RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ABT1Q9ULW3 272 aaKnown RBP13.36□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 SCAF8Q9UPN6 1271 aaKnown RBP13.36□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 NAV1Q8NEY1 1877 aa13.36□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 MYH1P12882 1939 aa13.35□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 TCP10L2B9ZVM9 353 aa13.35□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 GLRX3O76003 335 aaKnown RBP13.35□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 APOBEC3HQ6NTF7 200 aaKnown RBP13.35□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.35□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 DEFB129Q9H1M3 183 aa13.35□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 ANTXR1Q9H6X2 564 aa13.35□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 BAG3O95817 575 aa13.34□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 FMR1Q06787 632 aaKnown RBP eCLIP13.34□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 TSHZ3Q63HK5 1081 aa13.34□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 TMED8Q6PL24 325 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 CHD1LQ86WJ1 897 aa13.34□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 MAGEB6Q8N7X4 407 aa13.34□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 C2orf69Q8N8R5 385 aa13.34□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 FAM163AQ96GL9 167 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 GBA2Q9HCG7 927 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 USP40Q9NVE5 1235 aa13.34□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 OTOFQ9HC10 1997 aa13.34□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 AOX1Q06278 1338 aa13.34□□□□□ -0.27
CSPG4P1Y-201ENST00000306641 PLCG2P16885 1265 aa13.33□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 CYP7A1P22680 504 aa13.33□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 CACNB3P54284 484 aa13.33□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 NUCB1Q02818 461 aa13.33□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 TTLL12Q14166 644 aaPredicted RBP13.33□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 RASA3Q14644 834 aa13.33□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 FKBP1CQ5VVH2 108 aa13.33□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 CDC42EP5Q6NZY7 148 aa13.33□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 CERS3Q8IU89 383 aa13.33□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 RPAP1Q9BWH6 1393 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 GPR75-ASB3A0A0A6YYF3 556 aa13.32□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 MAP4K4O95819 1239 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 LRRFIP1Q32MZ4 808 aaKnown RBP13.32□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 SUPT20HL1Q3ZLR7 823 aa13.32□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 PRAMEF18Q5VWM3 479 aa13.32□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 ZSCAN25Q6NSZ9 544 aa13.32□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 DLK2Q6UY11 383 aa13.32□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 PAXIP1Q6ZW49 1069 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 FAM83AQ86UY5 434 aa13.32□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 OTUD7AQ8TE49 926 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 ZNF384Q8TF68 577 aa13.32□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 HOOK2Q96ED9 719 aa13.32□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 EDC3Q96F86 508 aaKnown RBP13.32□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 AATFQ9NY61 560 aaKnown RBP eCLIP13.32□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 MYH8P13535 1937 aa13.31□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 PDE6AP16499 860 aa13.31□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 PDE1AP54750 535 aa13.31□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 FKBP1BP68106 108 aa13.31□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 HTRA3P83110 453 aa13.31□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 TCP10Q12799 353 aa13.31□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 PICALMQ13492 652 aa13.31□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 SLC9C2Q5TAH2 1124 aa13.31□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 CST9Q5W186 159 aa13.31□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 ARMC9Q7Z3E5 817 aa13.31□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 TEX11Q8IYF3 940 aa13.31□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 PI4K2BQ8TCG2 481 aa13.31□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 TMEM39BQ9GZU3 492 aa13.31□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 TLL2Q9Y6L7 1015 aa13.31□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 SALL3Q9BXA9 1300 aa13.31□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 PPP1R12BO60237 982 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 ZSCAN29Q8IWY8 852 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 FAM151AQ8WW52 585 aa13.3□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 IDI2Q9BXS1 227 aa13.3□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 ZNF532Q9HCE3 1301 aa13.3□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 CNTNAP1P78357 1384 aa13.3□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 RFX7Q2KHR2 1363 aa13.3□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 ATAD5Q96QE3 1844 aa13.29□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 BAZ2AQ9UIF9 1905 aaKnown RBP13.29□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 SSC5DA1L4H1 1573 aa13.29□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 ENTPD3O75355 529 aa13.29□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 ADD2P35612 726 aa13.29□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 RGS3P49796 1198 aa13.29□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 HUNKP57058 714 aa13.29□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 RHBDL3P58872 404 aa13.29□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 NFIAQ12857 509 aa13.29□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 PRKG1Q13976 671 aa13.29□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 NBPF12Q5TAG4 269 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 CENPQQ7L2Z9 268 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 ADGRA1Q86SQ6 560 aa13.29□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 KBTBD3Q8NAB2 608 aa13.29□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 MIGA1Q8NAN2 632 aa13.29□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 SH3RF3Q8TEJ3 882 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 CCDC136Q96JN2 1154 aa13.29□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 FSD1Q9BTV5 496 aa13.29□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 STAP2Q9UGK3 403 aa13.29□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 MKRN1Q9UHC7 482 aaKnown RBP13.29□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 DDX60LQ5H9U9 1706 aaKnown RBP13.28□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 LAMB1P07942 1786 aa13.28□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 MAGEB6P1A0A0J9YX57 407 aa13.28□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 RASSF10A6NK89 507 aa13.28□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 WDHD1O75717 1129 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 ECE1P42892 770 aa13.28□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 USP5P45974 858 aa13.28□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 IREB2P48200 963 aaKnown RBP13.28□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 PPP4CP60510 307 aa13.28□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 DEFB115Q30KQ5 88 aa13.28□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 DCAF15Q66K64 600 aa13.28□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 SAPCD2Q86UD0 394 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms