RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 NUP62CLQ9H1M0 184 aa10.54□□□□□ -0.72
COPB2-201ENST00000333188 ANGEL1Q9UNK9 670 aaKnown RBP10.54□□□□□ -0.72
COPB2-201ENST00000333188 ST5P78524 1137 aa10.53□□□□□ -0.72
COPB2-201ENST00000333188 CCDC73Q6ZRK6 1079 aa10.53□□□□□ -0.72
COPB2-201ENST00000333188 VGLL2Q8N8G2 317 aa10.53□□□□□ -0.72
COPB2-201ENST00000333188 SLC44A5Q8NCS7 719 aa10.53□□□□□ -0.72
COPB2-201ENST00000333188 EPB41L4AQ9HCS5 686 aaPredicted RBP10.53□□□□□ -0.72
COPB2-201ENST00000333188 PATL2C9JE40 543 aaKnown RBP10.53□□□□□ -0.72
COPB2-201ENST00000333188 USP17L8P0C7I0 530 aa10.53□□□□□ -0.72
COPB2-201ENST00000333188 GTF2IP78347 998 aa10.53□□□□□ -0.72
COPB2-201ENST00000333188 MECOMQ03112 1051 aa10.53□□□□□ -0.72
COPB2-201ENST00000333188 ZSCAN29Q8IWY8 852 aaPredicted RBP10.53□□□□□ -0.72
COPB2-201ENST00000333188 CPVLQ9H3G5 476 aa10.53□□□□□ -0.72
COPB2-201ENST00000333188 NR1I2O75469 434 aa10.52□□□□□ -0.72
COPB2-201ENST00000333188 ANTXR2P58335 489 aa10.52□□□□□ -0.72
COPB2-201ENST00000333188 HOMER1Q86YM7 354 aa10.52□□□□□ -0.72
COPB2-201ENST00000333188 CCAR1Q8IX12 1150 aaKnown RBP10.52□□□□□ -0.72
COPB2-201ENST00000333188 FSIP1Q8NA03 581 aa10.52□□□□□ -0.72
COPB2-201ENST00000333188 RRAGDQ9NQL2 400 aaPredicted RBP10.52□□□□□ -0.72
COPB2-201ENST00000333188 CACNA1FO60840 1977 aa10.52□□□□□ -0.72
COPB2-201ENST00000333188 GSG1L2A8MUP6 293 aa10.52□□□□□ -0.73
COPB2-201ENST00000333188 CTDNEP1O95476 244 aa10.52□□□□□ -0.73
COPB2-201ENST00000333188 SLURP2P0DP57 97 aa10.52□□□□□ -0.73
COPB2-201ENST00000333188 TXNRD1Q16881 649 aa10.52□□□□□ -0.73
COPB2-201ENST00000333188 SASS6Q6UVJ0 657 aa10.52□□□□□ -0.73
COPB2-201ENST00000333188 LEO1Q8WVC0 666 aaPredicted RBP10.52□□□□□ -0.73
COPB2-201ENST00000333188 BSDC1Q9NW68 430 aaPredicted RBP10.52□□□□□ -0.73
COPB2-201ENST00000333188 COL18A1P39060 1754 aa10.52□□□□□ -0.73
COPB2-201ENST00000333188 LDHBP07195 334 aaKnown RBP10.52□□□□□ -0.73
COPB2-201ENST00000333188 CDC27P30260 824 aa10.52□□□□□ -0.73
COPB2-201ENST00000333188 PPARAQ07869 468 aa10.52□□□□□ -0.73
COPB2-201ENST00000333188 LRSAM1Q6UWE0 723 aa10.52□□□□□ -0.73
COPB2-201ENST00000333188 FOXP2O15409 715 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 KINO60870 393 aaKnown RBP10.51□□□□□ -0.73
COPB2-201ENST00000333188 CACNB3P54284 484 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 TCP10Q12799 353 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 UBE3CQ15386 1083 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 GRIK5Q16478 980 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 AKNAD1Q5T1N1 836 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 CCDC183Q5T5S1 534 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 CLEC4GQ6UXB4 293 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 LUZP1Q86V48 1076 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 SCAF8Q9UPN6 1271 aaKnown RBP10.51□□□□□ -0.73
COPB2-201ENST00000333188 SCN11AQ9UI33 1791 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 BECN2A8MW95 431 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 PFKFB2O60825 505 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 IFIT1BQ5T764 474 aaKnown RBP10.51□□□□□ -0.73
COPB2-201ENST00000333188 PRR5LQ6MZQ0 368 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 FNBP4Q8N3X1 1017 aaPredicted RBP10.51□□□□□ -0.73
COPB2-201ENST00000333188 RASSF8Q8NHQ8 419 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 MPHOSPH10O00566 681 aaKnown RBP10.51□□□□□ -0.73
COPB2-201ENST00000333188 MMP10P09238 476 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 GOLGA8HP0CJ92 632 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 HMGN5P82970 282 aaKnown RBP10.51□□□□□ -0.73
COPB2-201ENST00000333188 MFSD14BQ5SR56 506 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 TRIM22Q8IYM9 498 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 SCAND2PQ9GZW5 306 aaPredicted RBP10.51□□□□□ -0.73
COPB2-201ENST00000333188 DNAJC25Q9H1X3 360 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 DBNDD1Q9H9R9 158 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 CLIC4Q9Y696 253 aa10.51□□□□□ -0.73
COPB2-201ENST00000333188 V9GY48 417 aaPredicted RBP10.51□□□□□ -0.73
COPB2-201ENST00000333188 GUCY1A2P33402 732 aa10.5□□□□□ -0.73
COPB2-201ENST00000333188 RTN1Q16799 776 aa10.5□□□□□ -0.73
COPB2-201ENST00000333188 C17orf53Q8N3J3 647 aaPredicted RBP10.5□□□□□ -0.73
COPB2-201ENST00000333188 VPS54Q9P1Q0 977 aa10.5□□□□□ -0.73
COPB2-201ENST00000333188 CFAP45Q9UL16 551 aa10.5□□□□□ -0.73
COPB2-201ENST00000333188 RIC1Q4ADV7 1423 aa10.5□□□□□ -0.73
COPB2-201ENST00000333188 FSD2A1L4K1 749 aa10.5□□□□□ -0.73
COPB2-201ENST00000333188 FGFR2P21802 821 aa10.5□□□□□ -0.73
COPB2-201ENST00000333188 EN1Q05925 392 aaPredicted RBP10.5□□□□□ -0.73
COPB2-201ENST00000333188 SSRP1Q08945 709 aaKnown RBP10.5□□□□□ -0.73
COPB2-201ENST00000333188 SAFBQ15424 915 aaKnown RBP eCLIP10.5□□□□□ -0.73
COPB2-201ENST00000333188 MAP3K11Q16584 847 aa10.5□□□□□ -0.73
COPB2-201ENST00000333188 APOA5Q6Q788 366 aa10.5□□□□□ -0.73
COPB2-201ENST00000333188 IQCA1Q86XH1 822 aa10.5□□□□□ -0.73
COPB2-201ENST00000333188 ZC3H12CQ9C0D7 883 aaKnown RBP10.5□□□□□ -0.73
COPB2-201ENST00000333188 FBXO3Q9UK99 471 aa10.5□□□□□ -0.73
COPB2-201ENST00000333188 EXOSC10Q01780 885 aaKnown RBP10.49□□□□□ -0.73
COPB2-201ENST00000333188 TNKSO95271 1327 aa10.49□□□□□ -0.73
COPB2-201ENST00000333188 XIRP1Q702N8 1843 aaKnown RBP10.49□□□□□ -0.73
COPB2-201ENST00000333188 BTBD18B2RXH4 712 aa10.49□□□□□ -0.73
COPB2-201ENST00000333188 GPSM2P81274 684 aa10.49□□□□□ -0.73
COPB2-201ENST00000333188 UBE4AQ14139 1066 aa10.49□□□□□ -0.73
COPB2-201ENST00000333188 PTPN21Q16825 1174 aa10.49□□□□□ -0.73
COPB2-201ENST00000333188 KIAA0825Q8IV33 1275 aa10.49□□□□□ -0.73
COPB2-201ENST00000333188 ESR2Q92731 530 aa10.49□□□□□ -0.73
COPB2-201ENST00000333188 CLIC6Q96NY7 704 aa10.49□□□□□ -0.73
COPB2-201ENST00000333188 CRNKL1Q9BZJ0 848 aaKnown RBP10.49□□□□□ -0.73
COPB2-201ENST00000333188 TRIM5Q9C035 493 aa10.49□□□□□ -0.73
COPB2-201ENST00000333188 GGA1Q9UJY5 639 aa10.49□□□□□ -0.73
COPB2-201ENST00000333188 FAM196BA6NMK8 535 aa10.49□□□□□ -0.73
COPB2-201ENST00000333188 ARID4AP29374 1257 aaPredicted RBP10.49□□□□□ -0.73
COPB2-201ENST00000333188 NR5A1Q13285 461 aa10.49□□□□□ -0.73
COPB2-201ENST00000333188 ANO6Q4KMQ2 910 aa10.49□□□□□ -0.73
COPB2-201ENST00000333188 MB21D2Q8IYB1 491 aaPredicted RBP10.49□□□□□ -0.73
COPB2-201ENST00000333188 TTC12Q9H892 705 aaPredicted RBP10.49□□□□□ -0.73
COPB2-201ENST00000333188 BCL9LQ86UU0 1499 aa10.49□□□□□ -0.73
COPB2-201ENST00000333188 DISP2A7MBM2 1401 aa10.49□□□□□ -0.73
COPB2-201ENST00000333188 ESPNB1AK53 854 aa10.48□□□□□ -0.73
COPB2-201ENST00000333188 FDPSP14324 419 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms