RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 SMC3Q9UQE7 1217 aa8.48□□□□□ -1.05
NPHP1-201ENST00000316534 PLIN4Q96Q06 1357 aa8.48□□□□□ -1.05
NPHP1-201ENST00000316534 ZNF213O14771 459 aa8.48□□□□□ -1.05
NPHP1-201ENST00000316534 ORC4O43929 436 aa8.48□□□□□ -1.05
NPHP1-201ENST00000316534 SRGNP10124 158 aa8.48□□□□□ -1.05
NPHP1-201ENST00000316534 HIBADHP31937 336 aaKnown RBP8.48□□□□□ -1.05
NPHP1-201ENST00000316534 GPSM2P81274 684 aa8.48□□□□□ -1.05
NPHP1-201ENST00000316534 HMGN5P82970 282 aaKnown RBP8.48□□□□□ -1.05
NPHP1-201ENST00000316534 TXNRD3Q86VQ6 643 aa8.48□□□□□ -1.05
NPHP1-201ENST00000316534 FOXD4L1Q9NU39 408 aa8.48□□□□□ -1.05
NPHP1-201ENST00000316534 ATP6V0A2Q9Y487 856 aa8.48□□□□□ -1.05
NPHP1-201ENST00000316534 MBD4O95243 580 aa8.47□□□□□ -1.05
NPHP1-201ENST00000316534 RXRBP28702 533 aa8.47□□□□□ -1.05
NPHP1-201ENST00000316534 MBD3O95983 291 aa8.47□□□□□ -1.05
NPHP1-201ENST00000316534 HSP90AA1P07900 732 aaKnown RBP8.47□□□□□ -1.05
NPHP1-201ENST00000316534 AKNAD1Q5T1N1 836 aa8.47□□□□□ -1.05
NPHP1-201ENST00000316534 STYK1Q6J9G0 422 aa8.47□□□□□ -1.05
NPHP1-201ENST00000316534 RBM43Q6ZSC3 357 aaKnown RBP8.47□□□□□ -1.05
NPHP1-201ENST00000316534 ILDR1Q86SU0 546 aaPredicted RBP8.47□□□□□ -1.05
NPHP1-201ENST00000316534 PRC1O43663 620 aa8.47□□□□□ -1.05
NPHP1-201ENST00000316534 KCNJ4P48050 445 aa8.47□□□□□ -1.05
NPHP1-201ENST00000316534 MECOMQ03112 1051 aa8.47□□□□□ -1.05
NPHP1-201ENST00000316534 NECAB1Q8N987 351 aa8.47□□□□□ -1.05
NPHP1-201ENST00000316534 C7orf43Q8WVR3 580 aa8.47□□□□□ -1.05
NPHP1-201ENST00000316534 BRF1Q92994 677 aa8.47□□□□□ -1.05
NPHP1-201ENST00000316534 MRIQ9BWK5 157 aa8.47□□□□□ -1.05
NPHP1-201ENST00000316534 KRT23Q9C075 422 aa8.47□□□□□ -1.05
NPHP1-201ENST00000316534 ZSCAN16Q9H4T2 348 aaPredicted RBP8.47□□□□□ -1.05
NPHP1-201ENST00000316534 ATP8A2Q9NTI2 1148 aa8.47□□□□□ -1.05
NPHP1-201ENST00000316534 WASHC4Q2M389 1173 aa8.46□□□□□ -1.05
NPHP1-201ENST00000316534 NBPF11Q86T75 865 aa8.46□□□□□ -1.05
NPHP1-201ENST00000316534 WDR66Q8TBY9 1149 aa8.46□□□□□ -1.05
NPHP1-201ENST00000316534 ARXQ96QS3 562 aa8.46□□□□□ -1.05
NPHP1-201ENST00000316534 MAP3K14Q99558 947 aa8.46□□□□□ -1.05
NPHP1-201ENST00000316534 ANGEL1Q9UNK9 670 aaKnown RBP8.46□□□□□ -1.05
NPHP1-201ENST00000316534 NPR1P16066 1061 aa8.46□□□□□ -1.06
NPHP1-201ENST00000316534 TBC1D16Q8TBP0 767 aa8.46□□□□□ -1.06
NPHP1-201ENST00000316534 AIDAQ96BJ3 306 aa8.46□□□□□ -1.06
NPHP1-201ENST00000316534 ARMT1Q9H993 441 aa8.46□□□□□ -1.06
NPHP1-201ENST00000316534 TCP11L1Q9NUJ3 509 aa8.46□□□□□ -1.06
NPHP1-201ENST00000316534 ATP6V1DQ9Y5K8 247 aa8.46□□□□□ -1.06
NPHP1-201ENST00000316534 MAGEB6P1A0A0J9YX57 407 aa8.46□□□□□ -1.06
NPHP1-201ENST00000316534 IDH1O75874 414 aaKnown RBP8.46□□□□□ -1.06
NPHP1-201ENST00000316534 APOBRQ0VD83 1088 aa8.46□□□□□ -1.06
NPHP1-201ENST00000316534 PPP2R5BQ15173 497 aa8.46□□□□□ -1.06
NPHP1-201ENST00000316534 SPTY2D1Q68D10 685 aaPredicted RBP8.46□□□□□ -1.06
NPHP1-201ENST00000316534 FUCA2Q9BTY2 467 aa8.46□□□□□ -1.06
NPHP1-201ENST00000316534 FAM177BA6PVY3 158 aa8.45□□□□□ -1.06
NPHP1-201ENST00000316534 GOLGA6L22H0YM25 854 aa8.45□□□□□ -1.06
NPHP1-201ENST00000316534 CTR9Q6PD62 1173 aa8.45□□□□□ -1.06
NPHP1-201ENST00000316534 POTEAQ6S8J7 498 aa8.45□□□□□ -1.06
NPHP1-201ENST00000316534 CDC37L1Q7L3B6 337 aa8.45□□□□□ -1.06
NPHP1-201ENST00000316534 GPR75-ASB3A0A0A6YYF3 556 aa8.45□□□□□ -1.06
NPHP1-201ENST00000316534 PPARAQ07869 468 aa8.45□□□□□ -1.06
NPHP1-201ENST00000316534 FUT2Q10981 343 aa8.45□□□□□ -1.06
NPHP1-201ENST00000316534 MCTP1Q6DN14 999 aa8.45□□□□□ -1.06
NPHP1-201ENST00000316534 BICDL1Q6ZP65 573 aa8.45□□□□□ -1.06
NPHP1-201ENST00000316534 FAM43AQ8N2R8 423 aa8.45□□□□□ -1.06
NPHP1-201ENST00000316534 POLLQ9UGP5 575 aa8.45□□□□□ -1.06
NPHP1-201ENST00000316534 MROH7-TTC4A0A0A0MT08 1334 aa8.45□□□□□ -1.06
NPHP1-201ENST00000316534 PAPPA2Q9BXP8 1791 aa8.45□□□□□ -1.06
NPHP1-201ENST00000316534 PRKAB2O43741 272 aa8.45□□□□□ -1.06
NPHP1-201ENST00000316534 USP48Q86UV5 1035 aa8.45□□□□□ -1.06
NPHP1-201ENST00000316534 SLC51AQ86UW1 340 aa8.45□□□□□ -1.06
NPHP1-201ENST00000316534 CD209Q9NNX6 404 aa8.45□□□□□ -1.06
NPHP1-201ENST00000316534 NSFL1CQ9UNZ2 370 aaKnown RBP8.45□□□□□ -1.06
NPHP1-201ENST00000316534 JAK2O60674 1132 aa8.44□□□□□ -1.06
NPHP1-201ENST00000316534 UBE2HP62256 183 aa8.44□□□□□ -1.06
NPHP1-201ENST00000316534 APOA5Q6Q788 366 aa8.44□□□□□ -1.06
NPHP1-201ENST00000316534 ZNF804AQ7Z570 1209 aa8.44□□□□□ -1.06
NPHP1-201ENST00000316534 ZSWIM5Q9P217 1185 aa8.44□□□□□ -1.06
NPHP1-201ENST00000316534 FAM237AA0A1B0GTK4 181 aa8.44□□□□□ -1.06
NPHP1-201ENST00000316534 PTPDC1A2A3K4 754 aa8.44□□□□□ -1.06
NPHP1-201ENST00000316534 PHF14O94880 888 aa8.44□□□□□ -1.06
NPHP1-201ENST00000316534 CYP7A1P22680 504 aa8.44□□□□□ -1.06
NPHP1-201ENST00000316534 COL4A5P29400 1685 aa8.44□□□□□ -1.06
NPHP1-201ENST00000316534 TCEANC2Q96MN5 208 aa8.44□□□□□ -1.06
NPHP1-201ENST00000316534 RNF41Q9H4P4 317 aaPredicted RBP8.44□□□□□ -1.06
NPHP1-201ENST00000316534 DCP1AQ9NPI6 582 aaPredicted RBP8.44□□□□□ -1.06
NPHP1-201ENST00000316534 ARPP21Q9UBL0 812 aaPredicted RBP8.44□□□□□ -1.06
NPHP1-201ENST00000316534 DICER1Q9UPY3 1922 aaKnown RBP8.44□□□□□ -1.06
NPHP1-201ENST00000316534 MYO3BQ8WXR4 1341 aa8.44□□□□□ -1.06
NPHP1-201ENST00000316534 PPEF1O14829 653 aaPredicted RBP8.44□□□□□ -1.06
NPHP1-201ENST00000316534 PDE6BP35913 854 aa8.44□□□□□ -1.06
NPHP1-201ENST00000316534 ZSCAN23Q3MJ62 389 aa8.44□□□□□ -1.06
NPHP1-201ENST00000316534 FBXO41Q8TF61 875 aa8.44□□□□□ -1.06
NPHP1-201ENST00000316534 NACAP1Q9BZK3 213 aa8.44□□□□□ -1.06
NPHP1-201ENST00000316534 TMEM63CQ9P1W3 806 aa8.44□□□□□ -1.06
NPHP1-201ENST00000316534 RCOR1Q9UKL0 485 aa8.44□□□□□ -1.06
NPHP1-201ENST00000316534 SLC4A4Q9Y6R1 1079 aa8.44□□□□□ -1.06
NPHP1-201ENST00000316534 NPM3O75607 178 aaKnown RBP8.43□□□□□ -1.06
NPHP1-201ENST00000316534 GSTO1P78417 241 aa8.43□□□□□ -1.06
NPHP1-201ENST00000316534 GAS2L3Q86XJ1 694 aa8.43□□□□□ -1.06
NPHP1-201ENST00000316534 FAM177A1Q8N128 213 aaPredicted RBP8.43□□□□□ -1.06
NPHP1-201ENST00000316534 TMTC2Q8N394 836 aa8.43□□□□□ -1.06
NPHP1-201ENST00000316534 LARP6Q9BRS8 491 aaKnown RBP8.43□□□□□ -1.06
NPHP1-201ENST00000316534 COA1Q9GZY4 146 aa8.43□□□□□ -1.06
NPHP1-201ENST00000316534 A0A0G2JS52 829 aa8.43□□□□□ -1.06
NPHP1-201ENST00000316534 RHBDL3P58872 404 aa8.43□□□□□ -1.06
NPHP1-201ENST00000316534 GRIPAP1Q4V328 841 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 552.3 ms