RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 CYP46A1Q9Y6A2 500 aa15.28■□□□□ 0.04
SHANK2-AS3-201ENST00000307548 LDHBP07195 334 aaKnown RBP15.27■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 VIL1P09327 827 aaKnown RBP15.27■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 LMNB1P20700 586 aa15.27■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 CASTP20810 708 aaKnown RBP15.27■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 ADGRA1Q86SQ6 560 aa15.27■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 UPF3BQ9BZI7 483 aaKnown RBP15.27■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 FZD9O00144 591 aa15.26■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 MBD4O95243 580 aa15.26■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 HMGB1P09429 215 aaKnown RBP15.26■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 CXCL9Q07325 125 aa15.26■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 IMMTQ16891 758 aaKnown RBP15.26■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 JDP2Q8WYK2 163 aa15.26■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 GMLQ99445 158 aa15.26■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 RIOK1Q9BRS2 568 aaKnown RBP15.26■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 DICER1Q9UPY3 1922 aaKnown RBP15.26■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 CCDC88AQ3V6T2 1871 aa15.26■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 RAD17O75943 681 aa15.25■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 GSTO1P78417 241 aa15.25■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 NEK1Q96PY6 1258 aa15.25■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 MAGEB6P1A0A0J9YX57 407 aa15.25■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 GSG1L2A8MUP6 293 aa15.25■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 PSMD14O00487 310 aa15.25■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 LDHCP07864 332 aa15.25■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 RPS6KB1P23443 525 aa15.25■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 GIMAP6Q6P9H5 292 aa15.25■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 RSBN1LQ6PCB5 846 aaPredicted RBP15.25■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 BLOC1S2Q6QNY1 142 aa15.25■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 DZIP1Q86YF9 867 aaKnown RBP15.25■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 FBXW7Q969H0 707 aa15.25■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 FAM163AQ96GL9 167 aaPredicted RBP15.25■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 ARMT1Q9H993 441 aa15.25■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 PDRG1Q9NUG6 133 aa15.25■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 TAF6LQ9Y6J9 622 aa15.25■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 PPP4CP60510 307 aa15.24■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 CUL4AQ13619 759 aa15.24■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 DIXDC1Q155Q3 683 aa15.24■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 GPR162Q16538 588 aa15.24■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 CERS3Q8IU89 383 aa15.24■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 IFNL3Q8IZI9 196 aa15.24■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 LCORLQ8N3X6 602 aa15.24■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 NACAP1Q9BZK3 213 aa15.24■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 GAKO14976 1311 aa15.24■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 MYO3BQ8WXR4 1341 aa15.24■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 E7EWF7 191 aa15.23■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 ZNF213O14771 459 aa15.23■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 DDIT3P35638 169 aa15.23■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 ANKRD1Q15327 319 aa15.23■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 CIAPIN1Q6FI81 312 aa15.23■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 STOX1Q6ZVD7 989 aa15.23■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 TMX3Q96JJ7 454 aa15.23■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 LIMCH1Q9UPQ0 1083 aa15.23■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 GRIN3BO60391 1043 aa15.22■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 APPP05067 770 aa15.22■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 AK2P54819 239 aa15.22■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 SLF2Q8IX21 1173 aa15.22■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 FBXL16Q8N461 479 aa15.22■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 MIGA1Q8NAN2 632 aa15.22■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 ZSCAN31Q96LW9 406 aaPredicted RBP15.22■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 MRIQ9BWK5 157 aa15.22■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 EPB41L4AQ9HCS5 686 aaPredicted RBP15.22■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 TTF2Q9UNY4 1162 aaKnown RBP15.22■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 SLC4A4Q9Y6R1 1079 aa15.22■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 MROH7-TTC4A0A0A0MT08 1334 aa15.22■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 ZNF541Q9H0D2 1346 aa15.22■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 HDLBPQ00341 1268 aaKnown RBP15.22■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 EXOSC10Q01780 885 aaKnown RBP15.22■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 DHX32Q7L7V1 743 aaKnown RBP15.22■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 KIAA0825Q8IV33 1275 aa15.22■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 AGBL3Q8NEM8 1001 aa15.22■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 INTS4Q96HW7 963 aaKnown RBP15.22■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 TIAM2Q8IVF5 1701 aa15.21■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 MYH2Q9UKX2 1941 aa15.21■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 GPR75-ASB3A0A0A6YYF3 556 aa15.21■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 F8W031 263 aaPredicted RBP15.21■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 CPA1P15085 419 aa15.21■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 TNIP1Q15025 636 aa15.21■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 HHIPL2Q6UWX4 724 aa15.21■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 AGXT2Q9BYV1 514 aa15.21■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 NAPBQ9H115 298 aa15.21■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 CWC22Q9HCG8 908 aaKnown RBP15.21■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 CIZ1Q9ULV3 898 aaPredicted RBP15.21■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 ZBTB12Q9Y330 459 aaPredicted RBP15.21■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 DAGLAQ9Y4D2 1042 aa15.21■□□□□ 0.03
SHANK2-AS3-201ENST00000307548 WDR19Q8NEZ3 1342 aa15.21■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 ADAMTSL1Q8N6G6 1762 aa15.21■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 PRKAB2O43741 272 aa15.2■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 EIF6P56537 245 aaKnown RBP15.2■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 DYNLL1P63167 89 aaKnown RBP15.2■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 C9orf131Q5VYM1 1079 aa15.2■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 CRNKL1Q9BZJ0 848 aaKnown RBP15.2■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 SH2B1Q9NRF2 756 aaPredicted RBP15.2■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 ATP8A2Q9NTI2 1148 aa15.2■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 RNF181Q9P0P0 153 aa15.2■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 ANAPC4Q9UJX5 808 aa15.2■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 BAG3O95817 575 aa15.19■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 SCNN1DP51172 638 aa15.19■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 HSP90AA1P07900 732 aaKnown RBP15.19■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 RPS12P25398 132 aaKnown RBP15.19■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 CRKP46108 304 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms