RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 EPHX2P34913 555 aa15.25■□□□□ 0.03
CHMP2A-201ENST00000312547 BTDP43251 543 aa15.25■□□□□ 0.03
CHMP2A-201ENST00000312547 RBM5P52756 815 aaKnown RBP eCLIP15.25■□□□□ 0.03
CHMP2A-201ENST00000312547 RHBDL3P58872 404 aa15.25■□□□□ 0.03
CHMP2A-201ENST00000312547 NMIQ13287 307 aaPredicted RBP15.25■□□□□ 0.03
CHMP2A-201ENST00000312547 USP50Q70EL3 339 aaPredicted RBP15.25■□□□□ 0.03
CHMP2A-201ENST00000312547 MIGA1Q8NAN2 632 aa15.25■□□□□ 0.03
CHMP2A-201ENST00000312547 SEC62Q99442 399 aaKnown RBP15.25■□□□□ 0.03
CHMP2A-201ENST00000312547 HELLSQ9NRZ9 838 aa15.25■□□□□ 0.03
CHMP2A-201ENST00000312547 M0R2C6 588 aa15.24■□□□□ 0.03
CHMP2A-201ENST00000312547 CDC45O75419 566 aa15.24■□□□□ 0.03
CHMP2A-201ENST00000312547 BAG3O95817 575 aa15.24■□□□□ 0.03
CHMP2A-201ENST00000312547 VEGFAP15692 232 aaPredicted RBP15.24■□□□□ 0.03
CHMP2A-201ENST00000312547 HSPA6P17066 643 aa15.24■□□□□ 0.03
CHMP2A-201ENST00000312547 DYNLL1P63167 89 aaKnown RBP15.24■□□□□ 0.03
CHMP2A-201ENST00000312547 NBPF9Q3BBW0 867 aa15.24■□□□□ 0.03
CHMP2A-201ENST00000312547 RBM26Q5T8P6 1007 aaKnown RBP15.24■□□□□ 0.03
CHMP2A-201ENST00000312547 CDC42EP5Q6NZY7 148 aa15.24■□□□□ 0.03
CHMP2A-201ENST00000312547 CERS3Q8IU89 383 aa15.24■□□□□ 0.03
CHMP2A-201ENST00000312547 RRAGCQ9HB90 399 aa15.24■□□□□ 0.03
CHMP2A-201ENST00000312547 NMRK2Q9NPI5 230 aa15.24■□□□□ 0.03
CHMP2A-201ENST00000312547 DIAPH3Q9NSV4 1193 aa15.24■□□□□ 0.03
CHMP2A-201ENST00000312547 AATFQ9NY61 560 aaKnown RBP eCLIP15.24■□□□□ 0.03
CHMP2A-201ENST00000312547 ADAMTSL1Q8N6G6 1762 aa15.24■□□□□ 0.03
CHMP2A-201ENST00000312547 SCN4AP35499 1836 aa15.23■□□□□ 0.03
CHMP2A-201ENST00000312547 MAGEB6P1A0A0J9YX57 407 aa15.23■□□□□ 0.03
CHMP2A-201ENST00000312547 MBD4O95243 580 aa15.23■□□□□ 0.03
CHMP2A-201ENST00000312547 SPDYE2Q495Y8 402 aa15.23■□□□□ 0.03
CHMP2A-201ENST00000312547 MCMDC2Q4G0Z9 681 aa15.23■□□□□ 0.03
CHMP2A-201ENST00000312547 CWC27Q6UX04 472 aaKnown RBP15.23■□□□□ 0.03
CHMP2A-201ENST00000312547 LCORLQ8N3X6 602 aa15.23■□□□□ 0.03
CHMP2A-201ENST00000312547 STRBPQ96SI9 672 aaKnown RBP15.23■□□□□ 0.03
CHMP2A-201ENST00000312547 IL25Q9H293 177 aa15.23■□□□□ 0.03
CHMP2A-201ENST00000312547 PLCG2P16885 1265 aa15.22■□□□□ 0.03
CHMP2A-201ENST00000312547 PNMA8AQ86V59 439 aaPredicted RBP15.22■□□□□ 0.03
CHMP2A-201ENST00000312547 SH3RF3Q8TEJ3 882 aaPredicted RBP15.22■□□□□ 0.03
CHMP2A-201ENST00000312547 AIDAQ96BJ3 306 aa15.22■□□□□ 0.03
CHMP2A-201ENST00000312547 NOL10Q9BSC4 688 aaKnown RBP15.22■□□□□ 0.03
CHMP2A-201ENST00000312547 TDRD3Q9H7E2 651 aaKnown RBP15.22■□□□□ 0.03
CHMP2A-201ENST00000312547 ARMT1Q9H993 441 aa15.22■□□□□ 0.03
CHMP2A-201ENST00000312547 USP40Q9NVE5 1235 aa15.22■□□□□ 0.03
CHMP2A-201ENST00000312547 ZNF70Q9UC06 446 aaPredicted RBP15.22■□□□□ 0.03
CHMP2A-201ENST00000312547 PGAP2Q9UHJ9 254 aa15.22■□□□□ 0.03
CHMP2A-201ENST00000312547 ASTN2O75129 1339 aaPredicted RBP15.21■□□□□ 0.03
CHMP2A-201ENST00000312547 RAD50Q92878 1312 aa15.21■□□□□ 0.03
CHMP2A-201ENST00000312547 SGSM2O43147 1006 aa15.21■□□□□ 0.03
CHMP2A-201ENST00000312547 GPAA1O43292 621 aa15.21■□□□□ 0.03
CHMP2A-201ENST00000312547 WDHD1O75717 1129 aaPredicted RBP15.21■□□□□ 0.03
CHMP2A-201ENST00000312547 FKBP1CQ5VVH2 108 aa15.21■□□□□ 0.03
CHMP2A-201ENST00000312547 ZNF589Q86UQ0 364 aaPredicted RBP15.21■□□□□ 0.03
CHMP2A-201ENST00000312547 ZC3H15Q8WU90 426 aaKnown RBP15.21■□□□□ 0.03
CHMP2A-201ENST00000312547 IDI2Q9BXS1 227 aa15.21■□□□□ 0.03
CHMP2A-201ENST00000312547 MYH7P12883 1935 aa15.2■□□□□ 0.02
CHMP2A-201ENST00000312547 MYH2Q9UKX2 1941 aa15.2■□□□□ 0.02
CHMP2A-201ENST00000312547 CLRN2A0PK11 232 aa15.2■□□□□ 0.02
CHMP2A-201ENST00000312547 MYO1BO43795 1136 aa15.2■□□□□ 0.02
CHMP2A-201ENST00000312547 NPM3O75607 178 aaKnown RBP15.2■□□□□ 0.02
CHMP2A-201ENST00000312547 CCDC129Q6ZRS4 1044 aa15.2■□□□□ 0.02
CHMP2A-201ENST00000312547 RUFY2Q8WXA3 655 aa15.2■□□□□ 0.02
CHMP2A-201ENST00000312547 ESYT1Q9BSJ8 1104 aa15.2■□□□□ 0.02
CHMP2A-201ENST00000312547 CCDC171Q6TFL3 1326 aa15.19■□□□□ 0.02
CHMP2A-201ENST00000312547 PITPNM2Q9BZ72 1349 aa15.19■□□□□ 0.02
CHMP2A-201ENST00000312547 FOXP2O15409 715 aa15.19■□□□□ 0.02
CHMP2A-201ENST00000312547 PRKAB2O43741 272 aa15.19■□□□□ 0.02
CHMP2A-201ENST00000312547 NFIAQ12857 509 aa15.19■□□□□ 0.02
CHMP2A-201ENST00000312547 ANGEL2Q5VTE6 544 aaKnown RBP15.19■□□□□ 0.02
CHMP2A-201ENST00000312547 TEX11Q8IYF3 940 aa15.19■□□□□ 0.02
CHMP2A-201ENST00000312547 CRNKL1Q9BZJ0 848 aaKnown RBP15.19■□□□□ 0.02
CHMP2A-201ENST00000312547 GGA3Q9NZ52 723 aa15.19■□□□□ 0.02
CHMP2A-201ENST00000312547 FAM198AQ9UFP1 575 aa15.19■□□□□ 0.02
CHMP2A-201ENST00000312547 MKRN1Q9UHC7 482 aaKnown RBP15.19■□□□□ 0.02
CHMP2A-201ENST00000312547 POTEIP0CG38 1075 aa15.18■□□□□ 0.02
CHMP2A-201ENST00000312547 POTEJP0CG39 1038 aa15.18■□□□□ 0.02
CHMP2A-201ENST00000312547 GNAT2P19087 354 aa15.18■□□□□ 0.02
CHMP2A-201ENST00000312547 CACNB3P54284 484 aa15.18■□□□□ 0.02
CHMP2A-201ENST00000312547 CASC1Q6TDU7 716 aa15.18■□□□□ 0.02
CHMP2A-201ENST00000312547 DDX4Q9NQI0 724 aaKnown RBP15.18■□□□□ 0.02
CHMP2A-201ENST00000312547 TMOD2Q9NZR1 351 aa15.18■□□□□ 0.02
CHMP2A-201ENST00000312547 SLC4A4Q9Y6R1 1079 aa15.18■□□□□ 0.02
CHMP2A-201ENST00000312547 CNTNAP1P78357 1384 aa15.18■□□□□ 0.02
CHMP2A-201ENST00000312547 RPAP1Q9BWH6 1393 aaPredicted RBP15.18■□□□□ 0.02
CHMP2A-201ENST00000312547 AK9Q5TCS8 1911 aa15.17■□□□□ 0.02
CHMP2A-201ENST00000312547 GSG1L2A8MUP6 293 aa15.17■□□□□ 0.02
CHMP2A-201ENST00000312547 ENTPD3O75355 529 aa15.17■□□□□ 0.02
CHMP2A-201ENST00000312547 MFAP1P55081 439 aaKnown RBP15.17■□□□□ 0.02
CHMP2A-201ENST00000312547 EAPPQ56P03 285 aaPredicted RBP15.17■□□□□ 0.02
CHMP2A-201ENST00000312547 FAM83AQ86UY5 434 aa15.17■□□□□ 0.02
CHMP2A-201ENST00000312547 LDHDQ86WU2 507 aa15.17■□□□□ 0.02
CHMP2A-201ENST00000312547 TGFBRAP1Q8WUH2 860 aa15.17■□□□□ 0.02
CHMP2A-201ENST00000312547 SDR42E1Q8WUS8 393 aa15.17■□□□□ 0.02
CHMP2A-201ENST00000312547 VEZTQ9HBM0 779 aa15.17■□□□□ 0.02
CHMP2A-201ENST00000312547 DCP1AQ9NPI6 582 aaPredicted RBP15.17■□□□□ 0.02
CHMP2A-201ENST00000312547 ATP8A2Q9NTI2 1148 aa15.17■□□□□ 0.02
CHMP2A-201ENST00000312547 FLT1P17948 1338 aa15.17■□□□□ 0.02
CHMP2A-201ENST00000312547 PATL2C9JE40 543 aaKnown RBP15.16■□□□□ 0.02
CHMP2A-201ENST00000312547 HSPD1P10809 573 aaKnown RBP15.16■□□□□ 0.02
CHMP2A-201ENST00000312547 C8orf34Q49A92 452 aa15.16■□□□□ 0.02
CHMP2A-201ENST00000312547 VPS53Q5VIR6 699 aa15.16■□□□□ 0.02
CHMP2A-201ENST00000312547 GIMAP6Q6P9H5 292 aa15.16■□□□□ 0.02
CHMP2A-201ENST00000312547 APOBEC3FQ8IUX4 373 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms