RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 HSP90AA4PQ58FG1 418 aa14.28□□□□□ -0.12
VPS33B-201ENST00000333371 FBXL16Q8N461 479 aa14.28□□□□□ -0.12
VPS33B-201ENST00000333371 DPF2Q92785 391 aa14.28□□□□□ -0.12
VPS33B-201ENST00000333371 ALG1Q9BT22 464 aa14.28□□□□□ -0.12
VPS33B-201ENST00000333371 PIH1D3Q9NQM4 214 aaKnown RBP14.28□□□□□ -0.12
VPS33B-201ENST00000333371 AKAP2Q9Y2D5 859 aa14.28□□□□□ -0.12
VPS33B-201ENST00000333371 ECM29Q5VYK3 1845 aa14.27□□□□□ -0.12
VPS33B-201ENST00000333371 RIC1Q4ADV7 1423 aa14.27□□□□□ -0.12
VPS33B-201ENST00000333371 COL22A1Q8NFW1 1626 aaPredicted RBP14.27□□□□□ -0.12
VPS33B-201ENST00000333371 SNAP23O00161 211 aa14.27□□□□□ -0.12
VPS33B-201ENST00000333371 PNOCQ13519 176 aa14.27□□□□□ -0.12
VPS33B-201ENST00000333371 KMT5BQ4FZB7 885 aa14.27□□□□□ -0.12
VPS33B-201ENST00000333371 SPECC1Q5M775 1068 aa14.27□□□□□ -0.12
VPS33B-201ENST00000333371 VPS37DQ86XT2 251 aa14.27□□□□□ -0.12
VPS33B-201ENST00000333371 STK11IPQ8N1F8 1099 aa14.27□□□□□ -0.12
VPS33B-201ENST00000333371 HSD3B7Q9H2F3 369 aa14.27□□□□□ -0.12
VPS33B-201ENST00000333371 BCL9O00512 1426 aa14.27□□□□□ -0.13
VPS33B-201ENST00000333371 DHX16O60231 1041 aaKnown RBP14.27□□□□□ -0.13
VPS33B-201ENST00000333371 ZFYP08048 801 aaPredicted RBP14.27□□□□□ -0.13
VPS33B-201ENST00000333371 NLRP12P59046 1061 aa14.27□□□□□ -0.13
VPS33B-201ENST00000333371 LDHAL6AQ6ZMR3 332 aa14.27□□□□□ -0.13
VPS33B-201ENST00000333371 HELBQ8NG08 1087 aaPredicted RBP14.27□□□□□ -0.13
VPS33B-201ENST00000333371 OSBPL5Q9H0X9 879 aaPredicted RBP14.27□□□□□ -0.13
VPS33B-201ENST00000333371 PLCH1Q4KWH8 1693 aa14.27□□□□□ -0.13
VPS33B-201ENST00000333371 MAP3K15Q6ZN16 1313 aa14.26□□□□□ -0.13
VPS33B-201ENST00000333371 METAP2P50579 478 aaKnown RBP eCLIP14.26□□□□□ -0.13
VPS33B-201ENST00000333371 KRT40Q6A162 431 aa14.26□□□□□ -0.13
VPS33B-201ENST00000333371 SHC4Q6S5L8 630 aa14.26□□□□□ -0.13
VPS33B-201ENST00000333371 BRAPQ7Z569 592 aa14.26□□□□□ -0.13
VPS33B-201ENST00000333371 PPP1R13BQ96KQ4 1090 aa14.26□□□□□ -0.13
VPS33B-201ENST00000333371 WWC3Q9ULE0 1092 aa14.26□□□□□ -0.13
VPS33B-201ENST00000333371 ITGA6P23229 1130 aa14.26□□□□□ -0.13
VPS33B-201ENST00000333371 SYT10Q6XYQ8 523 aa14.26□□□□□ -0.13
VPS33B-201ENST00000333371 FOXN1O15353 648 aa14.25□□□□□ -0.13
VPS33B-201ENST00000333371 PCCAP05165 728 aaPredicted RBP14.25□□□□□ -0.13
VPS33B-201ENST00000333371 CMA1P23946 247 aa14.25□□□□□ -0.13
VPS33B-201ENST00000333371 SYKP43405 635 aa14.25□□□□□ -0.13
VPS33B-201ENST00000333371 TRIM28Q13263 835 aaKnown RBP14.25□□□□□ -0.13
VPS33B-201ENST00000333371 SLC39A14Q15043 492 aa14.25□□□□□ -0.13
VPS33B-201ENST00000333371 SYCP1Q15431 976 aa14.25□□□□□ -0.13
VPS33B-201ENST00000333371 ANGEL1Q9UNK9 670 aaKnown RBP14.25□□□□□ -0.13
VPS33B-201ENST00000333371 RIPOR2Q9Y4F9 1068 aa14.25□□□□□ -0.13
VPS33B-201ENST00000333371 RANBP6O60518 1105 aaKnown RBP14.25□□□□□ -0.13
VPS33B-201ENST00000333371 SFPQP23246 707 aaKnown RBP eCLIP14.25□□□□□ -0.13
VPS33B-201ENST00000333371 ADD2P35612 726 aa14.25□□□□□ -0.13
VPS33B-201ENST00000333371 PHKA1P46020 1223 aa14.25□□□□□ -0.13
VPS33B-201ENST00000333371 GSDMDP57764 484 aa14.25□□□□□ -0.13
VPS33B-201ENST00000333371 FANCCQ00597 558 aa14.25□□□□□ -0.13
VPS33B-201ENST00000333371 FBXO38Q6PIJ6 1188 aa14.25□□□□□ -0.13
VPS33B-201ENST00000333371 GIGYF2Q6Y7W6 1299 aaKnown RBP14.25□□□□□ -0.13
VPS33B-201ENST00000333371 KIF18AQ8NI77 898 aa14.25□□□□□ -0.13
VPS33B-201ENST00000333371 CNNM1Q9NRU3 951 aa14.25□□□□□ -0.13
VPS33B-201ENST00000333371 CGNQ9P2M7 1197 aaKnown RBP14.25□□□□□ -0.13
VPS33B-201ENST00000333371 WNK3Q9BYP7 1800 aa14.25□□□□□ -0.13
VPS33B-201ENST00000333371 ZNF532Q9HCE3 1301 aa14.25□□□□□ -0.13
VPS33B-201ENST00000333371 LRP6O75581 1613 aa14.24□□□□□ -0.13
VPS33B-201ENST00000333371 NUTM2BA6NNL0 878 aaPredicted RBP14.24□□□□□ -0.13
VPS33B-201ENST00000333371 NUTM2EB1AL46 878 aaPredicted RBP14.24□□□□□ -0.13
VPS33B-201ENST00000333371 CYP19A1P11511 503 aaPredicted RBP14.24□□□□□ -0.13
VPS33B-201ENST00000333371 TRDNQ13061 729 aa14.24□□□□□ -0.13
VPS33B-201ENST00000333371 GNL2Q13823 731 aaKnown RBP14.24□□□□□ -0.13
VPS33B-201ENST00000333371 LRRFIP1Q32MZ4 808 aaKnown RBP14.24□□□□□ -0.13
VPS33B-201ENST00000333371 APOA5Q6Q788 366 aa14.24□□□□□ -0.13
VPS33B-201ENST00000333371 NUTM2AQ8IVF1 878 aaPredicted RBP14.24□□□□□ -0.13
VPS33B-201ENST00000333371 ZBTB38Q8NAP3 1195 aaPredicted RBP14.24□□□□□ -0.13
VPS33B-201ENST00000333371 ZMYM6O95789 1325 aa14.24□□□□□ -0.13
VPS33B-201ENST00000333371 PHLPP1O60346 1717 aa14.24□□□□□ -0.13
VPS33B-201ENST00000333371 TMEM232C9JQI7 657 aa14.24□□□□□ -0.13
VPS33B-201ENST00000333371 SH2B2O14492 632 aaPredicted RBP14.24□□□□□ -0.13
VPS33B-201ENST00000333371 CSF1RP07333 972 aa14.24□□□□□ -0.13
VPS33B-201ENST00000333371 CTDSPL2Q05D32 466 aa14.24□□□□□ -0.13
VPS33B-201ENST00000333371 CCDC82Q8N4S0 544 aa14.24□□□□□ -0.13
VPS33B-201ENST00000333371 TTLL11Q8NHH1 800 aa14.24□□□□□ -0.13
VPS33B-201ENST00000333371 CDCA7Q9BWT1 371 aaPredicted RBP14.24□□□□□ -0.13
VPS33B-201ENST00000333371 OGFRQ9NZT2 677 aa14.24□□□□□ -0.13
VPS33B-201ENST00000333371 DDX41Q9UJV9 622 aaKnown RBP14.24□□□□□ -0.13
VPS33B-201ENST00000333371 TACC3Q9Y6A5 838 aa14.24□□□□□ -0.13
VPS33B-201ENST00000333371 PTPAQ15257 358 aa14.23□□□□□ -0.13
VPS33B-201ENST00000333371 DDB1Q16531 1140 aa14.23□□□□□ -0.13
VPS33B-201ENST00000333371 UTP14CQ5TAP6 766 aaKnown RBP14.23□□□□□ -0.13
VPS33B-201ENST00000333371 FOXP4Q8IVH2 680 aaPredicted RBP14.23□□□□□ -0.13
VPS33B-201ENST00000333371 CMTR1Q8N1G2 835 aaKnown RBP14.23□□□□□ -0.13
VPS33B-201ENST00000333371 FEZ1Q99689 392 aa14.23□□□□□ -0.13
VPS33B-201ENST00000333371 ZBTB1Q9Y2K1 713 aa14.23□□□□□ -0.13
VPS33B-201ENST00000333371 DOT1LQ8TEK3 1739 aa14.23□□□□□ -0.13
VPS33B-201ENST00000333371 LONRF3Q496Y0 759 aa14.23□□□□□ -0.13
VPS33B-201ENST00000333371 NFXL1Q6ZNB6 911 aa14.23□□□□□ -0.13
VPS33B-201ENST00000333371 SLC4A9Q96Q91 983 aa14.23□□□□□ -0.13
VPS33B-201ENST00000333371 BPIFA3Q9BQP9 254 aa14.23□□□□□ -0.13
VPS33B-201ENST00000333371 IMPACTQ9P2X3 320 aa14.23□□□□□ -0.13
VPS33B-201ENST00000333371 GRIN1Q05586 938 aa14.22□□□□□ -0.13
VPS33B-201ENST00000333371 ERCC6LQ2NKX8 1250 aa14.22□□□□□ -0.13
VPS33B-201ENST00000333371 ZKSCAN3Q9BRR0 538 aa14.22□□□□□ -0.13
VPS33B-201ENST00000333371 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.22□□□□□ -0.131e-6■■■■■ 32.4
VPS33B-201ENST00000333371 FAM217BQ9NTX9 383 aaPredicted RBP14.22□□□□□ -0.13
VPS33B-201ENST00000333371 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.22□□□□□ -0.13
VPS33B-201ENST00000333371 GUCY1A2P33402 732 aa14.22□□□□□ -0.13
VPS33B-201ENST00000333371 METTL16Q86W50 562 aaKnown RBP14.22□□□□□ -0.13
VPS33B-201ENST00000333371 CHMP4CQ96CF2 233 aa14.22□□□□□ -0.13
VPS33B-201ENST00000333371 MAP3K14Q99558 947 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms