RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 ADGRA1Q86SQ6 560 aa16■□□□□ 0.15
SRPRA-201ENST00000332118 APOA5Q6Q788 366 aa16■□□□□ 0.15
SRPRA-201ENST00000332118 NBPF5PQ86XG9 351 aaPredicted RBP16■□□□□ 0.15
SRPRA-201ENST00000332118 PGBD1Q96JS3 809 aa16■□□□□ 0.15
SRPRA-201ENST00000332118 NACAP1Q9BZK3 213 aa16■□□□□ 0.15
SRPRA-201ENST00000332118 GPHNQ9NQX3 736 aaPredicted RBP16■□□□□ 0.15
SRPRA-201ENST00000332118 FAM177BA6PVY3 158 aa16■□□□□ 0.15
SRPRA-201ENST00000332118 SEPT12Q8IYM1 358 aa16■□□□□ 0.15
SRPRA-201ENST00000332118 FBXO18Q8NFZ0 1043 aa16■□□□□ 0.15
SRPRA-201ENST00000332118 SPATA32Q96LK8 384 aa16■□□□□ 0.15
SRPRA-201ENST00000332118 RRAGDQ9NQL2 400 aaPredicted RBP16■□□□□ 0.15
SRPRA-201ENST00000332118 LRRC4BQ9NT99 713 aa16■□□□□ 0.15
SRPRA-201ENST00000332118 DDX19AQ9NUU7 478 aaKnown RBP16■□□□□ 0.15
SRPRA-201ENST00000332118 TNS1Q9HBL0 1735 aaKnown RBP15.99■□□□□ 0.15
SRPRA-201ENST00000332118 BRAPQ7Z569 592 aa15.99■□□□□ 0.15
SRPRA-201ENST00000332118 ARMT1Q9H993 441 aa15.99■□□□□ 0.15
SRPRA-201ENST00000332118 NCOA5Q9HCD5 579 aaKnown RBP15.99■□□□□ 0.15
SRPRA-201ENST00000332118 FAM217BQ9NTX9 383 aaPredicted RBP15.99■□□□□ 0.15
SRPRA-201ENST00000332118 NAV1Q8NEY1 1877 aa15.99■□□□□ 0.15
SRPRA-201ENST00000332118 TRAPPC3LQ5T215 181 aa15.99■□□□□ 0.15
SRPRA-201ENST00000332118 CHST3Q7LGC8 479 aa15.99■□□□□ 0.15
SRPRA-201ENST00000332118 NAPBQ9H115 298 aa15.99■□□□□ 0.15
SRPRA-201ENST00000332118 RTEL1Q9NZ71 1219 aa15.99■□□□□ 0.15
SRPRA-201ENST00000332118 GOLGA8BA8MQT2 603 aa15.98■□□□□ 0.15
SRPRA-201ENST00000332118 H3BQV1 296 aa15.98■□□□□ 0.15
SRPRA-201ENST00000332118 CDKL5O76039 1030 aa15.98■□□□□ 0.15
SRPRA-201ENST00000332118 HSPA1LP34931 641 aa15.98■□□□□ 0.15
SRPRA-201ENST00000332118 GRAPQ13588 217 aa15.98■□□□□ 0.15
SRPRA-201ENST00000332118 IFFO2Q5TF58 517 aa15.98■□□□□ 0.15
SRPRA-201ENST00000332118 GRAPLQ8TC17 118 aaPredicted RBP15.98■□□□□ 0.15
SRPRA-201ENST00000332118 RNF41Q9H4P4 317 aaPredicted RBP15.98■□□□□ 0.15
SRPRA-201ENST00000332118 MORC2Q9Y6X9 1032 aaPredicted RBP15.98■□□□□ 0.15
SRPRA-201ENST00000332118 GYG1P46976 350 aa15.98■□□□□ 0.15
SRPRA-201ENST00000332118 KCNQ4P56696 695 aa15.98■□□□□ 0.15
SRPRA-201ENST00000332118 CCT2P78371 535 aaKnown RBP15.98■□□□□ 0.15
SRPRA-201ENST00000332118 NSUN4Q96CB9 384 aaKnown RBP15.98■□□□□ 0.15
SRPRA-201ENST00000332118 LEMD3Q9Y2U8 911 aa15.98■□□□□ 0.15
SRPRA-201ENST00000332118 FERMT3Q86UX7 667 aa15.98■□□□□ 0.15
SRPRA-201ENST00000332118 CLSTN2Q9H4D0 955 aa15.98■□□□□ 0.15
SRPRA-201ENST00000332118 POLR3EQ9NVU0 708 aa15.98■□□□□ 0.15
SRPRA-201ENST00000332118 ZSWIM5Q9P217 1185 aa15.98■□□□□ 0.15
SRPRA-201ENST00000332118 ROBO3Q96MS0 1386 aa15.98■□□□□ 0.15
SRPRA-201ENST00000332118 ZNF646O15015 1829 aaPredicted RBP15.97■□□□□ 0.15
SRPRA-201ENST00000332118 NFIXQ14938 502 aa15.97■□□□□ 0.15
SRPRA-201ENST00000332118 PPP2R5BQ15173 497 aa15.97■□□□□ 0.15
SRPRA-201ENST00000332118 ZNF396Q96N95 335 aaPredicted RBP15.97■□□□□ 0.15
SRPRA-201ENST00000332118 BAZ2AQ9UIF9 1905 aaKnown RBP15.97■□□□□ 0.15
SRPRA-201ENST00000332118 TMTC2Q8N394 836 aa15.97■□□□□ 0.15
SRPRA-201ENST00000332118 DDX11Q96FC9 970 aa15.97■□□□□ 0.15
SRPRA-201ENST00000332118 SLC4A4Q9Y6R1 1079 aa15.97■□□□□ 0.15
SRPRA-201ENST00000332118 MAGEB6P1A0A0J9YX57 407 aa15.96■□□□□ 0.15
SRPRA-201ENST00000332118 A0A1W2PQ27 194 aa15.96■□□□□ 0.15
SRPRA-201ENST00000332118 A0A1W2PQ64 194 aa15.96■□□□□ 0.15
SRPRA-201ENST00000332118 A0A1W2PQD8 194 aa15.96■□□□□ 0.15
SRPRA-201ENST00000332118 B4E1Z4 1266 aa15.96■□□□□ 0.15
SRPRA-201ENST00000332118 YEATS4O95619 227 aa15.96■□□□□ 0.15
SRPRA-201ENST00000332118 CLCN1P35523 988 aa15.96■□□□□ 0.15
SRPRA-201ENST00000332118 PPARAQ07869 468 aa15.96■□□□□ 0.15
SRPRA-201ENST00000332118 SEC23AQ15436 765 aa15.96■□□□□ 0.15
SRPRA-201ENST00000332118 FOXD4L6Q3SYB3 417 aaPredicted RBP15.96■□□□□ 0.15
SRPRA-201ENST00000332118 SBK1Q52WX2 424 aa15.96■□□□□ 0.15
SRPRA-201ENST00000332118 FAM173BQ6P4H8 233 aa15.96■□□□□ 0.15
SRPRA-201ENST00000332118 FOXD4L3Q6VB84 417 aaPredicted RBP15.96■□□□□ 0.15
SRPRA-201ENST00000332118 FAM196AQ6ZSG2 479 aa15.96■□□□□ 0.15
SRPRA-201ENST00000332118 LRP2BPQ9P2M1 347 aa15.96■□□□□ 0.15
SRPRA-201ENST00000332118 A0A0G2JS52 829 aa15.96■□□□□ 0.14
SRPRA-201ENST00000332118 LIG1P18858 919 aa15.96■□□□□ 0.14
SRPRA-201ENST00000332118 HOXA10P31260 410 aaPredicted RBP15.96■□□□□ 0.14
SRPRA-201ENST00000332118 MFSD6Q6ZSS7 791 aa15.96■□□□□ 0.14
SRPRA-201ENST00000332118 ENGASEQ8NFI3 743 aa15.95■□□□□ 0.14
SRPRA-201ENST00000332118 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.95■□□□□ 0.14
SRPRA-201ENST00000332118 PRKAB2O43741 272 aa15.95■□□□□ 0.14
SRPRA-201ENST00000332118 DTNBO60941 627 aa15.95■□□□□ 0.14
SRPRA-201ENST00000332118 GYS1P13807 737 aa15.95■□□□□ 0.14
SRPRA-201ENST00000332118 IFNAR1P17181 557 aa15.95■□□□□ 0.14
SRPRA-201ENST00000332118 CYP7A1P22680 504 aa15.95■□□□□ 0.14
SRPRA-201ENST00000332118 HIBADHP31937 336 aaKnown RBP15.95■□□□□ 0.14
SRPRA-201ENST00000332118 RFC4P35249 363 aa15.95■□□□□ 0.14
SRPRA-201ENST00000332118 METAP2P50579 478 aaKnown RBP eCLIP15.95■□□□□ 0.143e-9■□□□□ 10.3
SRPRA-201ENST00000332118 ANP32BQ92688 251 aaKnown RBP15.95■□□□□ 0.14
SRPRA-201ENST00000332118 PODXL2Q9NZ53 605 aa15.95■□□□□ 0.14
SRPRA-201ENST00000332118 WTIPA6NIX2 430 aaPredicted RBP15.94■□□□□ 0.14
SRPRA-201ENST00000332118 FMNL1O95466 1100 aaPredicted RBP15.94■□□□□ 0.14
SRPRA-201ENST00000332118 U2AF2P26368 475 aaKnown RBP eCLIP15.94■□□□□ 0.144e-17■■□□□ 12.9
SRPRA-201ENST00000332118 CDC27P30260 824 aa15.94■□□□□ 0.14
SRPRA-201ENST00000332118 KIF23Q02241 960 aaPredicted RBP15.94■□□□□ 0.14
SRPRA-201ENST00000332118 NBPF11Q86T75 865 aa15.94■□□□□ 0.14
SRPRA-201ENST00000332118 FAM237AA0A1B0GTK4 181 aa15.94■□□□□ 0.14
SRPRA-201ENST00000332118 ORC4O43929 436 aa15.94■□□□□ 0.14
SRPRA-201ENST00000332118 TDRD7Q8NHU6 1098 aaKnown RBP15.94■□□□□ 0.14
SRPRA-201ENST00000332118 MKRN1Q9UHC7 482 aaKnown RBP15.94■□□□□ 0.14
SRPRA-201ENST00000332118 COL11A2P13942 1736 aaPredicted RBP15.94■□□□□ 0.14
SRPRA-201ENST00000332118 ZBTB43O43298 467 aa15.93■□□□□ 0.14
SRPRA-201ENST00000332118 CAVIN2O95810 425 aa15.93■□□□□ 0.14
SRPRA-201ENST00000332118 KLRK1P26718 216 aa15.93■□□□□ 0.14
SRPRA-201ENST00000332118 SNW1Q13573 536 aaKnown RBP15.93■□□□□ 0.14
SRPRA-201ENST00000332118 PRR5LQ6MZQ0 368 aa15.93■□□□□ 0.14
SRPRA-201ENST00000332118 USP28Q96RU2 1077 aa15.93■□□□□ 0.14
SRPRA-201ENST00000332118 ORC3Q9UBD5 711 aaPredicted RBP15.93■□□□□ 0.14
SRPRA-201ENST00000332118 XDHP47989 1333 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms