915 ATAD5Q96QE3 1844 aa10.57□□□□□ -0.72
SKAP1-201ENST00000336915 IFIT5Q13325 482 aaKnown RBP10.57□□□□□ -0.72
SKAP1-201ENST00000336915 HSP90AA2PQ14568 343 aaPredicted RBP10.57□□□□□ -0.72
SKAP1-201ENST00000336915 SLC4A8Q2Y0W8 1093 aa10.57□□□□□ -0.72
SKAP1-201ENST00000336915 MFSD14BQ5SR56 506 aa10.57□□□□□ -0.72
SKAP1-201ENST00000336915 LMBR1LQ6UX01 489 aa10.57□□□□□ -0.72
SKAP1-201ENST00000336915 TMEM106CQ9BVX2 250 aa10.57□□□□□ -0.72
SKAP1-201ENST00000336915 DCTPP1Q9H773 170 aa10.57□□□□□ -0.72
SKAP1-201ENST00000336915 TTF2Q9UNY4 1162 aaKnown RBP10.57□□□□□ -0.72
SKAP1-201ENST00000336915 IQSEC3Q9UPP2 1182 aaPredicted RBP10.57□□□□□ -0.72
SKAP1-201ENST00000336915 HDAC5Q9UQL6 1122 aa10.57□□□□□ -0.72
SKAP1-201ENST00000336915 RANBP2P49792 3224 aaKnown RBP10.56□□□□□ -0.72
SKAP1-201ENST00000336915 H0YGN5 161 aa10.56□□□□□ -0.72
SKAP1-201ENST00000336915 GRM8O00222 908 aa10.56□□□□□ -0.72
SKAP1-201ENST00000336915 HMMRO75330 724 aa10.56□□□□□ -0.72
SKAP1-201ENST00000336915 HSP90AA1P07900 732 aaKnown RBP10.56□□□□□ -0.72
SKAP1-201ENST00000336915 NBPF7P0C2Y1 421 aaPredicted RBP10.56□□□□□ -0.72
SKAP1-201ENST00000336915 FKBP1AP62942 108 aaKnown RBP10.56□□□□□ -0.72
SKAP1-201ENST00000336915 ATP8B2P98198 1209 aa10.56□□□□□ -0.72
SKAP1-201ENST00000336915 NUCB1Q02818 461 aa10.56□□□□□ -0.72
SKAP1-201ENST00000336915 L1TD1Q5T7N2 865 aaKnown RBP10.56□□□□□ -0.72
SKAP1-201ENST00000336915 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.56□□□□□ -0.72
SKAP1-201ENST00000336915 LRRFIP2Q9Y608 721 aaKnown RBP10.56□□□□□ -0.72
SKAP1-201ENST00000336915 COL6A3P12111 3177 aa10.56□□□□□ -0.72
SKAP1-201ENST00000336915 DOCK1Q14185 1865 aa10.55□□□□□ -0.72
SKAP1-201ENST00000336915 UNCXA6NJT0 531 aa10.55□□□□□ -0.72
SKAP1-201ENST00000336915 CTGFP29279 349 aa10.55□□□□□ -0.72
SKAP1-201ENST00000336915 CRKP46108 304 aa10.55□□□□□ -0.72
SKAP1-201ENST00000336915 SKAP1Q86WV1 359 aa10.55□□□□□ -0.72
SKAP1-201ENST00000336915 SHISA4Q96DD7 197 aa10.55□□□□□ -0.72
SKAP1-201ENST00000336915 PUS3Q9BZE2 481 aaKnown RBP10.55□□□□□ -0.72
SKAP1-201ENST00000336915 C9orf78Q9NZ63 289 aaPredicted RBP10.55□□□□□ -0.72
SKAP1-201ENST00000336915 SNCAIPQ9Y6H5 919 aa10.55□□□□□ -0.72
SKAP1-201ENST00000336915 FAM205AQ6ZU69 1335 aa10.55□□□□□ -0.72
SKAP1-201ENST00000336915 MTX1Q13505 466 aa10.54□□□□□ -0.72
SKAP1-201ENST00000336915 TNFAIP1Q13829 316 aa10.54□□□□□ -0.72
SKAP1-201ENST00000336915 MTFR1Q15390 333 aa10.54□□□□□ -0.72
SKAP1-201ENST00000336915 CHRDL2Q6WN34 429 aa10.54□□□□□ -0.72
SKAP1-201ENST00000336915 LDHAL6AQ6ZMR3 332 aa10.54□□□□□ -0.72
SKAP1-201ENST00000336915 TDRD7Q8NHU6 1098 aaKnown RBP10.54□□□□□ -0.72
SKAP1-201ENST00000336915 ZKSCAN4Q969J2 545 aaPredicted RBP10.54□□□□□ -0.72
SKAP1-201ENST00000336915 ZFYVE28Q9HCC9 887 aa10.54□□□□□ -0.72
SKAP1-201ENST00000336915 CNNM1Q9NRU3 951 aa10.54□□□□□ -0.72
SKAP1-201ENST00000336915 BTBD19C9JJ37 291 aa10.53□□□□□ -0.72
SKAP1-201ENST00000336915 GTF2A2P52657 109 aa10.53□□□□□ -0.72
SKAP1-201ENST00000336915 MAP3K9P80192 1104 aa10.53□□□□□ -0.72
SKAP1-201ENST00000336915 LACTBP83111 547 aaPredicted RBP10.53□□□□□ -0.72
SKAP1-201ENST00000336915 CHAF1AQ13111 956 aaPredicted RBP10.53□□□□□ -0.72
SKAP1-201ENST00000336915 POLA2Q14181 598 aa10.53□□□□□ -0.72
SKAP1-201ENST00000336915 TAF7LQ5H9L4 462 aa10.53□□□□□ -0.72
SKAP1-201ENST00000336915 SSH3Q8TE77 659 aa10.53□□□□□ -0.72
SKAP1-201ENST00000336915 FAM84BQ96KN1 310 aaPredicted RBP10.53□□□□□ -0.72
SKAP1-201ENST00000336915 SERPINA10Q9UK55 444 aa10.53□□□□□ -0.72
SKAP1-201ENST00000336915 PNMA6EA0A0J9YXQ4 647 aa10.53□□□□□ -0.72
SKAP1-201ENST00000336915 SPDYE5A6NIY4 337 aa10.53□□□□□ -0.72
SKAP1-201ENST00000336915 IRF6O14896 467 aa10.53□□□□□ -0.72
SKAP1-201ENST00000336915 CCDC57Q2TAC2 916 aa10.53□□□□□ -0.72
SKAP1-201ENST00000336915 NBPF11Q86T75 865 aa10.53□□□□□ -0.72
SKAP1-201ENST00000336915 CHD1LQ86WJ1 897 aa10.53□□□□□ -0.72
SKAP1-201ENST00000336915 KAZALD1Q96I82 304 aa10.53□□□□□ -0.72
SKAP1-201ENST00000336915 WRNIP1Q96S55 665 aa10.53□□□□□ -0.72
SKAP1-201ENST00000336915 CSADQ9Y600 493 aa10.53□□□□□ -0.72
SKAP1-201ENST00000336915 TLR2O60603 784 aa10.52□□□□□ -0.73
SKAP1-201ENST00000336915 HIBADHP31937 336 aaKnown RBP10.52□□□□□ -0.73
SKAP1-201ENST00000336915 SUCLG2Q96I99 432 aa10.52□□□□□ -0.73
SKAP1-201ENST00000336915 RBM27Q9P2N5 1060 aaKnown RBP10.52□□□□□ -0.73
SKAP1-201ENST00000336915 CPA4Q9UI42 421 aa10.52□□□□□ -0.73
SKAP1-201ENST00000336915 PDE4AP27815 886 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms