RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 CLSTN1O94985 981 aa15.31■□□□□ 0.04
SEC23A-201ENST00000307712 LTKP29376 864 aa15.31■□□□□ 0.04
SEC23A-201ENST00000307712 EPS15P42566 896 aa15.31■□□□□ 0.04
SEC23A-201ENST00000307712 NLRP5P59047 1200 aa15.31■□□□□ 0.04
SEC23A-201ENST00000307712 CCZ1BP86790 482 aa15.31■□□□□ 0.04
SEC23A-201ENST00000307712 CCZ1P86791 482 aaPredicted RBP15.31■□□□□ 0.04
SEC23A-201ENST00000307712 IPO4Q8TEX9 1081 aaKnown RBP15.31■□□□□ 0.04
SEC23A-201ENST00000307712 CDR1P51861 262 aa15.31■□□□□ 0.04
SEC23A-201ENST00000307712 POSTNQ15063 836 aa15.31■□□□□ 0.04
SEC23A-201ENST00000307712 STAMQ92783 540 aa15.31■□□□□ 0.04
SEC23A-201ENST00000307712 ADGRB2O60241 1585 aa15.31■□□□□ 0.04
SEC23A-201ENST00000307712 USP6P35125 1406 aa15.31■□□□□ 0.04
SEC23A-201ENST00000307712 ANKRD18BA2A2Z9 1011 aa15.31■□□□□ 0.04
SEC23A-201ENST00000307712 RAD21O60216 631 aa15.31■□□□□ 0.04
SEC23A-201ENST00000307712 TRIM21P19474 475 aaKnown RBP15.31■□□□□ 0.04
SEC23A-201ENST00000307712 ODF2Q5BJF6 829 aa15.31■□□□□ 0.04
SEC23A-201ENST00000307712 AMOTL1Q8IY63 956 aa15.31■□□□□ 0.04
SEC23A-201ENST00000307712 CDK5RAP3Q96JB5 506 aa15.31■□□□□ 0.04
SEC23A-201ENST00000307712 COPRSQ9NQ92 184 aa15.31■□□□□ 0.04
SEC23A-201ENST00000307712 KCNJ14Q9UNX9 436 aa15.31■□□□□ 0.04
SEC23A-201ENST00000307712 CHGBP05060 677 aa15.3■□□□□ 0.04
SEC23A-201ENST00000307712 MTIF2P46199 727 aaKnown RBP15.3■□□□□ 0.04
SEC23A-201ENST00000307712 TTF1Q15361 905 aaPredicted RBP15.3■□□□□ 0.04
SEC23A-201ENST00000307712 ENOX2Q16206 610 aaKnown RBP15.3■□□□□ 0.04
SEC23A-201ENST00000307712 CNGA4Q8IV77 575 aa15.3■□□□□ 0.04
SEC23A-201ENST00000307712 DHX40Q8IX18 779 aaKnown RBP15.3■□□□□ 0.04
SEC23A-201ENST00000307712 NAPGQ99747 312 aaPredicted RBP15.3■□□□□ 0.04
SEC23A-201ENST00000307712 FAM107BQ9H098 131 aa15.3■□□□□ 0.04
SEC23A-201ENST00000307712 PDE11AQ9HCR9 933 aa15.3■□□□□ 0.04
SEC23A-201ENST00000307712 PRDM11Q9NQV5 511 aa15.3■□□□□ 0.04
SEC23A-201ENST00000307712 SERTAD1Q9UHV2 236 aa15.3■□□□□ 0.04
SEC23A-201ENST00000307712 TRMT112Q9UI30 125 aaKnown RBP15.3■□□□□ 0.04
SEC23A-201ENST00000307712 VIRMAQ69YN4 1812 aaKnown RBP15.3■□□□□ 0.04
SEC23A-201ENST00000307712 SLFN14P0C7P3 912 aa15.3■□□□□ 0.04
SEC23A-201ENST00000307712 PAFAH1B1P43034 410 aa15.3■□□□□ 0.04
SEC23A-201ENST00000307712 RNF187Q5TA31 235 aaPredicted RBP15.3■□□□□ 0.04
SEC23A-201ENST00000307712 KRT28Q7Z3Y7 464 aa15.3■□□□□ 0.04
SEC23A-201ENST00000307712 TRIM47Q96LD4 638 aa15.3■□□□□ 0.04
SEC23A-201ENST00000307712 MAPK8IP1Q9UQF2 711 aa15.3■□□□□ 0.04
SEC23A-201ENST00000307712 LONRF2Q1L5Z9 754 aa15.3■□□□□ 0.04
SEC23A-201ENST00000307712 E4F1Q66K89 784 aaPredicted RBP15.3■□□□□ 0.04
SEC23A-201ENST00000307712 APPBP2Q92624 585 aa15.3■□□□□ 0.04
SEC23A-201ENST00000307712 PPRC1Q5VV67 1664 aaKnown RBP15.3■□□□□ 0.04
SEC23A-201ENST00000307712 FGAP02671 866 aa15.29■□□□□ 0.04
SEC23A-201ENST00000307712 HELBQ8NG08 1087 aaPredicted RBP15.29■□□□□ 0.04
SEC23A-201ENST00000307712 CTCFLQ8NI51 663 aaPredicted RBP15.29■□□□□ 0.04
SEC23A-201ENST00000307712 PARD6BQ9BYG5 372 aa15.29■□□□□ 0.04
SEC23A-201ENST00000307712 USO1O60763 962 aaKnown RBP15.29■□□□□ 0.04
SEC23A-201ENST00000307712 PTPRMP28827 1452 aa15.29■□□□□ 0.04
SEC23A-201ENST00000307712 UBXN1Q04323 297 aa15.29■□□□□ 0.04
SEC23A-201ENST00000307712 ARMCX5Q6P1M9 558 aa15.29■□□□□ 0.04
SEC23A-201ENST00000307712 OSBPL5Q9H0X9 879 aaPredicted RBP15.29■□□□□ 0.04
SEC23A-201ENST00000307712 PHLPP2Q6ZVD8 1323 aa15.29■□□□□ 0.04
SEC23A-201ENST00000307712 SPAG1Q07617 926 aa15.29■□□□□ 0.04
SEC23A-201ENST00000307712 RABGGTAQ92696 567 aa15.29■□□□□ 0.04
SEC23A-201ENST00000307712 XAGE2Q96GT9 111 aa15.29■□□□□ 0.04
SEC23A-201ENST00000307712 AIFM3Q96NN9 605 aa15.29■□□□□ 0.04
SEC23A-201ENST00000307712 RNF41Q9H4P4 317 aaPredicted RBP15.29■□□□□ 0.04
SEC23A-201ENST00000307712 ZAP70P43403 619 aa15.28■□□□□ 0.04
SEC23A-201ENST00000307712 BRD3Q15059 726 aa15.28■□□□□ 0.04
SEC23A-201ENST00000307712 EPHA10Q5JZY3 1008 aa15.28■□□□□ 0.04
SEC23A-201ENST00000307712 IQCA1Q86XH1 822 aa15.28■□□□□ 0.04
SEC23A-201ENST00000307712 FMR1NBQ8N0W7 255 aaPredicted RBP15.28■□□□□ 0.04
SEC23A-201ENST00000307712 SLF1Q9BQI6 1058 aa15.28■□□□□ 0.04
SEC23A-201ENST00000307712 POLR3EQ9NVU0 708 aa15.28■□□□□ 0.04
SEC23A-201ENST00000307712 SLC39A14Q15043 492 aa15.28■□□□□ 0.04
SEC23A-201ENST00000307712 CATIPQ7Z7H3 387 aa15.28■□□□□ 0.04
SEC23A-201ENST00000307712 IKBKBO14920 756 aa15.28■□□□□ 0.04
SEC23A-201ENST00000307712 FKBP15Q5T1M5 1219 aa15.28■□□□□ 0.04
SEC23A-201ENST00000307712 IQSEC3Q9UPP2 1182 aaPredicted RBP15.28■□□□□ 0.04
SEC23A-201ENST00000307712 SHPRHQ149N8 1683 aa15.28■□□□□ 0.04
SEC23A-201ENST00000307712 RILPL1Q5EBL4 403 aa15.28■□□□□ 0.04
SEC23A-201ENST00000307712 CCDC122Q5T0U0 273 aa15.28■□□□□ 0.04
SEC23A-201ENST00000307712 EBAG9O00559 213 aa15.27■□□□□ 0.04
SEC23A-201ENST00000307712 STX10O60499 249 aa15.27■□□□□ 0.04
SEC23A-201ENST00000307712 SSBP05455 408 aaKnown RBP eCLIP15.27■□□□□ 0.04
SEC23A-201ENST00000307712 KRT9P35527 623 aa15.27■□□□□ 0.04
SEC23A-201ENST00000307712 IRX3P78415 501 aaPredicted RBP15.27■□□□□ 0.04
SEC23A-201ENST00000307712 LRRC24Q50LG9 513 aa15.27■□□□□ 0.04
SEC23A-201ENST00000307712 UBA7P41226 1012 aa15.27■□□□□ 0.03
SEC23A-201ENST00000307712 CKAP4Q07065 602 aaKnown RBP15.27■□□□□ 0.03
SEC23A-201ENST00000307712 TDRD12Q587J7 1177 aaKnown RBP15.27■□□□□ 0.03
SEC23A-201ENST00000307712 FAM89AQ96GI7 184 aa15.27■□□□□ 0.03
SEC23A-201ENST00000307712 GNL3LQ9NVN8 582 aaKnown RBP15.27■□□□□ 0.03
SEC23A-201ENST00000307712 VWA3AA6NCI4 1184 aa15.27■□□□□ 0.03
SEC23A-201ENST00000307712 TUBB4BP68371 445 aa15.27■□□□□ 0.03
SEC23A-201ENST00000307712 PTPN12Q05209 780 aaKnown RBP15.27■□□□□ 0.03
SEC23A-201ENST00000307712 CCDC96Q2M329 555 aa15.27■□□□□ 0.03
SEC23A-201ENST00000307712 ZMYM1Q5SVZ6 1142 aa15.27■□□□□ 0.03
SEC23A-201ENST00000307712 PLBD2Q8NHP8 589 aa15.27■□□□□ 0.03
SEC23A-201ENST00000307712 KRT23Q9C075 422 aa15.27■□□□□ 0.03
SEC23A-201ENST00000307712 LUC7L2Q9Y383 392 aaKnown RBP15.27■□□□□ 0.03
SEC23A-201ENST00000307712 TBX22Q9Y458 520 aa15.27■□□□□ 0.03
SEC23A-201ENST00000307712 TMEM232C9JQI7 657 aa15.26■□□□□ 0.03
SEC23A-201ENST00000307712 AKR1B10O60218 316 aa15.26■□□□□ 0.03
SEC23A-201ENST00000307712 IRX5P78411 483 aaPredicted RBP15.26■□□□□ 0.03
SEC23A-201ENST00000307712 ZNF174Q15697 407 aa15.26■□□□□ 0.03
SEC23A-201ENST00000307712 CACNA2D4Q7Z3S7 1137 aa15.26■□□□□ 0.03
SEC23A-201ENST00000307712 ZHX3Q9H4I2 956 aa15.26■□□□□ 0.03
SEC23A-201ENST00000307712 LUC7LQ9NQ29 371 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms