RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 REXO1L1PQ8IX06 675 aa16.79■□□□□ 0.28
SSBP3-201ENST00000326956 XAGE2Q96GT9 111 aa16.79■□□□□ 0.28
SSBP3-201ENST00000326956 CLIC6Q96NY7 704 aa16.79■□□□□ 0.28
SSBP3-201ENST00000326956 TMEM232C9JQI7 657 aa16.79■□□□□ 0.28
SSBP3-201ENST00000326956 RXRAP19793 462 aa16.79■□□□□ 0.28
SSBP3-201ENST00000326956 CCDC191Q8NCU4 936 aa16.79■□□□□ 0.28
SSBP3-201ENST00000326956 ZMYM6O95789 1325 aa16.79■□□□□ 0.28
SSBP3-201ENST00000326956 FER1L4A9Z1Z3 1794 aa16.78■□□□□ 0.28
SSBP3-201ENST00000326956 CUTAO60888 179 aa16.78■□□□□ 0.28
SSBP3-201ENST00000326956 CYP2C19P33261 490 aa16.78■□□□□ 0.28
SSBP3-201ENST00000326956 GPS2Q13227 327 aa16.78■□□□□ 0.28
SSBP3-201ENST00000326956 MICU3Q86XE3 530 aa16.78■□□□□ 0.28
SSBP3-201ENST00000326956 PUS7LQ9H0K6 701 aaKnown RBP16.78■□□□□ 0.28
SSBP3-201ENST00000326956 TMX1Q9H3N1 280 aa16.78■□□□□ 0.28
SSBP3-201ENST00000326956 ATG3Q9NT62 314 aa16.78■□□□□ 0.28
SSBP3-201ENST00000326956 KCNH3Q9ULD8 1083 aa16.78■□□□□ 0.28
SSBP3-201ENST00000326956 SLIT3O75094 1523 aa16.78■□□□□ 0.28
SSBP3-201ENST00000326956 SEC31AO94979 1220 aaKnown RBP16.78■□□□□ 0.28
SSBP3-201ENST00000326956 ADORA1P30542 326 aa16.78■□□□□ 0.28
SSBP3-201ENST00000326956 IARSP41252 1262 aaKnown RBP16.78■□□□□ 0.28
SSBP3-201ENST00000326956 HSD3B7Q9H2F3 369 aa16.78■□□□□ 0.28
SSBP3-201ENST00000326956 HPSEQ9Y251 543 aa16.78■□□□□ 0.28
SSBP3-201ENST00000326956 PCDHA5Q9Y5H7 936 aa16.78■□□□□ 0.28
SSBP3-201ENST00000326956 PARP3Q9Y6F1 533 aa16.78■□□□□ 0.28
SSBP3-201ENST00000326956 LMTK3Q96Q04 1460 aa16.77■□□□□ 0.28
SSBP3-201ENST00000326956 ATP8B1O43520 1251 aa16.77■□□□□ 0.28
SSBP3-201ENST00000326956 ZRANB2O95218 330 aaKnown RBP eCLIP16.77■□□□□ 0.28
SSBP3-201ENST00000326956 ZAP70P43403 619 aa16.77■□□□□ 0.28
SSBP3-201ENST00000326956 KRBA2Q6ZNG9 492 aa16.77■□□□□ 0.28
SSBP3-201ENST00000326956 PHKBQ93100 1093 aa16.77■□□□□ 0.28
SSBP3-201ENST00000326956 DACH1Q9UI36 760 aa16.77■□□□□ 0.28
SSBP3-201ENST00000326956 CYP27B1O15528 508 aa16.77■□□□□ 0.27
SSBP3-201ENST00000326956 RESP18Q5W5W9 173 aa16.77■□□□□ 0.27
SSBP3-201ENST00000326956 CCDC85AQ96PX6 553 aaPredicted RBP16.77■□□□□ 0.27
SSBP3-201ENST00000326956 C19orf44Q9H6X5 657 aa16.77■□□□□ 0.27
SSBP3-201ENST00000326956 WDR19Q8NEZ3 1342 aa16.77■□□□□ 0.27
SSBP3-201ENST00000326956 PPP2R3AQ06190 1150 aa16.76■□□□□ 0.27
SSBP3-201ENST00000326956 LONRF3Q496Y0 759 aa16.76■□□□□ 0.27
SSBP3-201ENST00000326956 GPR161Q8N6U8 529 aaKnown RBP16.76■□□□□ 0.27
SSBP3-201ENST00000326956 ARFGAP3Q9NP61 516 aa16.76■□□□□ 0.27
SSBP3-201ENST00000326956 ZNF330Q9Y3S2 320 aaPredicted RBP16.76■□□□□ 0.27
SSBP3-201ENST00000326956 VWA3AA6NCI4 1184 aa16.76■□□□□ 0.27
SSBP3-201ENST00000326956 SAFBQ15424 915 aaKnown RBP eCLIP16.76■□□□□ 0.27
SSBP3-201ENST00000326956 NBPF26B4DH59 902 aa16.76■□□□□ 0.27
SSBP3-201ENST00000326956 ZBTB43O43298 467 aa16.76■□□□□ 0.27
SSBP3-201ENST00000326956 NBPF14Q5TI25 921 aa16.76■□□□□ 0.27
SSBP3-201ENST00000326956 NBPF10Q6P3W6 841 aaKnown RBP16.76■□□□□ 0.27
SSBP3-201ENST00000326956 METTL16Q86W50 562 aaKnown RBP16.76■□□□□ 0.27
SSBP3-201ENST00000326956 NBPF15Q8N660 670 aa16.76■□□□□ 0.27
SSBP3-201ENST00000326956 GOLGA8AA7E2F4 631 aa16.75■□□□□ 0.27
SSBP3-201ENST00000326956 STX10O60499 249 aa16.75■□□□□ 0.27
SSBP3-201ENST00000326956 KRI1Q8N9T8 703 aaKnown RBP16.75■□□□□ 0.27
SSBP3-201ENST00000326956 CPDO75976 1380 aa16.75■□□□□ 0.27
SSBP3-201ENST00000326956 SCN11AQ9UI33 1791 aa16.75■□□□□ 0.27
SSBP3-201ENST00000326956 FOXP2O15409 715 aa16.75■□□□□ 0.27
SSBP3-201ENST00000326956 A1BGP04217 495 aa16.75■□□□□ 0.27
SSBP3-201ENST00000326956 PTPAQ15257 358 aa16.75■□□□□ 0.27
SSBP3-201ENST00000326956 SPECC1LQ69YQ0 1117 aa16.75■□□□□ 0.27
SSBP3-201ENST00000326956 RGS22Q8NE09 1264 aa16.75■□□□□ 0.27
SSBP3-201ENST00000326956 ARFGEF2Q9Y6D5 1785 aa16.75■□□□□ 0.27
SSBP3-201ENST00000326956 ADKP55263 362 aaKnown RBP16.74■□□□□ 0.27
SSBP3-201ENST00000326956 SCARF1Q14162 830 aa16.74■□□□□ 0.27
SSBP3-201ENST00000326956 APOA5Q6Q788 366 aa16.74■□□□□ 0.27
SSBP3-201ENST00000326956 TXLNBQ8N3L3 684 aa16.74■□□□□ 0.27
SSBP3-201ENST00000326956 EPC1Q9H2F5 836 aa16.74■□□□□ 0.27
SSBP3-201ENST00000326956 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.74■□□□□ 0.27
SSBP3-201ENST00000326956 NFE2L3Q9Y4A8 694 aa16.74■□□□□ 0.27
SSBP3-201ENST00000326956 ADAMTS7Q9UKP4 1686 aa16.74■□□□□ 0.27
SSBP3-201ENST00000326956 SPECC1Q5M775 1068 aa16.74■□□□□ 0.27
SSBP3-201ENST00000326956 CCDC12Q8WUD4 166 aaPredicted RBP16.74■□□□□ 0.27
SSBP3-201ENST00000326956 OAS2P29728 719 aaKnown RBP16.73■□□□□ 0.27
SSBP3-201ENST00000326956 HNRNPH2P55795 449 aaKnown RBP16.73■□□□□ 0.27
SSBP3-201ENST00000326956 SSRP1Q08945 709 aaKnown RBP16.73■□□□□ 0.27
SSBP3-201ENST00000326956 SLC9C2Q5TAH2 1124 aa16.73■□□□□ 0.27
SSBP3-201ENST00000326956 CC2D1AQ6P1N0 951 aaPredicted RBP16.73■□□□□ 0.27
SSBP3-201ENST00000326956 PI16Q6UXB8 463 aa16.73■□□□□ 0.27
SSBP3-201ENST00000326956 BBXQ8WY36 941 aaPredicted RBP16.73■□□□□ 0.27
SSBP3-201ENST00000326956 GOLGA1Q92805 767 aa16.73■□□□□ 0.27
SSBP3-201ENST00000326956 SMARCE1Q969G3 411 aa16.73■□□□□ 0.27
SSBP3-201ENST00000326956 CCDC34Q96HJ3 373 aa16.73■□□□□ 0.27
SSBP3-201ENST00000326956 WDR24Q96S15 920 aa16.73■□□□□ 0.27
SSBP3-201ENST00000326956 SLC26A6Q9BXS9 759 aa16.73■□□□□ 0.27
SSBP3-201ENST00000326956 MEGF6O75095 1541 aa16.73■□□□□ 0.27
SSBP3-201ENST00000326956 B4E1Z4 1266 aa16.73■□□□□ 0.27
SSBP3-201ENST00000326956 KARSQ15046 597 aaKnown RBP16.73■□□□□ 0.27
SSBP3-201ENST00000326956 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.73■□□□□ 0.27
SSBP3-201ENST00000326956 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.73■□□□□ 0.27
SSBP3-201ENST00000326956 SH2B2O14492 632 aaPredicted RBP16.73■□□□□ 0.27
SSBP3-201ENST00000326956 ZBTB22O15209 634 aa16.73■□□□□ 0.27
SSBP3-201ENST00000326956 IDH1O75874 414 aaKnown RBP16.73■□□□□ 0.27
SSBP3-201ENST00000326956 MAP3K9P80192 1104 aa16.73■□□□□ 0.27
SSBP3-201ENST00000326956 IFIT5Q13325 482 aaKnown RBP16.73■□□□□ 0.27
SSBP3-201ENST00000326956 SMC1AQ14683 1233 aaKnown RBP16.73■□□□□ 0.27
SSBP3-201ENST00000326956 TMEM67Q5HYA8 995 aa16.73■□□□□ 0.27
SSBP3-201ENST00000326956 TMEM87BQ96K49 555 aa16.73■□□□□ 0.27
SSBP3-201ENST00000326956 MAP3K14Q99558 947 aa16.73■□□□□ 0.27
SSBP3-201ENST00000326956 SPEF2Q9C093 1822 aa16.72■□□□□ 0.27
SSBP3-201ENST00000326956 FAM237AA0A1B0GTK4 181 aa16.72■□□□□ 0.27
SSBP3-201ENST00000326956 CDC27P30260 824 aa16.72■□□□□ 0.27
SSBP3-201ENST00000326956 PDE4BQ07343 736 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms