RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 PGBD1Q96JS3 809 aa14.55□□□□□ -0.08
RNF4-201ENST00000314289 DACT1Q9NYF0 836 aa14.55□□□□□ -0.08
RNF4-201ENST00000314289 ZSWIM5Q9P217 1185 aa14.55□□□□□ -0.08
RNF4-201ENST00000314289 COL1A1P02452 1464 aaPredicted RBP14.55□□□□□ -0.08
RNF4-201ENST00000314289 SPATA31A6Q5VVP1 1343 aa14.55□□□□□ -0.08
RNF4-201ENST00000314289 EVX2Q03828 476 aa14.55□□□□□ -0.08
RNF4-201ENST00000314289 CSPP1Q1MSJ5 1256 aa14.55□□□□□ -0.08
RNF4-201ENST00000314289 TRAPPC3LQ5T215 181 aa14.55□□□□□ -0.08
RNF4-201ENST00000314289 CCDC82Q8N4S0 544 aa14.55□□□□□ -0.08
RNF4-201ENST00000314289 BICD2Q8TD16 824 aa14.55□□□□□ -0.08
RNF4-201ENST00000314289 PLCB2Q00722 1185 aa14.54□□□□□ -0.08
RNF4-201ENST00000314289 PDLIM2Q96JY6 352 aa14.54□□□□□ -0.08
RNF4-201ENST00000314289 ORC3Q9UBD5 711 aaPredicted RBP14.54□□□□□ -0.08
RNF4-201ENST00000314289 ANGEL1Q9UNK9 670 aaKnown RBP14.54□□□□□ -0.08
RNF4-201ENST00000314289 RTL9Q8NET4 1388 aa14.54□□□□□ -0.08
RNF4-201ENST00000314289 SALL1Q9NSC2 1324 aa14.54□□□□□ -0.08
RNF4-201ENST00000314289 HMGN5P82970 282 aaKnown RBP14.54□□□□□ -0.08
RNF4-201ENST00000314289 CDC27P30260 824 aa14.53□□□□□ -0.08
RNF4-201ENST00000314289 NFIXQ14938 502 aa14.53□□□□□ -0.08
RNF4-201ENST00000314289 RC3H1Q5TC82 1133 aaKnown RBP14.53□□□□□ -0.08
RNF4-201ENST00000314289 CMTR1Q8N1G2 835 aaKnown RBP14.53□□□□□ -0.08
RNF4-201ENST00000314289 USP28Q96RU2 1077 aa14.53□□□□□ -0.08
RNF4-201ENST00000314289 SCAND2PQ9GZW5 306 aaPredicted RBP14.53□□□□□ -0.08
RNF4-201ENST00000314289 ZKSCAN5Q9Y2L8 839 aa14.53□□□□□ -0.08
RNF4-201ENST00000314289 ATRNO75882 1429 aa14.53□□□□□ -0.08
RNF4-201ENST00000314289 BCORQ6W2J9 1755 aa14.53□□□□□ -0.08
RNF4-201ENST00000314289 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.53□□□□□ -0.08
RNF4-201ENST00000314289 NR1I2O75469 434 aa14.53□□□□□ -0.08
RNF4-201ENST00000314289 PTMAP06454 111 aaKnown RBP14.53□□□□□ -0.08
RNF4-201ENST00000314289 HS1BP3Q53T59 392 aa14.53□□□□□ -0.08
RNF4-201ENST00000314289 TMEM67Q5HYA8 995 aa14.53□□□□□ -0.08
RNF4-201ENST00000314289 ILDR1Q86SU0 546 aaPredicted RBP14.53□□□□□ -0.08
RNF4-201ENST00000314289 ZNF384Q8TF68 577 aa14.53□□□□□ -0.08
RNF4-201ENST00000314289 IFIT3O14879 490 aaKnown RBP14.52□□□□□ -0.08
RNF4-201ENST00000314289 PRDM1O75626 825 aa14.52□□□□□ -0.08
RNF4-201ENST00000314289 NYXQ9GZU5 481 aa14.52□□□□□ -0.08
RNF4-201ENST00000314289 GNL3LQ9NVN8 582 aaKnown RBP14.52□□□□□ -0.08
RNF4-201ENST00000314289 SH2B2O14492 632 aaPredicted RBP14.52□□□□□ -0.08
RNF4-201ENST00000314289 ZNF500O60304 480 aaPredicted RBP14.52□□□□□ -0.08
RNF4-201ENST00000314289 TRIM37O94972 964 aa14.52□□□□□ -0.08
RNF4-201ENST00000314289 METAP2P50579 478 aaKnown RBP eCLIP14.52□□□□□ -0.08
RNF4-201ENST00000314289 UBE4AQ14139 1066 aa14.52□□□□□ -0.08
RNF4-201ENST00000314289 CERKQ8TCT0 537 aa14.52□□□□□ -0.08
RNF4-201ENST00000314289 QTRT2Q9H974 415 aaKnown RBP14.52□□□□□ -0.08
RNF4-201ENST00000314289 PRDX5P30044 214 aa14.52□□□□□ -0.09
RNF4-201ENST00000314289 SLC10A5Q5PT55 438 aa14.52□□□□□ -0.09
RNF4-201ENST00000314289 APOA5Q6Q788 366 aa14.52□□□□□ -0.09
RNF4-201ENST00000314289 MFSD6Q6ZSS7 791 aa14.52□□□□□ -0.09
RNF4-201ENST00000314289 C8orf76Q96K31 380 aa14.52□□□□□ -0.09
RNF4-201ENST00000314289 ANKIB1Q9P2G1 1089 aa14.52□□□□□ -0.09
RNF4-201ENST00000314289 ZNF804BA4D1E1 1349 aa14.52□□□□□ -0.09
RNF4-201ENST00000314289 MAGEB6P1A0A0J9YX57 407 aa14.51□□□□□ -0.09
RNF4-201ENST00000314289 TM4SF1P30408 202 aa14.51□□□□□ -0.09
RNF4-201ENST00000314289 EVCP57679 992 aa14.51□□□□□ -0.09
RNF4-201ENST00000314289 IGDCC4Q8TDY8 1250 aa14.51□□□□□ -0.09
RNF4-201ENST00000314289 AKNAD1Q5T1N1 836 aa14.51□□□□□ -0.09
RNF4-201ENST00000314289 ZSCAN16Q9H4T2 348 aaPredicted RBP14.51□□□□□ -0.09
RNF4-201ENST00000314289 LY9Q9HBG7 655 aa14.51□□□□□ -0.09
RNF4-201ENST00000314289 USP25Q9UHP3 1055 aa14.51□□□□□ -0.09
RNF4-201ENST00000314289 ARAP2Q8WZ64 1704 aa14.51□□□□□ -0.09
RNF4-201ENST00000314289 NAA16Q6N069 864 aaPredicted RBP14.5□□□□□ -0.09
RNF4-201ENST00000314289 NACAP1Q9BZK3 213 aa14.5□□□□□ -0.09
RNF4-201ENST00000314289 NUP62CLQ9H1M0 184 aa14.5□□□□□ -0.09
RNF4-201ENST00000314289 AATFQ9NY61 560 aaKnown RBP eCLIP14.5□□□□□ -0.09
RNF4-201ENST00000314289 KIF3AQ9Y496 699 aa14.5□□□□□ -0.09
RNF4-201ENST00000314289 CASZ1Q86V15 1759 aa14.5□□□□□ -0.09
RNF4-201ENST00000314289 A0A087WWV3 80 aa14.5□□□□□ -0.09
RNF4-201ENST00000314289 KIF28PB7ZC32 967 aa14.5□□□□□ -0.09
RNF4-201ENST00000314289 HIBADHP31937 336 aaKnown RBP14.5□□□□□ -0.09
RNF4-201ENST00000314289 CNBD1Q8NA66 436 aa14.5□□□□□ -0.09
RNF4-201ENST00000314289 ERCC4Q92889 916 aaPredicted RBP14.5□□□□□ -0.09
RNF4-201ENST00000314289 CHMP4CQ96CF2 233 aa14.5□□□□□ -0.09
RNF4-201ENST00000314289 CCDC39Q9UFE4 941 aa14.5□□□□□ -0.09
RNF4-201ENST00000314289 TRPC5Q9UL62 973 aaPredicted RBP14.5□□□□□ -0.09
RNF4-201ENST00000314289 ELP1O95163 1332 aa14.5□□□□□ -0.09
RNF4-201ENST00000314289 ZBTB43O43298 467 aa14.49□□□□□ -0.09
RNF4-201ENST00000314289 CFAP45Q9UL16 551 aa14.49□□□□□ -0.09
RNF4-201ENST00000314289 DHX16O60231 1041 aaKnown RBP14.49□□□□□ -0.09
RNF4-201ENST00000314289 PDIA4P13667 645 aaKnown RBP14.49□□□□□ -0.09
RNF4-201ENST00000314289 ME1P48163 572 aa14.49□□□□□ -0.09
RNF4-201ENST00000314289 TERF1P54274 439 aa14.49□□□□□ -0.09
RNF4-201ENST00000314289 MECOMQ03112 1051 aa14.49□□□□□ -0.09
RNF4-201ENST00000314289 PPARAQ07869 468 aa14.49□□□□□ -0.09
RNF4-201ENST00000314289 FBXL16Q8N461 479 aa14.49□□□□□ -0.09
RNF4-201ENST00000314289 NUP133Q8WUM0 1156 aa14.49□□□□□ -0.09
RNF4-201ENST00000314289 TNMDQ9H2S6 317 aa14.49□□□□□ -0.09
RNF4-201ENST00000314289 SLC12A7Q9Y666 1083 aa14.49□□□□□ -0.09
RNF4-201ENST00000314289 LAMB2P55268 1798 aa14.49□□□□□ -0.09
RNF4-201ENST00000314289 GOLGA8AA7E2F4 631 aa14.48□□□□□ -0.09
RNF4-201ENST00000314289 CLIC4Q9Y696 253 aa14.48□□□□□ -0.09
RNF4-201ENST00000314289 CICQ96RK0 1608 aaPredicted RBP14.48□□□□□ -0.09
RNF4-201ENST00000314289 CCDC69A6NI79 296 aa14.48□□□□□ -0.09
RNF4-201ENST00000314289 ALX1Q15699 326 aa14.48□□□□□ -0.09
RNF4-201ENST00000314289 DNTTIP2Q5QJE6 756 aaKnown RBP14.48□□□□□ -0.09
RNF4-201ENST00000314289 FBXO18Q8NFZ0 1043 aa14.48□□□□□ -0.09
RNF4-201ENST00000314289 FBXW7Q969H0 707 aa14.48□□□□□ -0.09
RNF4-201ENST00000314289 RIOK1Q9BRS2 568 aaKnown RBP14.48□□□□□ -0.09
RNF4-201ENST00000314289 ALG1Q9BT22 464 aa14.48□□□□□ -0.09
RNF4-201ENST00000314289 THSD7AQ9UPZ6 1657 aa14.48□□□□□ -0.09
RNF4-201ENST00000314289 BAZ2AQ9UIF9 1905 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms