RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 ZPR1O75312 459 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 SLU7O95391 586 aaKnown RBP4.52□□□□□ -1.69
USH2A-201ENST00000307340 SETDB1Q15047 1291 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 APBB1O00213 710 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 EIF3BP55884 814 aaKnown RBP4.52□□□□□ -1.69
USH2A-201ENST00000307340 BIRC2Q13490 618 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 NBPF6Q5VWK0 638 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 NBPF4Q96M43 638 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 UQCRHLA0A096LP55 91 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 PABPN1LA6NDY0 278 aaKnown RBP4.52□□□□□ -1.69
USH2A-201ENST00000307340 ZNF500O60304 480 aaPredicted RBP4.52□□□□□ -1.69
USH2A-201ENST00000307340 DEXIO95424 95 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 UQCRHP07919 91 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 ST5P78524 1137 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 HSP90AA5PQ58FG0 334 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 GRK7Q8WTQ7 553 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 ZNF277Q9NRM2 450 aaPredicted RBP4.52□□□□□ -1.69
USH2A-201ENST00000307340 PZPP20742 1482 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 SMC6Q96SB8 1091 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 CTAGE15A4D2H0 777 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 CTAGE8P0CG41 777 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 CTAGE6Q86UF2 777 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 CTAGE4Q8IX94 777 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 ZMYM2Q9UBW7 1377 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 KRT26Q7Z3Y9 468 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 NEUROD6Q96NK8 337 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 AP3B1O00203 1094 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 TDO2P48775 406 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 JPH2Q9BR39 696 aaPredicted RBP4.51□□□□□ -1.69
USH2A-201ENST00000307340 LRP2BPQ9P2M1 347 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 CYP26C1Q6V0L0 522 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 TRIM42Q8IWZ5 723 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 MORC2Q9Y6X9 1032 aaPredicted RBP4.51□□□□□ -1.69
USH2A-201ENST00000307340 MADDQ8WXG6 1647 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 DHX32Q7L7V1 743 aaKnown RBP4.51□□□□□ -1.69
USH2A-201ENST00000307340 MXD3Q9BW11 206 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 OSBPL3Q9H4L5 887 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 KIF1AQ12756 1690 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 A0A0G2JS52 829 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 ELOA2Q8IYF1 753 aaPredicted RBP4.51□□□□□ -1.69
USH2A-201ENST00000307340 EXOC1Q9NV70 894 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 PPFIA2O75334 1257 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 NUDT16Q96DE0 195 aaKnown RBP4.51□□□□□ -1.69
USH2A-201ENST00000307340 FAM43BQ6ZT52 329 aaPredicted RBP4.51□□□□□ -1.69
USH2A-201ENST00000307340 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.51□□□□□ -1.69
USH2A-201ENST00000307340 EXOC7Q9UPT5 735 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 STK10O94804 968 aaKnown RBP4.51□□□□□ -1.69
USH2A-201ENST00000307340 ZNF853P0CG23 659 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 ATP11AP98196 1134 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 GLE1Q53GS7 698 aaKnown RBP4.51□□□□□ -1.69
USH2A-201ENST00000307340 CACNA2D3Q8IZS8 1091 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 ZNF444Q8N0Y2 327 aaPredicted RBP4.51□□□□□ -1.69
USH2A-201ENST00000307340 HAUS8Q9BT25 410 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 Q9H521 79 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 UTP11Q9Y3A2 253 aaKnown RBP4.51□□□□□ -1.69
USH2A-201ENST00000307340 UBASH3AP57075 661 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 MBD5Q9P267 1494 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 LMNB1P20700 586 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 ERO1AQ96HE7 468 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 ANKRD27Q96NW4 1050 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 MAF1Q9H063 256 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 NOC2LQ9Y3T9 749 aaKnown RBP4.51□□□□□ -1.69
USH2A-201ENST00000307340 PTPRKQ15262 1439 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 KAT6AQ92794 2004 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 E2F5Q15329 346 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 GLI2P10070 1586 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 TNNT1P13805 278 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 IGBP1P78318 339 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 MEX3CQ5U5Q3 659 aaKnown RBP4.51□□□□□ -1.69
USH2A-201ENST00000307340 C19orf44Q9H6X5 657 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 SAMD15Q9P1V8 674 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 TBX22Q9Y458 520 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 NCOA3Q9Y6Q9 1424 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 EFCAB8A8MWE9 144 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 DNAJC8O75937 253 aaPredicted RBP4.51□□□□□ -1.69
USH2A-201ENST00000307340 ITIH3Q06033 890 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 BRDTQ58F21 947 aaPredicted RBP4.51□□□□□ -1.69
USH2A-201ENST00000307340 NOL8Q76FK4 1167 aaKnown RBP4.51□□□□□ -1.69
USH2A-201ENST00000307340 MYH3P11055 1940 aa4.51□□□□□ -1.69
USH2A-201ENST00000307340 C3orf20Q8ND61 904 aa4.5□□□□□ -1.69
USH2A-201ENST00000307340 IQCGQ9H095 443 aaKnown RBP4.5□□□□□ -1.69
USH2A-201ENST00000307340 MYH9P35579 1960 aaKnown RBP4.5□□□□□ -1.69
USH2A-201ENST00000307340 GMNNO75496 209 aa4.5□□□□□ -1.69
USH2A-201ENST00000307340 SYKP43405 635 aa4.5□□□□□ -1.69
USH2A-201ENST00000307340 KRT39Q6A163 491 aa4.5□□□□□ -1.69
USH2A-201ENST00000307340 RUFY3Q7L099 469 aa4.5□□□□□ -1.69
USH2A-201ENST00000307340 PIP4K2CQ8TBX8 421 aa4.5□□□□□ -1.69
USH2A-201ENST00000307340 JAKMIP1Q96N16 626 aaKnown RBP4.5□□□□□ -1.69
USH2A-201ENST00000307340 SSX2IPQ9Y2D8 614 aa4.5□□□□□ -1.69
USH2A-201ENST00000307340 ADGRB3O60242 1522 aa4.5□□□□□ -1.69
USH2A-201ENST00000307340 HOXB6P17509 224 aaKnown RBP4.5□□□□□ -1.69
USH2A-201ENST00000307340 ZNF274Q96GC6 653 aaPredicted RBP4.5□□□□□ -1.69
USH2A-201ENST00000307340 NOX5Q96PH1 765 aa4.5□□□□□ -1.69
USH2A-201ENST00000307340 KDM6BO15054 1643 aa4.5□□□□□ -1.69
USH2A-201ENST00000307340 MINK1Q8N4C8 1332 aaPredicted RBP4.5□□□□□ -1.69
USH2A-201ENST00000307340 TSNAXIP1Q2TAA8 658 aa4.5□□□□□ -1.69
USH2A-201ENST00000307340 CCDC65Q8IXS2 484 aa4.5□□□□□ -1.69
USH2A-201ENST00000307340 VPS37BQ9H9H4 285 aa4.5□□□□□ -1.69
USH2A-201ENST00000307340 SMAPO00193 183 aa4.5□□□□□ -1.69
USH2A-201ENST00000307340 CAPN15O75808 1086 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms