RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 PDE8BO95263 885 aa10.38□□□□□ -0.75
LSAMP-201ENST00000333617 BRD1O95696 1058 aa10.38□□□□□ -0.75
LSAMP-201ENST00000333617 HCLS1P14317 486 aaPredicted RBP10.38□□□□□ -0.75
LSAMP-201ENST00000333617 ANKRD1Q15327 319 aa10.38□□□□□ -0.75
LSAMP-201ENST00000333617 ZMYM1Q5SVZ6 1142 aa10.38□□□□□ -0.75
LSAMP-201ENST00000333617 VGLL2Q8N8G2 317 aa10.38□□□□□ -0.75
LSAMP-201ENST00000333617 GZF1Q9H116 711 aaPredicted RBP10.38□□□□□ -0.75
LSAMP-201ENST00000333617 C4AP0C0L4 1744 aa10.38□□□□□ -0.75
LSAMP-201ENST00000333617 C4BP0C0L5 1744 aa10.38□□□□□ -0.75
LSAMP-201ENST00000333617 NTSR2O95665 410 aa10.37□□□□□ -0.75
LSAMP-201ENST00000333617 ZFYP08048 801 aaPredicted RBP10.37□□□□□ -0.75
LSAMP-201ENST00000333617 RPS6KB1P23443 525 aa10.37□□□□□ -0.75
LSAMP-201ENST00000333617 CLEC4GQ6UXB4 293 aa10.37□□□□□ -0.75
LSAMP-201ENST00000333617 LINC00116Q8NCU8 138 aa10.37□□□□□ -0.75
LSAMP-201ENST00000333617 ZNF512BQ96KM6 892 aaPredicted RBP10.37□□□□□ -0.75
LSAMP-201ENST00000333617 DSCC1Q9BVC3 393 aa10.37□□□□□ -0.75
LSAMP-201ENST00000333617 ALDH8A1Q9H2A2 487 aaPredicted RBP10.37□□□□□ -0.75
LSAMP-201ENST00000333617 CNTNAP4Q9C0A0 1308 aa10.37□□□□□ -0.75
LSAMP-201ENST00000333617 WDR33Q9C0J8 1336 aaKnown RBP10.37□□□□□ -0.75
LSAMP-201ENST00000333617 LARGE1O95461 756 aa10.36□□□□□ -0.75
LSAMP-201ENST00000333617 ZAP70P43403 619 aa10.36□□□□□ -0.75
LSAMP-201ENST00000333617 PUM3Q15397 648 aaKnown RBP10.36□□□□□ -0.75
LSAMP-201ENST00000333617 CCDC152Q4G0S7 254 aa10.36□□□□□ -0.75
LSAMP-201ENST00000333617 L1TD1Q5T7N2 865 aaKnown RBP10.36□□□□□ -0.75
LSAMP-201ENST00000333617 MEX3CQ5U5Q3 659 aaKnown RBP10.36□□□□□ -0.75
LSAMP-201ENST00000333617 FOXD4L5Q5VV16 416 aaPredicted RBP10.36□□□□□ -0.75
LSAMP-201ENST00000333617 CCDC83Q8IWF9 413 aa10.36□□□□□ -0.75
LSAMP-201ENST00000333617 FOXD4L4Q8WXT5 416 aaPredicted RBP10.36□□□□□ -0.75
LSAMP-201ENST00000333617 SMC3Q9UQE7 1217 aa10.36□□□□□ -0.75
LSAMP-201ENST00000333617 TAF6LQ9Y6J9 622 aa10.36□□□□□ -0.75
LSAMP-201ENST00000333617 BRWD3Q6RI45 1802 aa10.36□□□□□ -0.75
LSAMP-201ENST00000333617 MAST3O60307 1309 aa10.36□□□□□ -0.75
LSAMP-201ENST00000333617 RTL9Q8NET4 1388 aa10.36□□□□□ -0.75
LSAMP-201ENST00000333617 CCDC88AQ3V6T2 1871 aa10.35□□□□□ -0.75
LSAMP-201ENST00000333617 CYP21A2P08686 494 aa10.35□□□□□ -0.75
LSAMP-201ENST00000333617 SCARF1Q14162 830 aa10.35□□□□□ -0.75
LSAMP-201ENST00000333617 SLFNL1Q499Z3 407 aa10.35□□□□□ -0.75
LSAMP-201ENST00000333617 NEK1Q96PY6 1258 aa10.35□□□□□ -0.75
LSAMP-201ENST00000333617 MPHOSPH8Q99549 860 aa10.35□□□□□ -0.75
LSAMP-201ENST00000333617 DDX49Q9Y6V7 483 aaKnown RBP10.35□□□□□ -0.75
LSAMP-201ENST00000333617 GOLGA6L3A6NEY3 463 aa10.35□□□□□ -0.75
LSAMP-201ENST00000333617 M0R2C6 588 aa10.35□□□□□ -0.75
LSAMP-201ENST00000333617 HSPD1P10809 573 aaKnown RBP10.35□□□□□ -0.75
LSAMP-201ENST00000333617 IGHMBP2P38935 993 aaKnown RBP10.35□□□□□ -0.75
LSAMP-201ENST00000333617 MCAMP43121 646 aa10.35□□□□□ -0.75
LSAMP-201ENST00000333617 TTF1Q15361 905 aaPredicted RBP10.35□□□□□ -0.75
LSAMP-201ENST00000333617 ME3Q16798 604 aa10.35□□□□□ -0.75
LSAMP-201ENST00000333617 WASHC4Q2M389 1173 aa10.35□□□□□ -0.75
LSAMP-201ENST00000333617 KLHL40Q2TBA0 621 aa10.35□□□□□ -0.75
LSAMP-201ENST00000333617 RC3H1Q5TC82 1133 aaKnown RBP10.35□□□□□ -0.75
LSAMP-201ENST00000333617 ZSCAN25Q6NSZ9 544 aa10.35□□□□□ -0.75
LSAMP-201ENST00000333617 LPIN2Q92539 896 aa10.35□□□□□ -0.75
LSAMP-201ENST00000333617 TMUB1Q9BVT8 246 aa10.35□□□□□ -0.75
LSAMP-201ENST00000333617 PRKD2Q9BZL6 878 aa10.35□□□□□ -0.75
LSAMP-201ENST00000333617 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.35□□□□□ -0.75
LSAMP-201ENST00000333617 LMBRD1Q9NUN5 540 aa10.35□□□□□ -0.75
LSAMP-201ENST00000333617 TPCN1Q9ULQ1 816 aa10.35□□□□□ -0.75
LSAMP-201ENST00000333617 UBR3Q6ZT12 1888 aa10.34□□□□□ -0.75
LSAMP-201ENST00000333617 PRPF40AO75400 957 aaKnown RBP10.34□□□□□ -0.75
LSAMP-201ENST00000333617 HMGB1P09429 215 aaKnown RBP10.34□□□□□ -0.75
LSAMP-201ENST00000333617 UQCRFS1P1P0C7P4 283 aa10.34□□□□□ -0.75
LSAMP-201ENST00000333617 SLC5A1P13866 664 aa10.34□□□□□ -0.75
LSAMP-201ENST00000333617 FGFR2P21802 821 aa10.34□□□□□ -0.75
LSAMP-201ENST00000333617 ARID4AP29374 1257 aaPredicted RBP10.34□□□□□ -0.75
LSAMP-201ENST00000333617 KCNQ4P56696 695 aa10.34□□□□□ -0.75
LSAMP-201ENST00000333617 CCDC102BQ68D86 513 aa10.34□□□□□ -0.75
LSAMP-201ENST00000333617 PTF1AQ7RTS3 328 aa10.34□□□□□ -0.75
LSAMP-201ENST00000333617 HELBQ8NG08 1087 aaPredicted RBP10.34□□□□□ -0.75
LSAMP-201ENST00000333617 APPBP2Q92624 585 aa10.34□□□□□ -0.75
LSAMP-201ENST00000333617 OSBP2Q969R2 916 aa10.34□□□□□ -0.75
LSAMP-201ENST00000333617 TCEANC2Q96MN5 208 aa10.34□□□□□ -0.75
LSAMP-201ENST00000333617 SEC31BQ9NQW1 1179 aa10.34□□□□□ -0.75
LSAMP-201ENST00000333617 FSD2A1L4K1 749 aa10.33□□□□□ -0.76
LSAMP-201ENST00000333617 STX6O43752 255 aa10.33□□□□□ -0.76
LSAMP-201ENST00000333617 NR1I2O75469 434 aa10.33□□□□□ -0.76
LSAMP-201ENST00000333617 SYT1P21579 422 aa10.33□□□□□ -0.76
LSAMP-201ENST00000333617 GJB2P29033 226 aa10.33□□□□□ -0.76
LSAMP-201ENST00000333617 PHKA1P46020 1223 aa10.33□□□□□ -0.76
LSAMP-201ENST00000333617 COL9A3Q14050 684 aaPredicted RBP10.33□□□□□ -0.76
LSAMP-201ENST00000333617 TOB2Q14106 344 aaPredicted RBP10.33□□□□□ -0.76
LSAMP-201ENST00000333617 PI16Q6UXB8 463 aa10.33□□□□□ -0.76
LSAMP-201ENST00000333617 NECAB1Q8N987 351 aa10.33□□□□□ -0.76
LSAMP-201ENST00000333617 GJD4Q96KN9 370 aaPredicted RBP10.33□□□□□ -0.76
LSAMP-201ENST00000333617 ISY1Q9ULR0 285 aaKnown RBP10.33□□□□□ -0.76
LSAMP-201ENST00000333617 EP400Q96L91 3159 aa10.32□□□□□ -0.76
LSAMP-201ENST00000333617 RPS6KA4O75676 772 aa10.32□□□□□ -0.76
LSAMP-201ENST00000333617 ATRNO75882 1429 aa10.32□□□□□ -0.76
LSAMP-201ENST00000333617 COL4A1P02462 1669 aa10.32□□□□□ -0.76
LSAMP-201ENST00000333617 ZSCAN22P10073 491 aaPredicted RBP10.32□□□□□ -0.76
LSAMP-201ENST00000333617 AFF2P51816 1311 aa10.32□□□□□ -0.76
LSAMP-201ENST00000333617 ST3GAL1Q11201 340 aa10.32□□□□□ -0.76
LSAMP-201ENST00000333617 ZNF787Q6DD87 383 aa10.32□□□□□ -0.76
LSAMP-201ENST00000333617 Q6ZUG5 572 aa10.32□□□□□ -0.76
LSAMP-201ENST00000333617 RDH13Q8NBN7 331 aa10.32□□□□□ -0.76
LSAMP-201ENST00000333617 CDC5LQ99459 802 aaKnown RBP10.32□□□□□ -0.76
LSAMP-201ENST00000333617 CTNNA3Q9UI47 895 aa10.32□□□□□ -0.76
LSAMP-201ENST00000333617 CCNL1Q9UK58 526 aaPredicted RBP10.32□□□□□ -0.76
LSAMP-201ENST00000333617 V9GY48 417 aaPredicted RBP10.32□□□□□ -0.76
LSAMP-201ENST00000333617 PDIA4P13667 645 aaKnown RBP10.31□□□□□ -0.76
LSAMP-201ENST00000333617 NCLP19338 710 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms