RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 VPS37DQ86XT2 251 aa22.3■■□□□ 1.16
CD55-201ENST00000314754 MIGA1Q8NAN2 632 aa22.3■■□□□ 1.16
CD55-201ENST00000314754 IGDCC4Q8TDY8 1250 aa22.3■■□□□ 1.16
CD55-201ENST00000314754 C8orf76Q96K31 380 aa22.3■■□□□ 1.16
CD55-201ENST00000314754 FTOQ9C0B1 505 aaKnown RBP eCLIP22.3■■□□□ 1.16
CD55-201ENST00000314754 DACT1Q9NYF0 836 aa22.3■■□□□ 1.16
CD55-201ENST00000314754 RCOR1Q9UKL0 485 aa22.3■■□□□ 1.16
CD55-201ENST00000314754 CYP7A1P22680 504 aa22.29■■□□□ 1.16
CD55-201ENST00000314754 TDO2P48775 406 aa22.29■■□□□ 1.16
CD55-201ENST00000314754 CTDSPL2Q05D32 466 aa22.29■■□□□ 1.16
CD55-201ENST00000314754 SGMS1Q86VZ5 419 aa22.29■■□□□ 1.16
CD55-201ENST00000314754 RGS22Q8NE09 1264 aa22.29■■□□□ 1.16
CD55-201ENST00000314754 ABCF2Q9UG63 623 aa22.29■■□□□ 1.16
CD55-201ENST00000314754 KLRK1P26718 216 aa22.29■■□□□ 1.16
CD55-201ENST00000314754 MAP3K11Q16584 847 aa22.29■■□□□ 1.16
CD55-201ENST00000314754 FBXO18Q8NFZ0 1043 aa22.29■■□□□ 1.16
CD55-201ENST00000314754 BICD2Q8TD16 824 aa22.29■■□□□ 1.16
CD55-201ENST00000314754 FAM84BQ96KN1 310 aaPredicted RBP22.29■■□□□ 1.16
CD55-201ENST00000314754 KRT23Q9C075 422 aa22.29■■□□□ 1.16
CD55-201ENST00000314754 CCDC192P0DO97 292 aa22.28■■□□□ 1.16
CD55-201ENST00000314754 LIFRP42702 1097 aa22.28■■□□□ 1.16
CD55-201ENST00000314754 METAP2P50579 478 aaKnown RBP eCLIP22.28■■□□□ 1.16
CD55-201ENST00000314754 MEX3CQ5U5Q3 659 aaKnown RBP22.28■■□□□ 1.16
CD55-201ENST00000314754 ILDR1Q86SU0 546 aaPredicted RBP22.28■■□□□ 1.16
CD55-201ENST00000314754 STAG1Q8WVM7 1258 aa22.28■■□□□ 1.16
CD55-201ENST00000314754 SEMA3EO15041 775 aa22.27■■□□□ 1.16
CD55-201ENST00000314754 CDKL5O76039 1030 aa22.27■■□□□ 1.16
CD55-201ENST00000314754 CEBPZQ03701 1054 aaKnown RBP22.27■■□□□ 1.16
CD55-201ENST00000314754 MFSD6Q6ZSS7 791 aa22.27■■□□□ 1.16
CD55-201ENST00000314754 LY9Q9HBG7 655 aa22.27■■□□□ 1.16
CD55-201ENST00000314754 RAI14Q9P0K7 980 aa22.27■■□□□ 1.16
CD55-201ENST00000314754 TMEM67Q5HYA8 995 aa22.27■■□□□ 1.16
CD55-201ENST00000314754 OTUD7BQ6GQQ9 843 aa22.27■■□□□ 1.16
CD55-201ENST00000314754 FBXO33Q7Z6M2 555 aa22.27■■□□□ 1.16
CD55-201ENST00000314754 ZSCAN30Q86W11 494 aa22.27■■□□□ 1.16
CD55-201ENST00000314754 USP28Q96RU2 1077 aa22.27■■□□□ 1.16
CD55-201ENST00000314754 ANKRD2Q9GZV1 360 aa22.27■■□□□ 1.16
CD55-201ENST00000314754 ZSWIM5Q9P217 1185 aa22.27■■□□□ 1.16
CD55-201ENST00000314754 BAZ2AQ9UIF9 1905 aaKnown RBP22.27■■□□□ 1.16
CD55-201ENST00000314754 KDM4AO75164 1064 aa22.26■■□□□ 1.15
CD55-201ENST00000314754 RXRAP19793 462 aa22.26■■□□□ 1.15
CD55-201ENST00000314754 TNMDQ9H2S6 317 aa22.26■■□□□ 1.15
CD55-201ENST00000314754 CLSTN2Q9H4D0 955 aa22.26■■□□□ 1.15
CD55-201ENST00000314754 ONECUT3O60422 494 aaPredicted RBP22.26■■□□□ 1.15
CD55-201ENST00000314754 CPLX2Q6PUV4 134 aaKnown RBP22.26■■□□□ 1.15
CD55-201ENST00000314754 RBM43Q6ZSC3 357 aaKnown RBP22.26■■□□□ 1.15
CD55-201ENST00000314754 MAGEB6P1A0A0J9YX57 407 aa22.25■■□□□ 1.15
CD55-201ENST00000314754 ZBTB43O43298 467 aa22.25■■□□□ 1.15
CD55-201ENST00000314754 NR1I2O75469 434 aa22.25■■□□□ 1.15
CD55-201ENST00000314754 RFC4P35249 363 aa22.25■■□□□ 1.15
CD55-201ENST00000314754 NFXL1Q6ZNB6 911 aa22.25■■□□□ 1.15
CD55-201ENST00000314754 GJB4Q9NTQ9 266 aa22.25■■□□□ 1.15
CD55-201ENST00000314754 AFF2P51816 1311 aa22.25■■□□□ 1.15
CD55-201ENST00000314754 PDS5AQ29RF7 1337 aaKnown RBP22.25■■□□□ 1.15
CD55-201ENST00000314754 CAMK4Q16566 473 aa22.25■■□□□ 1.15
CD55-201ENST00000314754 BRAPQ7Z569 592 aa22.25■■□□□ 1.15
CD55-201ENST00000314754 SLC51AQ86UW1 340 aa22.25■■□□□ 1.15
CD55-201ENST00000314754 MICU3Q86XE3 530 aa22.25■■□□□ 1.15
CD55-201ENST00000314754 RNF41Q9H4P4 317 aaPredicted RBP22.25■■□□□ 1.15
CD55-201ENST00000314754 IFIT3O14879 490 aaKnown RBP22.24■■□□□ 1.15
CD55-201ENST00000314754 TRAPPC3LQ5T215 181 aa22.24■■□□□ 1.15
CD55-201ENST00000314754 MTA3Q9BTC8 594 aa22.24■■□□□ 1.15
CD55-201ENST00000314754 STK11IPQ8N1F8 1099 aa22.23■■□□□ 1.15
CD55-201ENST00000314754 RIOK1Q9BRS2 568 aaKnown RBP22.23■■□□□ 1.15
CD55-201ENST00000314754 TM4SF1P30408 202 aa22.23■■□□□ 1.15
CD55-201ENST00000314754 SART3Q15020 963 aaKnown RBP22.23■■□□□ 1.15
CD55-201ENST00000314754 RTEL1Q9NZ71 1219 aa22.23■■□□□ 1.15
CD55-201ENST00000314754 SLC12A7Q9Y666 1083 aa22.23■■□□□ 1.15
CD55-201ENST00000314754 CDC27P30260 824 aa22.22■■□□□ 1.15
CD55-201ENST00000314754 PPARAQ07869 468 aa22.22■■□□□ 1.15
CD55-201ENST00000314754 ZNF384Q8TF68 577 aa22.22■■□□□ 1.15
CD55-201ENST00000314754 MYL10Q9BUA6 226 aa22.22■■□□□ 1.15
CD55-201ENST00000314754 GOLGA8AA7E2F4 631 aa22.22■■□□□ 1.15
CD55-201ENST00000314754 SMIM22K7EJ46 135 aa22.22■■□□□ 1.15
CD55-201ENST00000314754 NPHP1O15259 732 aa22.22■■□□□ 1.15
CD55-201ENST00000314754 CCDC144CPQ8IYA2 1237 aa22.22■■□□□ 1.15
CD55-201ENST00000314754 SDR42E1Q8WUS8 393 aa22.22■■□□□ 1.15
CD55-201ENST00000314754 LRRC4BQ9NT99 713 aa22.22■■□□□ 1.15
CD55-201ENST00000314754 ANAPC4Q9UJX5 808 aa22.22■■□□□ 1.15
CD55-201ENST00000314754 NID2Q14112 1375 aa22.22■■□□□ 1.15
CD55-201ENST00000314754 CCDC69A6NI79 296 aa22.21■■□□□ 1.15
CD55-201ENST00000314754 HIBADHP31937 336 aaKnown RBP22.21■■□□□ 1.15
CD55-201ENST00000314754 HSPA1LP34931 641 aa22.21■■□□□ 1.15
CD55-201ENST00000314754 TYRO3Q06418 890 aa22.21■■□□□ 1.15
CD55-201ENST00000314754 NTRK3Q16288 839 aa22.21■■□□□ 1.15
CD55-201ENST00000314754 FAM196AQ6ZSG2 479 aa22.21■■□□□ 1.15
CD55-201ENST00000314754 CCDC39Q9UFE4 941 aa22.21■■□□□ 1.15
CD55-201ENST00000314754 USP25Q9UHP3 1055 aa22.21■■□□□ 1.15
CD55-201ENST00000314754 TRPC5Q9UL62 973 aaPredicted RBP22.21■■□□□ 1.15
CD55-201ENST00000314754 MYH2Q9UKX2 1941 aa22.21■■□□□ 1.15
CD55-201ENST00000314754 RRP12Q5JTH9 1297 aaKnown RBP22.21■■□□□ 1.15
CD55-201ENST00000314754 SEPT12Q8IYM1 358 aa22.21■■□□□ 1.15
CD55-201ENST00000314754 AIFM3Q96NN9 605 aa22.21■■□□□ 1.15
CD55-201ENST00000314754 BCL11BQ9C0K0 894 aaPredicted RBP22.21■■□□□ 1.15
CD55-201ENST00000314754 TOMM22Q9NS69 142 aa22.21■■□□□ 1.15
CD55-201ENST00000314754 FAM217BQ9NTX9 383 aaPredicted RBP22.21■■□□□ 1.15
CD55-201ENST00000314754 TFCP2L1Q9NZI6 479 aa22.21■■□□□ 1.15
CD55-201ENST00000314754 NOL7Q9UMY1 257 aaKnown RBP22.21■■□□□ 1.15
CD55-201ENST00000314754 UBR3Q6ZT12 1888 aa22.2■■□□□ 1.14
CD55-201ENST00000314754 ADRA2BP18089 450 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms