RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 TRAF5O00463 557 aa15.33■□□□□ 0.05
CLCN6-201ENST00000312413 ERCC5P28715 1186 aaPredicted RBP15.33■□□□□ 0.05
CLCN6-201ENST00000312413 MRPS9P82933 396 aaKnown RBP15.33■□□□□ 0.05
CLCN6-201ENST00000312413 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.33■□□□□ 0.05
CLCN6-201ENST00000312413 PLIN2Q99541 437 aa15.33■□□□□ 0.05
CLCN6-201ENST00000312413 GMNNO75496 209 aa15.33■□□□□ 0.04
CLCN6-201ENST00000312413 ERCC6LQ2NKX8 1250 aa15.33■□□□□ 0.04
CLCN6-201ENST00000312413 TMTC1Q8IUR5 882 aa15.33■□□□□ 0.04
CLCN6-201ENST00000312413 LINS1Q8NG48 757 aa15.33■□□□□ 0.04
CLCN6-201ENST00000312413 IQSEC3Q9UPP2 1182 aaPredicted RBP15.33■□□□□ 0.04
CLCN6-201ENST00000312413 SOS1Q07889 1333 aaPredicted RBP15.33■□□□□ 0.04
CLCN6-201ENST00000312413 MAGEB6P1A0A0J9YX57 407 aa15.33■□□□□ 0.04
CLCN6-201ENST00000312413 SPOPO43791 374 aa15.33■□□□□ 0.04
CLCN6-201ENST00000312413 SECISBP2LQ93073 1101 aaKnown RBP15.33■□□□□ 0.04
CLCN6-201ENST00000312413 MCUR1Q96AQ8 359 aa15.33■□□□□ 0.04
CLCN6-201ENST00000312413 NOX5Q96PH1 765 aa15.33■□□□□ 0.04
CLCN6-201ENST00000312413 KCNH3Q9ULD8 1083 aa15.33■□□□□ 0.04
CLCN6-201ENST00000312413 UAP1Q16222 522 aaPredicted RBP15.33■□□□□ 0.04
CLCN6-201ENST00000312413 SV2BQ7L1I2 683 aa15.33■□□□□ 0.04
CLCN6-201ENST00000312413 RABEP2Q9H5N1 569 aa15.33■□□□□ 0.04
CLCN6-201ENST00000312413 C14orf93Q9H972 538 aaKnown RBP15.33■□□□□ 0.04
CLCN6-201ENST00000312413 PLCD1P51178 756 aa15.32■□□□□ 0.04
CLCN6-201ENST00000312413 GKAP1Q5VSY0 366 aaPredicted RBP15.32■□□□□ 0.04
CLCN6-201ENST00000312413 CCDC65Q8IXS2 484 aa15.32■□□□□ 0.04
CLCN6-201ENST00000312413 CASQ2O14958 399 aaPredicted RBP15.32■□□□□ 0.04
CLCN6-201ENST00000312413 ANO1Q5XXA6 986 aa15.32■□□□□ 0.04
CLCN6-201ENST00000312413 VCXQ9H320 206 aa15.32■□□□□ 0.04
CLCN6-201ENST00000312413 FAM184BQ9ULE4 1060 aa15.32■□□□□ 0.04
CLCN6-201ENST00000312413 EXOC5O00471 708 aa15.32■□□□□ 0.04
CLCN6-201ENST00000312413 HSPA1LP34931 641 aa15.32■□□□□ 0.04
CLCN6-201ENST00000312413 PAK2Q13177 524 aa15.32■□□□□ 0.04
CLCN6-201ENST00000312413 CCDC38Q502W7 563 aa15.32■□□□□ 0.04
CLCN6-201ENST00000312413 TAOK1Q7L7X3 1001 aa15.32■□□□□ 0.04
CLCN6-201ENST00000312413 PTPN23Q9H3S7 1636 aa15.32■□□□□ 0.04
CLCN6-201ENST00000312413 CEP120Q8N960 986 aa15.32■□□□□ 0.04
CLCN6-201ENST00000312413 MLKLQ8NB16 471 aa15.32■□□□□ 0.04
CLCN6-201ENST00000312413 AMOTL2Q9Y2J4 779 aa15.32■□□□□ 0.04
CLCN6-201ENST00000312413 RXRAP19793 462 aa15.32■□□□□ 0.04
CLCN6-201ENST00000312413 ARHGAP24Q8N264 748 aa15.32■□□□□ 0.04
CLCN6-201ENST00000312413 ARHGEF2Q92974 986 aaKnown RBP15.32■□□□□ 0.04
CLCN6-201ENST00000312413 ASXL1Q8IXJ9 1541 aa15.31■□□□□ 0.04
CLCN6-201ENST00000312413 VAMP4O75379 141 aa15.31■□□□□ 0.04
CLCN6-201ENST00000312413 CPA1P15085 419 aa15.31■□□□□ 0.04
CLCN6-201ENST00000312413 RPS6KB1P23443 525 aa15.31■□□□□ 0.04
CLCN6-201ENST00000312413 NUP58Q9BVL2 599 aa15.31■□□□□ 0.04
CLCN6-201ENST00000312413 RBM28Q9NW13 759 aaKnown RBP15.31■□□□□ 0.04
CLCN6-201ENST00000312413 RNASE9P60153 205 aaKnown RBP15.31■□□□□ 0.04
CLCN6-201ENST00000312413 ZSCAN26Q16670 478 aa15.31■□□□□ 0.04
CLCN6-201ENST00000312413 TMEM87AQ8NBN3 555 aa15.31■□□□□ 0.04
CLCN6-201ENST00000312413 GRIN2AQ12879 1464 aa15.31■□□□□ 0.04
CLCN6-201ENST00000312413 ZNF131P52739 623 aa15.31■□□□□ 0.04
CLCN6-201ENST00000312413 TTLL12Q14166 644 aaPredicted RBP15.31■□□□□ 0.04
CLCN6-201ENST00000312413 ZNF365Q70YC5 407 aa15.31■□□□□ 0.04
CLCN6-201ENST00000312413 VPS52Q8N1B4 723 aa15.31■□□□□ 0.04
CLCN6-201ENST00000312413 LLPHQ9BRT6 129 aaKnown RBP15.31■□□□□ 0.04
CLCN6-201ENST00000312413 ODF2LQ9ULJ1 636 aa15.31■□□□□ 0.04
CLCN6-201ENST00000312413 SYNRGQ9UMZ2 1314 aa15.31■□□□□ 0.04
CLCN6-201ENST00000312413 TNFAIP3P21580 790 aa15.3■□□□□ 0.04
CLCN6-201ENST00000312413 MAP2K2P36507 400 aa15.3■□□□□ 0.04
CLCN6-201ENST00000312413 ZNF174Q15697 407 aa15.3■□□□□ 0.04
CLCN6-201ENST00000312413 ARHGEF11O15085 1522 aa15.3■□□□□ 0.04
CLCN6-201ENST00000312413 EPB41P11171 864 aaKnown RBP15.3■□□□□ 0.04
CLCN6-201ENST00000312413 PDE4DQ08499 809 aa15.3■□□□□ 0.04
CLCN6-201ENST00000312413 SDCCAG8Q86SQ7 713 aaPredicted RBP15.3■□□□□ 0.04
CLCN6-201ENST00000312413 NOS1P29475 1434 aa15.3■□□□□ 0.04
CLCN6-201ENST00000312413 CCDC62Q6P9F0 684 aa15.3■□□□□ 0.04
CLCN6-201ENST00000312413 DPH6Q7L8W6 267 aa15.3■□□□□ 0.04
CLCN6-201ENST00000312413 MAK16Q9BXY0 300 aaKnown RBP15.3■□□□□ 0.04
CLCN6-201ENST00000312413 BCL2L12Q9HB09 334 aa15.3■□□□□ 0.04
CLCN6-201ENST00000312413 FRMD4BQ9Y2L6 1034 aa15.3■□□□□ 0.04
CLCN6-201ENST00000312413 MYCNP04198 464 aaPredicted RBP15.3■□□□□ 0.04
CLCN6-201ENST00000312413 NBPF6Q5VWK0 638 aa15.3■□□□□ 0.04
CLCN6-201ENST00000312413 SEPT14Q6ZU15 432 aa15.3■□□□□ 0.04
CLCN6-201ENST00000312413 SND1Q7KZF4 910 aaKnown RBP eCLIP15.3■□□□□ 0.04
CLCN6-201ENST00000312413 NBPF4Q96M43 638 aa15.3■□□□□ 0.04
CLCN6-201ENST00000312413 PARD3Q8TEW0 1356 aa15.3■□□□□ 0.04
CLCN6-201ENST00000312413 SNX16P57768 344 aa15.3■□□□□ 0.04
CLCN6-201ENST00000312413 SLC9C1Q4G0N8 1177 aa15.3■□□□□ 0.04
CLCN6-201ENST00000312413 CSGALNACT2Q8N6G5 542 aa15.3■□□□□ 0.04
CLCN6-201ENST00000312413 ZNF219Q9P2Y4 722 aaPredicted RBP15.3■□□□□ 0.04
CLCN6-201ENST00000312413 PPFIA4O75335 1185 aa15.29■□□□□ 0.04
CLCN6-201ENST00000312413 RFC1P35251 1148 aaPredicted RBP15.29■□□□□ 0.04
CLCN6-201ENST00000312413 NLRP12P59046 1061 aa15.29■□□□□ 0.04
CLCN6-201ENST00000312413 CNNM4Q6P4Q7 775 aa15.29■□□□□ 0.04
CLCN6-201ENST00000312413 UBL4BQ8N7F7 174 aa15.29■□□□□ 0.04
CLCN6-201ENST00000312413 POLR3AO14802 1390 aaPredicted RBP15.29■□□□□ 0.04
CLCN6-201ENST00000312413 KRT9P35527 623 aa15.29■□□□□ 0.04
CLCN6-201ENST00000312413 KIFAP3Q92845 792 aa15.29■□□□□ 0.04
CLCN6-201ENST00000312413 FAM114A2Q9NRY5 505 aa15.29■□□□□ 0.04
CLCN6-201ENST00000312413 ACEP12821 1306 aa15.29■□□□□ 0.04
CLCN6-201ENST00000312413 MTMR3Q13615 1198 aa15.29■□□□□ 0.04
CLCN6-201ENST00000312413 TRIM31Q9BZY9 425 aa15.29■□□□□ 0.04
CLCN6-201ENST00000312413 HELLSQ9NRZ9 838 aa15.29■□□□□ 0.04
CLCN6-201ENST00000312413 CUTAO60888 179 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 PAK1Q13153 545 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 NAP1L4Q99733 375 aaKnown RBP15.28■□□□□ 0.04
CLCN6-201ENST00000312413 HGSO14964 777 aaPredicted RBP15.28■□□□□ 0.04
CLCN6-201ENST00000312413 ZNF853P0CG23 659 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 FBLN1P23142 703 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 ASIC2Q16515 512 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms