RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 RAB11FIP4Q86YS3 637 aa19.48■□□□□ 0.71
TMEM39B-201ENST00000336294 CLSTN2Q9H4D0 955 aa19.48■□□□□ 0.71
TMEM39B-201ENST00000336294 RAI14Q9P0K7 980 aa19.48■□□□□ 0.71
TMEM39B-201ENST00000336294 NOL7Q9UMY1 257 aaKnown RBP19.48■□□□□ 0.71
TMEM39B-201ENST00000336294 TAF1P21675 1872 aa19.48■□□□□ 0.71
TMEM39B-201ENST00000336294 PRKAB2O43741 272 aa19.48■□□□□ 0.71
TMEM39B-201ENST00000336294 TMEM67Q5HYA8 995 aa19.48■□□□□ 0.71
TMEM39B-201ENST00000336294 MEX3CQ5U5Q3 659 aaKnown RBP19.48■□□□□ 0.71
TMEM39B-201ENST00000336294 CPLX2Q6PUV4 134 aaKnown RBP19.48■□□□□ 0.71
TMEM39B-201ENST00000336294 APOA5Q6Q788 366 aa19.48■□□□□ 0.71
TMEM39B-201ENST00000336294 MFSD6Q6ZSS7 791 aa19.48■□□□□ 0.71
TMEM39B-201ENST00000336294 SGMS1Q86VZ5 419 aa19.48■□□□□ 0.71
TMEM39B-201ENST00000336294 MIGA1Q8NAN2 632 aa19.48■□□□□ 0.71
TMEM39B-201ENST00000336294 IGDCC4Q8TDY8 1250 aa19.48■□□□□ 0.71
TMEM39B-201ENST00000336294 STAG1Q8WVM7 1258 aa19.48■□□□□ 0.71
TMEM39B-201ENST00000336294 GJD4Q96KN9 370 aaPredicted RBP19.48■□□□□ 0.71
TMEM39B-201ENST00000336294 ABCF2Q9UG63 623 aa19.48■□□□□ 0.71
TMEM39B-201ENST00000336294 SEMA3EO15041 775 aa19.47■□□□□ 0.71
TMEM39B-201ENST00000336294 LIFRP42702 1097 aa19.47■□□□□ 0.71
TMEM39B-201ENST00000336294 CEBPZQ03701 1054 aaKnown RBP19.47■□□□□ 0.71
TMEM39B-201ENST00000336294 FAM182BQ5T319 152 aa19.47■□□□□ 0.71
TMEM39B-201ENST00000336294 NFXL1Q6ZNB6 911 aa19.47■□□□□ 0.71
TMEM39B-201ENST00000336294 FBXO18Q8NFZ0 1043 aa19.47■□□□□ 0.71
TMEM39B-201ENST00000336294 NKX2-3Q8TAU0 364 aa19.47■□□□□ 0.71
TMEM39B-201ENST00000336294 ARHGEF1Q92888 912 aaKnown RBP19.47■□□□□ 0.71
TMEM39B-201ENST00000336294 USP28Q96RU2 1077 aa19.47■□□□□ 0.71
TMEM39B-201ENST00000336294 ANKRD2Q9GZV1 360 aa19.47■□□□□ 0.71
TMEM39B-201ENST00000336294 LY9Q9HBG7 655 aa19.47■□□□□ 0.71
TMEM39B-201ENST00000336294 CCDC39Q9UFE4 941 aa19.47■□□□□ 0.71
TMEM39B-201ENST00000336294 COL1A1P02452 1464 aaPredicted RBP19.47■□□□□ 0.71
TMEM39B-201ENST00000336294 TAF1LQ8IZX4 1826 aa19.47■□□□□ 0.71
TMEM39B-201ENST00000336294 MAGEB6P1A0A0J9YX57 407 aa19.46■□□□□ 0.71
TMEM39B-201ENST00000336294 ZBTB43O43298 467 aa19.46■□□□□ 0.71
TMEM39B-201ENST00000336294 FAM84BQ96KN1 310 aaPredicted RBP19.46■□□□□ 0.71
TMEM39B-201ENST00000336294 IFIT3O14879 490 aaKnown RBP19.46■□□□□ 0.71
TMEM39B-201ENST00000336294 ZNF500O60304 480 aaPredicted RBP19.46■□□□□ 0.71
TMEM39B-201ENST00000336294 KDM4AO75164 1064 aa19.46■□□□□ 0.71
TMEM39B-201ENST00000336294 CAMK4Q16566 473 aa19.46■□□□□ 0.71
TMEM39B-201ENST00000336294 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.46■□□□□ 0.71
TMEM39B-201ENST00000336294 RBM43Q6ZSC3 357 aaKnown RBP19.46■□□□□ 0.71
TMEM39B-201ENST00000336294 BRAPQ7Z569 592 aa19.46■□□□□ 0.71
TMEM39B-201ENST00000336294 RNF41Q9H4P4 317 aaPredicted RBP19.46■□□□□ 0.71
TMEM39B-201ENST00000336294 ZSWIM5Q9P217 1185 aa19.46■□□□□ 0.71
TMEM39B-201ENST00000336294 NR1I2O75469 434 aa19.45■□□□□ 0.7
TMEM39B-201ENST00000336294 FBXO33Q7Z6M2 555 aa19.45■□□□□ 0.7
TMEM39B-201ENST00000336294 MTA3Q9BTC8 594 aa19.45■□□□□ 0.7
TMEM39B-201ENST00000336294 PDS5AQ29RF7 1337 aaKnown RBP19.45■□□□□ 0.7
TMEM39B-201ENST00000336294 CCDC69A6NI79 296 aa19.44■□□□□ 0.7
TMEM39B-201ENST00000336294 WTIPA6NIX2 430 aaPredicted RBP19.44■□□□□ 0.7
TMEM39B-201ENST00000336294 GOLGA8AA7E2F4 631 aa19.44■□□□□ 0.7
TMEM39B-201ENST00000336294 TPM2P07951 284 aa19.44■□□□□ 0.7
TMEM39B-201ENST00000336294 TERF1P54274 439 aa19.44■□□□□ 0.7
TMEM39B-201ENST00000336294 SART3Q15020 963 aaKnown RBP19.44■□□□□ 0.7
TMEM39B-201ENST00000336294 OTUD7BQ6GQQ9 843 aa19.44■□□□□ 0.7
TMEM39B-201ENST00000336294 MICU3Q86XE3 530 aa19.44■□□□□ 0.7
TMEM39B-201ENST00000336294 FTOQ9C0B1 505 aaKnown RBP eCLIP19.44■□□□□ 0.7
TMEM39B-201ENST00000336294 INCENPQ9NQS7 918 aa19.44■□□□□ 0.7
TMEM39B-201ENST00000336294 RTEL1Q9NZ71 1219 aa19.44■□□□□ 0.7
TMEM39B-201ENST00000336294 RFC4P35249 363 aa19.44■□□□□ 0.7
TMEM39B-201ENST00000336294 TYRO3Q06418 890 aa19.44■□□□□ 0.7
TMEM39B-201ENST00000336294 SYNE3Q6ZMZ3 975 aa19.44■□□□□ 0.7
TMEM39B-201ENST00000336294 ADGRA1Q86SQ6 560 aa19.44■□□□□ 0.7
TMEM39B-201ENST00000336294 SENP2Q9HC62 589 aa19.44■□□□□ 0.7
TMEM39B-201ENST00000336294 SLC12A7Q9Y666 1083 aa19.44■□□□□ 0.7
TMEM39B-201ENST00000336294 TACC3Q9Y6A5 838 aa19.44■□□□□ 0.7
TMEM39B-201ENST00000336294 SBF2Q86WG5 1849 aa19.44■□□□□ 0.7
TMEM39B-201ENST00000336294 CACNA1SQ13698 1873 aa19.43■□□□□ 0.7
TMEM39B-201ENST00000336294 OFD1O75665 1012 aa19.43■□□□□ 0.7
TMEM39B-201ENST00000336294 PPARAQ07869 468 aa19.43■□□□□ 0.7
TMEM39B-201ENST00000336294 TRAPPC3LQ5T215 181 aa19.43■□□□□ 0.7
TMEM39B-201ENST00000336294 CCAR1Q8IX12 1150 aaKnown RBP19.43■□□□□ 0.7
TMEM39B-201ENST00000336294 TOMM22Q9NS69 142 aa19.43■□□□□ 0.7
TMEM39B-201ENST00000336294 USP25Q9UHP3 1055 aa19.43■□□□□ 0.7
TMEM39B-201ENST00000336294 ZKSCAN5Q9Y2L8 839 aa19.43■□□□□ 0.7
TMEM39B-201ENST00000336294 NPHP1O15259 732 aa19.42■□□□□ 0.7
TMEM39B-201ENST00000336294 CDC27P30260 824 aa19.42■□□□□ 0.7
TMEM39B-201ENST00000336294 RRP12Q5JTH9 1297 aaKnown RBP19.42■□□□□ 0.7
TMEM39B-201ENST00000336294 CCDC73Q6ZRK6 1079 aa19.42■□□□□ 0.7
TMEM39B-201ENST00000336294 AMIGO3Q86WK7 504 aa19.42■□□□□ 0.7
TMEM39B-201ENST00000336294 RIOK1Q9BRS2 568 aaKnown RBP19.42■□□□□ 0.7
TMEM39B-201ENST00000336294 ALG1Q9BT22 464 aa19.42■□□□□ 0.7
TMEM39B-201ENST00000336294 ANAPC4Q9UJX5 808 aa19.42■□□□□ 0.7
TMEM39B-201ENST00000336294 AFF2P51816 1311 aa19.42■□□□□ 0.7
TMEM39B-201ENST00000336294 NID2Q14112 1375 aa19.42■□□□□ 0.7
TMEM39B-201ENST00000336294 ERICH2A1L162 156 aa19.41■□□□□ 0.7
TMEM39B-201ENST00000336294 ONECUT3O60422 494 aaPredicted RBP19.41■□□□□ 0.7
TMEM39B-201ENST00000336294 RXRAP19793 462 aa19.41■□□□□ 0.7
TMEM39B-201ENST00000336294 ME1P48163 572 aa19.41■□□□□ 0.7
TMEM39B-201ENST00000336294 CKAP2LQ8IYA6 745 aa19.41■□□□□ 0.7
TMEM39B-201ENST00000336294 FAM200AQ8TCP9 573 aa19.41■□□□□ 0.7
TMEM39B-201ENST00000336294 MRVI1Q9Y6F6 885 aa19.41■□□□□ 0.7
TMEM39B-201ENST00000336294 STK36Q9NRP7 1315 aa19.41■□□□□ 0.7
TMEM39B-201ENST00000336294 CTAGE5O15320 804 aa19.41■□□□□ 0.7
TMEM39B-201ENST00000336294 YEATS4O95619 227 aa19.41■□□□□ 0.7
TMEM39B-201ENST00000336294 PTMAP06454 111 aaKnown RBP19.41■□□□□ 0.7
TMEM39B-201ENST00000336294 HIBADHP31937 336 aaKnown RBP19.41■□□□□ 0.7
TMEM39B-201ENST00000336294 IARSP41252 1262 aaKnown RBP19.41■□□□□ 0.7
TMEM39B-201ENST00000336294 KIF23Q02241 960 aaPredicted RBP19.41■□□□□ 0.7
TMEM39B-201ENST00000336294 WTAPQ15007 396 aa19.41■□□□□ 0.7
TMEM39B-201ENST00000336294 TMTC2Q8N394 836 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms