RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 RGS17Q9UGC6 210 aaPredicted RBP16.83■□□□□ 0.29
PTPN9-201ENST00000306726 ERCC3P19447 782 aa16.83■□□□□ 0.28
PTPN9-201ENST00000306726 TTLL7Q6ZT98 887 aa16.83■□□□□ 0.28
PTPN9-201ENST00000306726 ZNF397Q8NF99 534 aaPredicted RBP16.83■□□□□ 0.28
PTPN9-201ENST00000306726 SLC26A6Q9BXS9 759 aa16.83■□□□□ 0.28
PTPN9-201ENST00000306726 CTNNA3Q9UI47 895 aa16.83■□□□□ 0.28
PTPN9-201ENST00000306726 ZNF202O95125 648 aa16.83■□□□□ 0.28
PTPN9-201ENST00000306726 SYNE4Q8N205 404 aa16.83■□□□□ 0.28
PTPN9-201ENST00000306726 NSUN7Q8NE18 718 aaKnown RBP16.83■□□□□ 0.28
PTPN9-201ENST00000306726 NEURL1BA8MQ27 555 aa16.82■□□□□ 0.28
PTPN9-201ENST00000306726 DNA2P51530 1060 aa16.82■□□□□ 0.28
PTPN9-201ENST00000306726 SRRTQ9BXP5 876 aaKnown RBP16.82■□□□□ 0.28
PTPN9-201ENST00000306726 PALLDQ8WX93 1383 aa16.82■□□□□ 0.28
PTPN9-201ENST00000306726 SBF2Q86WG5 1849 aa16.82■□□□□ 0.28
PTPN9-201ENST00000306726 ADCY9O60503 1353 aa16.82■□□□□ 0.28
PTPN9-201ENST00000306726 ADORA1P30542 326 aa16.82■□□□□ 0.28
PTPN9-201ENST00000306726 KAZALD1Q96I82 304 aa16.82■□□□□ 0.28
PTPN9-201ENST00000306726 ALG1Q9BT22 464 aa16.82■□□□□ 0.28
PTPN9-201ENST00000306726 TMEM232C9JQI7 657 aa16.82■□□□□ 0.28
PTPN9-201ENST00000306726 RHOXF2BP0C7M4 288 aa16.82■□□□□ 0.28
PTPN9-201ENST00000306726 CASP1P29466 404 aa16.82■□□□□ 0.28
PTPN9-201ENST00000306726 MTX1Q13505 466 aa16.82■□□□□ 0.28
PTPN9-201ENST00000306726 IMMTQ16891 758 aaKnown RBP16.82■□□□□ 0.28
PTPN9-201ENST00000306726 CCDC158Q5M9N0 1113 aa16.82■□□□□ 0.28
PTPN9-201ENST00000306726 POTEAQ6S8J7 498 aa16.82■□□□□ 0.28
PTPN9-201ENST00000306726 RHOXF2Q9BQY4 288 aa16.82■□□□□ 0.28
PTPN9-201ENST00000306726 ZNF213O14771 459 aa16.81■□□□□ 0.28
PTPN9-201ENST00000306726 CCDC12Q8WUD4 166 aaPredicted RBP16.81■□□□□ 0.28
PTPN9-201ENST00000306726 IRX2Q9BZI1 471 aaPredicted RBP16.81■□□□□ 0.28
PTPN9-201ENST00000306726 ZSCAN16Q9H4T2 348 aaPredicted RBP16.81■□□□□ 0.28
PTPN9-201ENST00000306726 ARGLU1Q9NWB6 273 aaPredicted RBP16.81■□□□□ 0.28
PTPN9-201ENST00000306726 KCNJ14Q9UNX9 436 aa16.81■□□□□ 0.28
PTPN9-201ENST00000306726 MINDY4BA8MYZ0 360 aa16.81■□□□□ 0.28
PTPN9-201ENST00000306726 FANCCQ00597 558 aa16.81■□□□□ 0.28
PTPN9-201ENST00000306726 TDRD7Q8NHU6 1098 aaKnown RBP16.81■□□□□ 0.28
PTPN9-201ENST00000306726 TM6SF1Q9BZW5 370 aa16.81■□□□□ 0.28
PTPN9-201ENST00000306726 RGPD3A6NKT7 1758 aaPredicted RBP16.81■□□□□ 0.28
PTPN9-201ENST00000306726 RGPD4Q7Z3J3 1758 aa16.81■□□□□ 0.28
PTPN9-201ENST00000306726 A0A1B0GUL7 405 aa16.81■□□□□ 0.28
PTPN9-201ENST00000306726 B4E1Z4 1266 aa16.81■□□□□ 0.28
PTPN9-201ENST00000306726 CCDC102AQ96A19 550 aa16.81■□□□□ 0.28
PTPN9-201ENST00000306726 DDX21Q9NR30 783 aaKnown RBP eCLIP16.81■□□□□ 0.28
PTPN9-201ENST00000306726 ALDH1L1O75891 902 aa16.8■□□□□ 0.28
PTPN9-201ENST00000306726 DHX8Q14562 1220 aaKnown RBP16.8■□□□□ 0.28
PTPN9-201ENST00000306726 ACSBG1Q96GR2 724 aa16.8■□□□□ 0.28
PTPN9-201ENST00000306726 FOXN1O15353 648 aa16.8■□□□□ 0.28
PTPN9-201ENST00000306726 DPF2Q92785 391 aa16.8■□□□□ 0.28
PTPN9-201ENST00000306726 PLEKHA4Q9H4M7 779 aa16.8■□□□□ 0.28
PTPN9-201ENST00000306726 BTAF1O14981 1849 aa16.8■□□□□ 0.28
PTPN9-201ENST00000306726 EVCP57679 992 aa16.8■□□□□ 0.28
PTPN9-201ENST00000306726 METTL24Q5JXM2 366 aa16.8■□□□□ 0.28
PTPN9-201ENST00000306726 CPLX2Q6PUV4 134 aaKnown RBP16.8■□□□□ 0.28
PTPN9-201ENST00000306726 FANCLQ9NW38 375 aa16.8■□□□□ 0.28
PTPN9-201ENST00000306726 HSPD1P10809 573 aaKnown RBP16.79■□□□□ 0.28
PTPN9-201ENST00000306726 SLC27A3Q5K4L6 730 aa16.79■□□□□ 0.28
PTPN9-201ENST00000306726 WWC2Q6AWC2 1192 aa16.79■□□□□ 0.28
PTPN9-201ENST00000306726 PCMTD1Q96MG8 357 aaPredicted RBP16.79■□□□□ 0.28
PTPN9-201ENST00000306726 HMG20BQ9P0W2 317 aa16.79■□□□□ 0.28
PTPN9-201ENST00000306726 PXDNLA1KZ92 1463 aa16.79■□□□□ 0.28
PTPN9-201ENST00000306726 PDIA3P30101 505 aaKnown RBP16.79■□□□□ 0.28
PTPN9-201ENST00000306726 C10orf67Q8IYJ2 551 aa16.79■□□□□ 0.28
PTPN9-201ENST00000306726 ABCF2Q9UG63 623 aa16.79■□□□□ 0.28
PTPN9-201ENST00000306726 C5P01031 1676 aa16.79■□□□□ 0.28
PTPN9-201ENST00000306726 PLA2G4DQ86XP0 818 aa16.79■□□□□ 0.28
PTPN9-201ENST00000306726 ASAP1Q9ULH1 1129 aa16.79■□□□□ 0.28
PTPN9-201ENST00000306726 PLIN2Q99541 437 aa16.78■□□□□ 0.28
PTPN9-201ENST00000306726 CCDC66A2RUB6 948 aa16.78■□□□□ 0.28
PTPN9-201ENST00000306726 AOX1Q06278 1338 aa16.78■□□□□ 0.28
PTPN9-201ENST00000306726 RGL2O15211 777 aa16.78■□□□□ 0.28
PTPN9-201ENST00000306726 TFRCP02786 760 aaKnown RBP16.78■□□□□ 0.28
PTPN9-201ENST00000306726 SLC9C2Q5TAH2 1124 aa16.78■□□□□ 0.28
PTPN9-201ENST00000306726 SMYD4Q8IYR2 804 aaPredicted RBP16.78■□□□□ 0.28
PTPN9-201ENST00000306726 PPP1R13BQ96KQ4 1090 aa16.78■□□□□ 0.28
PTPN9-201ENST00000306726 TRIM34Q9BYJ4 488 aa16.78■□□□□ 0.28
PTPN9-201ENST00000306726 JAG2Q9Y219 1238 aa16.78■□□□□ 0.28
PTPN9-201ENST00000306726 LOC102724428A0A0B4J2F2 783 aa16.77■□□□□ 0.28
PTPN9-201ENST00000306726 PFKFB1P16118 471 aa16.77■□□□□ 0.28
PTPN9-201ENST00000306726 ZAP70P43403 619 aa16.77■□□□□ 0.28
PTPN9-201ENST00000306726 SIK1P57059 783 aa16.77■□□□□ 0.28
PTPN9-201ENST00000306726 MIGA1Q8NAN2 632 aa16.77■□□□□ 0.28
PTPN9-201ENST00000306726 CASQ1P31415 396 aa16.77■□□□□ 0.28
PTPN9-201ENST00000306726 METAP2P50579 478 aaKnown RBP eCLIP16.77■□□□□ 0.28
PTPN9-201ENST00000306726 PTPN12Q05209 780 aaKnown RBP16.77■□□□□ 0.28
PTPN9-201ENST00000306726 KIF4BQ2VIQ3 1234 aa16.77■□□□□ 0.28
PTPN9-201ENST00000306726 FEZ1Q99689 392 aa16.77■□□□□ 0.28
PTPN9-201ENST00000306726 KIAA1468Q9P260 1216 aa16.77■□□□□ 0.28
PTPN9-201ENST00000306726 M0R2C6 588 aa16.77■□□□□ 0.27
PTPN9-201ENST00000306726 IQCB1Q15051 598 aa16.77■□□□□ 0.27
PTPN9-201ENST00000306726 CCDC125Q86Z20 511 aa16.77■□□□□ 0.27
PTPN9-201ENST00000306726 LY75O60449 1722 aa16.77■□□□□ 0.27
PTPN9-201ENST00000306726 OSBP2Q969R2 916 aa16.76■□□□□ 0.27
PTPN9-201ENST00000306726 IFIT3O14879 490 aaKnown RBP16.76■□□□□ 0.27
PTPN9-201ENST00000306726 CCT6AP40227 531 aaKnown RBP16.76■□□□□ 0.27
PTPN9-201ENST00000306726 CLCN6P51797 869 aa16.76■□□□□ 0.27
PTPN9-201ENST00000306726 AKAP17AQ02040 695 aaKnown RBP16.76■□□□□ 0.27
PTPN9-201ENST00000306726 RC3H1Q5TC82 1133 aaKnown RBP16.76■□□□□ 0.27
PTPN9-201ENST00000306726 DHX40Q8IX18 779 aaKnown RBP16.76■□□□□ 0.27
PTPN9-201ENST00000306726 KBTBD3Q8NAB2 608 aa16.76■□□□□ 0.27
PTPN9-201ENST00000306726 RAI14Q9P0K7 980 aa16.76■□□□□ 0.27
PTPN9-201ENST00000306726 TJP1Q07157 1748 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms