RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 SDF4Q9BRK5 362 aa11.96□□□□□ -0.49
MSRB3-201ENST00000308259 TM6SF1Q9BZW5 370 aa11.96□□□□□ -0.49
MSRB3-201ENST00000308259 TAF5LO75529 589 aa11.96□□□□□ -0.5
MSRB3-201ENST00000308259 NBPF5PQ86XG9 351 aaPredicted RBP11.96□□□□□ -0.5
MSRB3-201ENST00000308259 LEO1Q8WVC0 666 aaPredicted RBP11.96□□□□□ -0.5
MSRB3-201ENST00000308259 PGBD1Q96JS3 809 aa11.96□□□□□ -0.5
MSRB3-201ENST00000308259 NCOA5Q9HCD5 579 aaKnown RBP11.96□□□□□ -0.5
MSRB3-201ENST00000308259 GOPCQ9HD26 462 aa11.96□□□□□ -0.5
MSRB3-201ENST00000308259 DDX21Q9NR30 783 aaKnown RBP eCLIP11.96□□□□□ -0.5
MSRB3-201ENST00000308259 EPB41L2O43491 1005 aaKnown RBP11.95□□□□□ -0.5
MSRB3-201ENST00000308259 EZRP15311 586 aaKnown RBP11.95□□□□□ -0.5
MSRB3-201ENST00000308259 ZNF790Q6PG37 636 aa11.95□□□□□ -0.5
MSRB3-201ENST00000308259 KIF4AO95239 1232 aa11.95□□□□□ -0.5
MSRB3-201ENST00000308259 GCKRQ14397 625 aa11.95□□□□□ -0.5
MSRB3-201ENST00000308259 CCDC85AQ96PX6 553 aaPredicted RBP11.95□□□□□ -0.5
MSRB3-201ENST00000308259 FAN1Q9Y2M0 1017 aa11.95□□□□□ -0.5
MSRB3-201ENST00000308259 CAND2O75155 1236 aa11.95□□□□□ -0.5
MSRB3-201ENST00000308259 BRINP3Q76B58 766 aa11.95□□□□□ -0.5
MSRB3-201ENST00000308259 ARHGEF25Q86VW2 580 aa11.95□□□□□ -0.5
MSRB3-201ENST00000308259 PPP2R3AQ06190 1150 aa11.95□□□□□ -0.5
MSRB3-201ENST00000308259 RBBP5Q15291 538 aaKnown RBP11.95□□□□□ -0.5
MSRB3-201ENST00000308259 RUFY1Q96T51 708 aa11.95□□□□□ -0.5
MSRB3-201ENST00000308259 RGPD2P0DJD1 1756 aa11.94□□□□□ -0.5
MSRB3-201ENST00000308259 G3V3G9 751 aa11.94□□□□□ -0.5
MSRB3-201ENST00000308259 RPSAP08865 295 aaKnown RBP11.94□□□□□ -0.5
MSRB3-201ENST00000308259 DCAF8Q5TAQ9 597 aa11.94□□□□□ -0.5
MSRB3-201ENST00000308259 CCDC73Q6ZRK6 1079 aa11.94□□□□□ -0.5
MSRB3-201ENST00000308259 LRRC8AQ8IWT6 810 aa11.94□□□□□ -0.5
MSRB3-201ENST00000308259 CYP21A2P08686 494 aa11.94□□□□□ -0.5
MSRB3-201ENST00000308259 CCT5P48643 541 aa11.94□□□□□ -0.5
MSRB3-201ENST00000308259 TIMM10P62072 90 aa11.94□□□□□ -0.5
MSRB3-201ENST00000308259 ZNF772Q68DY9 489 aaPredicted RBP11.94□□□□□ -0.5
MSRB3-201ENST00000308259 NUP133Q8WUM0 1156 aa11.94□□□□□ -0.5
MSRB3-201ENST00000308259 NEK1Q96PY6 1258 aa11.94□□□□□ -0.5
MSRB3-201ENST00000308259 PUF60Q9UHX1 559 aaKnown RBP11.94□□□□□ -0.5
MSRB3-201ENST00000308259 ATP2C2O75185 946 aa11.94□□□□□ -0.5
MSRB3-201ENST00000308259 APOBRQ0VD83 1088 aa11.94□□□□□ -0.5
MSRB3-201ENST00000308259 CNNM3Q8NE01 707 aa11.94□□□□□ -0.5
MSRB3-201ENST00000308259 CEP89Q96ST8 783 aa11.94□□□□□ -0.5
MSRB3-201ENST00000308259 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.94□□□□□ -0.5
MSRB3-201ENST00000308259 SH3BP1Q9Y3L3 701 aa11.94□□□□□ -0.5
MSRB3-201ENST00000308259 A0A087WZG4 1122 aa11.93□□□□□ -0.5
MSRB3-201ENST00000308259 AKAP17AQ02040 695 aaKnown RBP11.93□□□□□ -0.5
MSRB3-201ENST00000308259 TNNI3KQ59H18 835 aa11.93□□□□□ -0.5
MSRB3-201ENST00000308259 FOXR1Q6PIV2 292 aa11.93□□□□□ -0.5
MSRB3-201ENST00000308259 MRFAP1L1Q96HT8 127 aa11.93□□□□□ -0.5
MSRB3-201ENST00000308259 USP21Q9UK80 565 aa11.93□□□□□ -0.5
MSRB3-201ENST00000308259 FPGT-TNNI3KV9GXZ4 949 aa11.93□□□□□ -0.5
MSRB3-201ENST00000308259 ANKRD13DQ6ZTN6 518 aa11.93□□□□□ -0.5
MSRB3-201ENST00000308259 KCNB2Q92953 911 aa11.93□□□□□ -0.5
MSRB3-201ENST00000308259 CRACR2AQ9BSW2 395 aa11.93□□□□□ -0.5
MSRB3-201ENST00000308259 MYO6Q9UM54 1294 aa11.93□□□□□ -0.5
MSRB3-201ENST00000308259 IPO7O95373 1038 aaKnown RBP11.93□□□□□ -0.5
MSRB3-201ENST00000308259 RHOXF2BP0C7M4 288 aa11.93□□□□□ -0.5
MSRB3-201ENST00000308259 PAX7P23759 505 aa11.93□□□□□ -0.5
MSRB3-201ENST00000308259 STOX1Q6ZVD7 989 aa11.93□□□□□ -0.5
MSRB3-201ENST00000308259 RPUSD2Q8IZ73 545 aaKnown RBP11.93□□□□□ -0.5
MSRB3-201ENST00000308259 ZNF594Q96JF6 807 aaPredicted RBP11.93□□□□□ -0.5
MSRB3-201ENST00000308259 RHOXF2Q9BQY4 288 aa11.93□□□□□ -0.5
MSRB3-201ENST00000308259 GNL3LQ9NVN8 582 aaKnown RBP11.93□□□□□ -0.5
MSRB3-201ENST00000308259 BIN2Q9UBW5 565 aaPredicted RBP11.93□□□□□ -0.5
MSRB3-201ENST00000308259 KINO60870 393 aaKnown RBP11.93□□□□□ -0.5
MSRB3-201ENST00000308259 GSDMDP57764 484 aa11.93□□□□□ -0.5
MSRB3-201ENST00000308259 OTUD7BQ6GQQ9 843 aa11.93□□□□□ -0.5
MSRB3-201ENST00000308259 GPHNQ9NQX3 736 aaPredicted RBP11.93□□□□□ -0.5
MSRB3-201ENST00000308259 MRFAP1Q9Y605 127 aa11.93□□□□□ -0.5
MSRB3-201ENST00000308259 HIP1O00291 1037 aa11.92□□□□□ -0.5
MSRB3-201ENST00000308259 PDCP20941 246 aa11.92□□□□□ -0.5
MSRB3-201ENST00000308259 PTPN12Q05209 780 aaKnown RBP11.92□□□□□ -0.5
MSRB3-201ENST00000308259 SCRN1Q12765 414 aa11.92□□□□□ -0.5
MSRB3-201ENST00000308259 ORC3Q9UBD5 711 aaPredicted RBP11.92□□□□□ -0.5
MSRB3-201ENST00000308259 TRPC5Q9UL62 973 aaPredicted RBP11.92□□□□□ -0.5
MSRB3-201ENST00000308259 SF3A1Q15459 793 aaKnown RBP11.92□□□□□ -0.5
MSRB3-201ENST00000308259 LMBR1LQ6UX01 489 aa11.92□□□□□ -0.5
MSRB3-201ENST00000308259 ELF1P32519 619 aa11.92□□□□□ -0.5
MSRB3-201ENST00000308259 HDXQ7Z353 690 aa11.92□□□□□ -0.5
MSRB3-201ENST00000308259 KIAA1328Q86T90 577 aa11.92□□□□□ -0.5
MSRB3-201ENST00000308259 CEP57L1Q8IYX8 460 aa11.92□□□□□ -0.5
MSRB3-201ENST00000308259 CCDC12Q8WUD4 166 aaPredicted RBP11.92□□□□□ -0.5
MSRB3-201ENST00000308259 SNRKQ9NRH2 765 aa11.92□□□□□ -0.5
MSRB3-201ENST00000308259 GOLGA1Q92805 767 aa11.91□□□□□ -0.5
MSRB3-201ENST00000308259 ZNF652Q9Y2D9 606 aa11.91□□□□□ -0.5
MSRB3-201ENST00000308259 SLIT1O75093 1534 aa11.91□□□□□ -0.5
MSRB3-201ENST00000308259 TRDNQ13061 729 aa11.91□□□□□ -0.5
MSRB3-201ENST00000308259 E2F5Q15329 346 aa11.91□□□□□ -0.5
MSRB3-201ENST00000308259 SPATA31A3Q5VYP0 1347 aa11.91□□□□□ -0.5
MSRB3-201ENST00000308259 PCDH11XQ9BZA7 1347 aa11.91□□□□□ -0.5
MSRB3-201ENST00000308259 PCDH11YQ9BZA8 1340 aa11.91□□□□□ -0.5
MSRB3-201ENST00000308259 LTN1O94822 1766 aa11.91□□□□□ -0.5
MSRB3-201ENST00000308259 SERPINC1P01008 464 aa11.91□□□□□ -0.5
MSRB3-201ENST00000308259 HAND2P61296 217 aa11.91□□□□□ -0.5
MSRB3-201ENST00000308259 ANKRD1Q15327 319 aa11.91□□□□□ -0.5
MSRB3-201ENST00000308259 CCDC144BQ3MJ40 725 aa11.91□□□□□ -0.5
MSRB3-201ENST00000308259 C11orf57Q6ZUT1 292 aaPredicted RBP11.91□□□□□ -0.5
MSRB3-201ENST00000308259 CCDC144CPQ8IYA2 1237 aa11.91□□□□□ -0.5
MSRB3-201ENST00000308259 METTL22Q9BUU2 404 aaPredicted RBP11.91□□□□□ -0.5
MSRB3-201ENST00000308259 SCAND2PQ9GZW5 306 aaPredicted RBP11.91□□□□□ -0.5
MSRB3-201ENST00000308259 G3BP2Q9UN86 482 aaKnown RBP11.91□□□□□ -0.5
MSRB3-201ENST00000308259 MED23Q9ULK4 1368 aa11.91□□□□□ -0.5
MSRB3-201ENST00000308259 LONRF2Q1L5Z9 754 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms