RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 RLBP1P12271 317 aa21.31■■□□□ 1
UBE2N-201ENST00000318066 DDX21Q9NR30 783 aaKnown RBP eCLIP21.31■■□□□ 1
UBE2N-201ENST00000318066 NPATQ14207 1427 aa21.31■■□□□ 1
UBE2N-201ENST00000318066 MCM7P33993 719 aa21.31■■□□□ 1
UBE2N-201ENST00000318066 ZNF75DP51815 510 aa21.31■■□□□ 1
UBE2N-201ENST00000318066 TMEM87AQ8NBN3 555 aa21.31■■□□□ 1
UBE2N-201ENST00000318066 DMRT2Q9Y5R5 561 aa21.31■■□□□ 1
UBE2N-201ENST00000318066 OGFOD1Q8N543 542 aa21.31■■□□□ 1
UBE2N-201ENST00000318066 STMN2Q93045 179 aa21.31■■□□□ 1
UBE2N-201ENST00000318066 FAM169AQ9Y6X4 670 aa21.31■■□□□ 1
UBE2N-201ENST00000318066 UHRF1BP1Q6BDS2 1440 aa21.31■■□□□ 1
UBE2N-201ENST00000318066 MTHFSDQ2M296 383 aaKnown RBP21.3■■□□□ 1
UBE2N-201ENST00000318066 DCAF5Q96JK2 942 aa21.3■■□□□ 1
UBE2N-201ENST00000318066 KCNK9Q9NPC2 374 aa21.3■■□□□ 1
UBE2N-201ENST00000318066 CIB2O75838 187 aa21.3■■□□□ 1
UBE2N-201ENST00000318066 FCHSD1Q86WN1 690 aa21.3■■□□□ 1
UBE2N-201ENST00000318066 CACNA2D3Q8IZS8 1091 aa21.3■■□□□ 1
UBE2N-201ENST00000318066 ERCC6LQ2NKX8 1250 aa21.3■■□□□ 1
UBE2N-201ENST00000318066 DNAJC21Q5F1R6 531 aaKnown RBP21.3■■□□□ 1
UBE2N-201ENST00000318066 HAUS3Q68CZ6 603 aa21.3■■□□□ 1
UBE2N-201ENST00000318066 RGS22Q8NE09 1264 aa21.3■■□□□ 1
UBE2N-201ENST00000318066 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.3■■□□□ 1
UBE2N-201ENST00000318066 RBSNQ9H1K0 784 aa21.3■■□□□ 1
UBE2N-201ENST00000318066 MKRN1Q9UHC7 482 aaKnown RBP21.3■■□□□ 1
UBE2N-201ENST00000318066 KIF24Q5T7B8 1368 aa21.3■■□□□ 1
UBE2N-201ENST00000318066 MCM9Q9NXL9 1143 aa21.3■■□□□ 1
UBE2N-201ENST00000318066 PA2G4Q9UQ80 394 aaKnown RBP21.3■■□□□ 1
UBE2N-201ENST00000318066 ATP11AP98196 1134 aa21.29■■□□□ 1
UBE2N-201ENST00000318066 NOX5Q96PH1 765 aa21.29■■□□□ 1
UBE2N-201ENST00000318066 ZRANB1Q9UGI0 708 aa21.29■■□□□ 1
UBE2N-201ENST00000318066 UHRF1BP1LA0JNW5 1464 aa21.29■■□□□ 1
UBE2N-201ENST00000318066 FANCCQ00597 558 aa21.29■■□□□ 1
UBE2N-201ENST00000318066 PPFIA1Q13136 1202 aa21.29■■□□□ 1
UBE2N-201ENST00000318066 FYB2Q5VWT5 728 aa21.29■■□□□ 1
UBE2N-201ENST00000318066 PLCD3Q8N3E9 789 aa21.29■■□□□ 1
UBE2N-201ENST00000318066 CCDC51Q96ER9 411 aa21.29■■□□□ 1
UBE2N-201ENST00000318066 SEC62Q99442 399 aaKnown RBP21.29■■□□□ 1
UBE2N-201ENST00000318066 DENND2AQ9ULE3 1009 aa21.29■■□□□ 1
UBE2N-201ENST00000318066 NDUFAB1O14561 156 aa21.29■■□□□ 1
UBE2N-201ENST00000318066 SH2D4AQ9H788 454 aa21.29■■□□□ 1
UBE2N-201ENST00000318066 ITSN2Q9NZM3 1697 aa21.29■■□□□ 1
UBE2N-201ENST00000318066 A0A1B0GVL5 298 aa21.29■■□□□ 1
UBE2N-201ENST00000318066 MTMR3Q13615 1198 aa21.29■■□□□ 1
UBE2N-201ENST00000318066 UBLCP1Q8WVY7 318 aaPredicted RBP21.29■■□□□ 1
UBE2N-201ENST00000318066 TM6SF1Q9BZW5 370 aa21.29■■□□□ 1
UBE2N-201ENST00000318066 MAPKBP1O60336 1514 aa21.29■■□□□ 1
UBE2N-201ENST00000318066 CCDC160A6NGH7 325 aa21.28■■□□□ 1
UBE2N-201ENST00000318066 TRAF5O00463 557 aa21.28■■□□□ 1
UBE2N-201ENST00000318066 ERCC5P28715 1186 aaPredicted RBP21.28■■□□□ 1
UBE2N-201ENST00000318066 NLRP12P59046 1061 aa21.28■■□□□ 1
UBE2N-201ENST00000318066 TPTE2Q6XPS3 522 aa21.28■■□□□ 1
UBE2N-201ENST00000318066 TFCP2Q12800 502 aa21.28■■□□□ 1
UBE2N-201ENST00000318066 CFAP157Q5JU67 520 aa21.28■■□□□ 1
UBE2N-201ENST00000318066 LMNTD2Q8IXW0 634 aa21.28■■□□□ 1
UBE2N-201ENST00000318066 UBL4BQ8N7F7 174 aa21.28■■□□□ 1
UBE2N-201ENST00000318066 GABPB2Q8TAK5 448 aaPredicted RBP21.28■■□□□ 1
UBE2N-201ENST00000318066 FAM184BQ9ULE4 1060 aa21.28■■□□□ 1
UBE2N-201ENST00000318066 PLCH2O75038 1416 aa21.28■■□□□ 1
UBE2N-201ENST00000318066 NGLY1Q96IV0 654 aa21.28■■□□□ 1
UBE2N-201ENST00000318066 PARP1P09874 1014 aaKnown RBP21.28■■□□□ 1
UBE2N-201ENST00000318066 TAOK1Q7L7X3 1001 aa21.28■■□□□ 1
UBE2N-201ENST00000318066 CCDC84Q86UT8 332 aaPredicted RBP21.28■■□□□ 1
UBE2N-201ENST00000318066 UGGT2Q9NYU1 1516 aa21.28■■□□□ 1
UBE2N-201ENST00000318066 SEPT6Q14141 434 aa21.27■■□□□ 1
UBE2N-201ENST00000318066 ARHGAP24Q8N264 748 aa21.27■■□□□ 1
UBE2N-201ENST00000318066 MAGEB6Q8N7X4 407 aa21.27■■□□□ 1
UBE2N-201ENST00000318066 ANGEL1Q9UNK9 670 aaKnown RBP21.27■■□□□ 1
UBE2N-201ENST00000318066 CETN3O15182 167 aa21.27■■□□□ 1
UBE2N-201ENST00000318066 DKC1O60832 514 aaKnown RBP eCLIP21.27■■□□□ 1
UBE2N-201ENST00000318066 UTP11Q9Y3A2 253 aaKnown RBP21.27■■□□□ 1
UBE2N-201ENST00000318066 PAK2Q13177 524 aa21.27■■□□□ 1
UBE2N-201ENST00000318066 C10orf67Q8IYJ2 551 aa21.27■■□□□ 1
UBE2N-201ENST00000318066 SLC9C1Q4G0N8 1177 aa21.27■■□□□ 1
UBE2N-201ENST00000318066 NIP7Q9Y221 180 aaKnown RBP eCLIP21.27■■□□□ 1
UBE2N-201ENST00000318066 GOLGA6CA6NDK9 693 aa21.26■□□□□ 0.99
UBE2N-201ENST00000318066 GOLGA6DP0CG33 693 aa21.26■□□□□ 0.99
UBE2N-201ENST00000318066 TNFAIP3P21580 790 aa21.26■□□□□ 0.99
UBE2N-201ENST00000318066 JARID2Q92833 1246 aaPredicted RBP21.26■□□□□ 0.99
UBE2N-201ENST00000318066 SECISBP2LQ93073 1101 aaKnown RBP21.26■□□□□ 0.99
UBE2N-201ENST00000318066 GOLGA6AQ9NYA3 693 aa21.26■□□□□ 0.99
UBE2N-201ENST00000318066 SGSM2O43147 1006 aa21.26■□□□□ 0.99
UBE2N-201ENST00000318066 SNX16P57768 344 aa21.26■□□□□ 0.99
UBE2N-201ENST00000318066 PAK1Q13153 545 aa21.26■□□□□ 0.99
UBE2N-201ENST00000318066 WDR44Q5JSH3 913 aa21.26■□□□□ 0.99
UBE2N-201ENST00000318066 APPBP2Q92624 585 aa21.26■□□□□ 0.99
UBE2N-201ENST00000318066 SYNRGQ9UMZ2 1314 aa21.26■□□□□ 0.99
UBE2N-201ENST00000318066 VWA3AA6NCI4 1184 aa21.26■□□□□ 0.99
UBE2N-201ENST00000318066 TMEM110-MUSTN1A8MSY1 372 aa21.26■□□□□ 0.99
UBE2N-201ENST00000318066 IRS4O14654 1257 aaPredicted RBP21.26■□□□□ 0.99
UBE2N-201ENST00000318066 INPP5BP32019 993 aa21.26■□□□□ 0.99
UBE2N-201ENST00000318066 TRMT1LQ7Z2T5 733 aaKnown RBP21.26■□□□□ 0.99
UBE2N-201ENST00000318066 SYCE1Q8N0S2 351 aa21.26■□□□□ 0.99
UBE2N-201ENST00000318066 TESK2Q96S53 571 aa21.26■□□□□ 0.99
UBE2N-201ENST00000318066 EYA2O00167 538 aa21.25■□□□□ 0.99
UBE2N-201ENST00000318066 SLC27A2O14975 620 aa21.25■□□□□ 0.99
UBE2N-201ENST00000318066 CALUO43852 315 aaPredicted RBP21.25■□□□□ 0.99
UBE2N-201ENST00000318066 GMNNO75496 209 aa21.25■□□□□ 0.99
UBE2N-201ENST00000318066 LDHBP07195 334 aaKnown RBP21.25■□□□□ 0.99
UBE2N-201ENST00000318066 PDE4DQ08499 809 aa21.25■□□□□ 0.99
UBE2N-201ENST00000318066 LEO1Q8WVC0 666 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms