RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 IFFO2Q5TF58 517 aa19.99■□□□□ 0.79
SCAMP4-201ENST00000316097 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.99■□□□□ 0.79
SCAMP4-201ENST00000316097 PUS7LQ9H0K6 701 aaKnown RBP19.99■□□□□ 0.79
SCAMP4-201ENST00000316097 GOLGB1Q14789 3259 aaKnown RBP19.98■□□□□ 0.79
SCAMP4-201ENST00000316097 NFIXQ14938 502 aa19.98■□□□□ 0.79
SCAMP4-201ENST00000316097 FBXO38Q6PIJ6 1188 aa19.98■□□□□ 0.79
SCAMP4-201ENST00000316097 ZNF831Q5JPB2 1677 aa19.98■□□□□ 0.79
SCAMP4-201ENST00000316097 A0A087WWV3 80 aa19.98■□□□□ 0.79
SCAMP4-201ENST00000316097 BECN2A8MW95 431 aa19.98■□□□□ 0.79
SCAMP4-201ENST00000316097 IDH1O75874 414 aaKnown RBP19.98■□□□□ 0.79
SCAMP4-201ENST00000316097 TPTE2Q6XPS3 522 aa19.98■□□□□ 0.79
SCAMP4-201ENST00000316097 ANKRD18AQ8IVF6 992 aa19.98■□□□□ 0.79
SCAMP4-201ENST00000316097 CYP21A2P08686 494 aa19.97■□□□□ 0.79
SCAMP4-201ENST00000316097 SF3B3Q15393 1217 aaKnown RBP19.97■□□□□ 0.79
SCAMP4-201ENST00000316097 STX1AQ16623 288 aa19.97■□□□□ 0.79
SCAMP4-201ENST00000316097 TTLL5Q6EMB2 1281 aa19.97■□□□□ 0.79
SCAMP4-201ENST00000316097 HMG20BQ9P0W2 317 aa19.97■□□□□ 0.79
SCAMP4-201ENST00000316097 BCORQ6W2J9 1755 aa19.97■□□□□ 0.79
SCAMP4-201ENST00000316097 CCZ1BP86790 482 aa19.97■□□□□ 0.79
SCAMP4-201ENST00000316097 CCZ1P86791 482 aaPredicted RBP19.97■□□□□ 0.79
SCAMP4-201ENST00000316097 ERO1AQ96HE7 468 aa19.97■□□□□ 0.79
SCAMP4-201ENST00000316097 NLRP3Q96P20 1036 aa19.97■□□□□ 0.79
SCAMP4-201ENST00000316097 ALDH8A1Q9H2A2 487 aaPredicted RBP19.97■□□□□ 0.79
SCAMP4-201ENST00000316097 HELLSQ9NRZ9 838 aa19.97■□□□□ 0.79
SCAMP4-201ENST00000316097 HSPD1P10809 573 aaKnown RBP19.96■□□□□ 0.79
SCAMP4-201ENST00000316097 SLC5A1P13866 664 aa19.96■□□□□ 0.79
SCAMP4-201ENST00000316097 RASGRF1Q13972 1273 aa19.96■□□□□ 0.79
SCAMP4-201ENST00000316097 GTF3C6Q969F1 213 aa19.96■□□□□ 0.79
SCAMP4-201ENST00000316097 CDC5LQ99459 802 aaKnown RBP19.96■□□□□ 0.79
SCAMP4-201ENST00000316097 HSP90B1P14625 803 aaKnown RBP19.96■□□□□ 0.79
SCAMP4-201ENST00000316097 SLC9C2Q5TAH2 1124 aa19.96■□□□□ 0.79
SCAMP4-201ENST00000316097 CFAP45Q9UL16 551 aa19.96■□□□□ 0.79
SCAMP4-201ENST00000316097 BRWD3Q6RI45 1802 aa19.96■□□□□ 0.79
SCAMP4-201ENST00000316097 GYG1P46976 350 aa19.95■□□□□ 0.78
SCAMP4-201ENST00000316097 SLC10A5Q5PT55 438 aa19.95■□□□□ 0.78
SCAMP4-201ENST00000316097 C4BP0C0L5 1744 aa19.95■□□□□ 0.78
SCAMP4-201ENST00000316097 FOSBP53539 338 aa19.95■□□□□ 0.78
SCAMP4-201ENST00000316097 CCAR1Q8IX12 1150 aaKnown RBP19.95■□□□□ 0.78
SCAMP4-201ENST00000316097 CCAR2Q8N163 923 aaKnown RBP19.95■□□□□ 0.78
SCAMP4-201ENST00000316097 MINPP1Q9UNW1 487 aa19.95■□□□□ 0.78
SCAMP4-201ENST00000316097 LY75O60449 1722 aa19.94■□□□□ 0.78
SCAMP4-201ENST00000316097 TXNRD1Q16881 649 aa19.94■□□□□ 0.78
SCAMP4-201ENST00000316097 FTOQ9C0B1 505 aaKnown RBP eCLIP19.94■□□□□ 0.78
SCAMP4-201ENST00000316097 NYXQ9GZU5 481 aa19.94■□□□□ 0.78
SCAMP4-201ENST00000316097 WWC3Q9ULE0 1092 aa19.94■□□□□ 0.78
SCAMP4-201ENST00000316097 SLU7O95391 586 aaKnown RBP19.94■□□□□ 0.78
SCAMP4-201ENST00000316097 SPATA5Q8NB90 893 aa19.94■□□□□ 0.78
SCAMP4-201ENST00000316097 LRRC2Q9BYS8 371 aa19.94■□□□□ 0.78
SCAMP4-201ENST00000316097 SPEF2Q9C093 1822 aa19.94■□□□□ 0.78
SCAMP4-201ENST00000316097 KLRK1P26718 216 aa19.93■□□□□ 0.78
SCAMP4-201ENST00000316097 ARID4AP29374 1257 aaPredicted RBP19.93■□□□□ 0.78
SCAMP4-201ENST00000316097 RFX7Q2KHR2 1363 aa19.93■□□□□ 0.78
SCAMP4-201ENST00000316097 STOX1Q6ZVD7 989 aa19.93■□□□□ 0.78
SCAMP4-201ENST00000316097 TAF1LQ8IZX4 1826 aa19.93■□□□□ 0.78
SCAMP4-201ENST00000316097 FBXW7Q969H0 707 aa19.93■□□□□ 0.78
SCAMP4-201ENST00000316097 GOLPH3LQ9H4A5 285 aa19.93■□□□□ 0.78
SCAMP4-201ENST00000316097 ZSCAN16Q9H4T2 348 aaPredicted RBP19.93■□□□□ 0.78
SCAMP4-201ENST00000316097 CTAGE5O15320 804 aa19.93■□□□□ 0.78
SCAMP4-201ENST00000316097 FOXP2O15409 715 aa19.93■□□□□ 0.78
SCAMP4-201ENST00000316097 DHX40Q8IX18 779 aaKnown RBP19.93■□□□□ 0.78
SCAMP4-201ENST00000316097 ST7Q9NRC1 585 aa19.93■□□□□ 0.78
SCAMP4-201ENST00000316097 RTL9Q8NET4 1388 aa19.92■□□□□ 0.78
SCAMP4-201ENST00000316097 BSDC1Q9NW68 430 aaPredicted RBP19.92■□□□□ 0.78
SCAMP4-201ENST00000316097 GYS1P13807 737 aa19.92■□□□□ 0.78
SCAMP4-201ENST00000316097 HAND2P61296 217 aa19.92■□□□□ 0.78
SCAMP4-201ENST00000316097 RPS8P62241 208 aaKnown RBP19.92■□□□□ 0.78
SCAMP4-201ENST00000316097 Q6ZUG5 572 aa19.92■□□□□ 0.78
SCAMP4-201ENST00000316097 BBXQ8WY36 941 aaPredicted RBP19.92■□□□□ 0.78
SCAMP4-201ENST00000316097 FAM53CQ9NYF3 392 aa19.92■□□□□ 0.78
SCAMP4-201ENST00000316097 U3KPZ7 1027 aaPredicted RBP19.92■□□□□ 0.78
SCAMP4-201ENST00000316097 TM4SF1P30408 202 aa19.91■□□□□ 0.78
SCAMP4-201ENST00000316097 CCDC73Q6ZRK6 1079 aa19.91■□□□□ 0.78
SCAMP4-201ENST00000316097 AOPEPQ8N6M6 819 aa19.91■□□□□ 0.78
SCAMP4-201ENST00000316097 ERCC4Q92889 916 aaPredicted RBP19.91■□□□□ 0.78
SCAMP4-201ENST00000316097 SCN7AQ01118 1682 aa19.91■□□□□ 0.78
SCAMP4-201ENST00000316097 LRP5O75197 1615 aa19.91■□□□□ 0.78
SCAMP4-201ENST00000316097 CCDC66A2RUB6 948 aa19.91■□□□□ 0.78
SCAMP4-201ENST00000316097 ERICH4A6NGS2 130 aa19.91■□□□□ 0.78
SCAMP4-201ENST00000316097 ZBTB22O15209 634 aa19.91■□□□□ 0.78
SCAMP4-201ENST00000316097 APBA3O96018 575 aa19.91■□□□□ 0.78
SCAMP4-201ENST00000316097 ZNF772Q68DY9 489 aaPredicted RBP19.91■□□□□ 0.78
SCAMP4-201ENST00000316097 ZNF512BQ96KM6 892 aaPredicted RBP19.91■□□□□ 0.78
SCAMP4-201ENST00000316097 NEK1Q96PY6 1258 aa19.91■□□□□ 0.78
SCAMP4-201ENST00000316097 ZNF532Q9HCE3 1301 aa19.91■□□□□ 0.78
SCAMP4-201ENST00000316097 KINO60870 393 aaKnown RBP19.9■□□□□ 0.78
SCAMP4-201ENST00000316097 TSGA10IPQ3SY00 556 aa19.9■□□□□ 0.78
SCAMP4-201ENST00000316097 CHST3Q7LGC8 479 aa19.9■□□□□ 0.78
SCAMP4-201ENST00000316097 ANO10Q9NW15 660 aa19.9■□□□□ 0.78
SCAMP4-201ENST00000316097 UQCRFS1P1P0C7P4 283 aa19.9■□□□□ 0.78
SCAMP4-201ENST00000316097 APPBP2Q92624 585 aa19.9■□□□□ 0.78
SCAMP4-201ENST00000316097 ZNF446Q9NWS9 450 aa19.9■□□□□ 0.78
SCAMP4-201ENST00000316097 AKAP11Q9UKA4 1901 aa19.9■□□□□ 0.78
SCAMP4-201ENST00000316097 GPAA1O43292 621 aa19.89■□□□□ 0.78
SCAMP4-201ENST00000316097 ADD1P35611 737 aaKnown RBP19.89■□□□□ 0.78
SCAMP4-201ENST00000316097 ADD2P35612 726 aa19.89■□□□□ 0.78
SCAMP4-201ENST00000316097 KRT32Q14532 448 aa19.89■□□□□ 0.78
SCAMP4-201ENST00000316097 CNBD1Q8NA66 436 aa19.89■□□□□ 0.78
SCAMP4-201ENST00000316097 FGD1P98174 961 aa19.89■□□□□ 0.77
SCAMP4-201ENST00000316097 SNW1Q13573 536 aaKnown RBP19.89■□□□□ 0.77
SCAMP4-201ENST00000316097 CEP57L1Q8IYX8 460 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms