RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 PLCB2Q00722 1185 aa16.58■□□□□ 0.25
RAB40A-201ENST00000304236 TTLL5Q6EMB2 1281 aa16.58■□□□□ 0.25
RAB40A-201ENST00000304236 PRR5LQ6MZQ0 368 aa16.58■□□□□ 0.25
RAB40A-201ENST00000304236 NAP1L2Q9ULW6 460 aaPredicted RBP16.58■□□□□ 0.25
RAB40A-201ENST00000304236 ANO6Q4KMQ2 910 aa16.58■□□□□ 0.24
RAB40A-201ENST00000304236 CKAP2LQ8IYA6 745 aa16.58■□□□□ 0.24
RAB40A-201ENST00000304236 CNNM1Q9NRU3 951 aa16.58■□□□□ 0.24
RAB40A-201ENST00000304236 ZNF213O14771 459 aa16.57■□□□□ 0.24
RAB40A-201ENST00000304236 PDE8AO60658 829 aa16.57■□□□□ 0.24
RAB40A-201ENST00000304236 HLFQ16534 295 aa16.57■□□□□ 0.24
RAB40A-201ENST00000304236 RALYLQ86SE5 291 aaKnown RBP16.57■□□□□ 0.24
RAB40A-201ENST00000304236 MB21D2Q8IYB1 491 aaPredicted RBP16.57■□□□□ 0.24
RAB40A-201ENST00000304236 CNBD1Q8NA66 436 aa16.57■□□□□ 0.24
RAB40A-201ENST00000304236 ZNF622Q969S3 477 aaKnown RBP eCLIP16.57■□□□□ 0.24
RAB40A-201ENST00000304236 CCDC85AQ96PX6 553 aaPredicted RBP16.57■□□□□ 0.24
RAB40A-201ENST00000304236 SCN7AQ01118 1682 aa16.57■□□□□ 0.24
RAB40A-201ENST00000304236 AKAP11Q9UKA4 1901 aa16.57■□□□□ 0.24
RAB40A-201ENST00000304236 IRS4O14654 1257 aaPredicted RBP16.57■□□□□ 0.24
RAB40A-201ENST00000304236 FOXP2O15409 715 aa16.57■□□□□ 0.24
RAB40A-201ENST00000304236 GPAA1O43292 621 aa16.57■□□□□ 0.24
RAB40A-201ENST00000304236 PRC1O43663 620 aa16.57■□□□□ 0.24
RAB40A-201ENST00000304236 UQCRFS1P1P0C7P4 283 aa16.57■□□□□ 0.24
RAB40A-201ENST00000304236 RASSF7Q02833 373 aa16.57■□□□□ 0.24
RAB40A-201ENST00000304236 SCARF1Q14162 830 aa16.57■□□□□ 0.24
RAB40A-201ENST00000304236 NOLC1Q14978 699 aaKnown RBP eCLIP16.57■□□□□ 0.24
RAB40A-201ENST00000304236 CLEC4GQ6UXB4 293 aa16.57■□□□□ 0.24
RAB40A-201ENST00000304236 CCDC73Q6ZRK6 1079 aa16.57■□□□□ 0.24
RAB40A-201ENST00000304236 TDRD7Q8NHU6 1098 aaKnown RBP16.57■□□□□ 0.24
RAB40A-201ENST00000304236 GREM2Q9H772 168 aa16.57■□□□□ 0.24
RAB40A-201ENST00000304236 CBX8Q9HC52 389 aa16.57■□□□□ 0.24
RAB40A-201ENST00000304236 NCOA5Q9HCD5 579 aaKnown RBP16.57■□□□□ 0.24
RAB40A-201ENST00000304236 ZNF652Q9Y2D9 606 aa16.57■□□□□ 0.24
RAB40A-201ENST00000304236 AP5Z1O43299 807 aa16.56■□□□□ 0.24
RAB40A-201ENST00000304236 LMNB1P20700 586 aa16.56■□□□□ 0.24
RAB40A-201ENST00000304236 GPTP24298 496 aa16.56■□□□□ 0.24
RAB40A-201ENST00000304236 ADD2P35612 726 aa16.56■□□□□ 0.24
RAB40A-201ENST00000304236 ST5P78524 1137 aa16.56■□□□□ 0.24
RAB40A-201ENST00000304236 UBE3CQ15386 1083 aa16.56■□□□□ 0.24
RAB40A-201ENST00000304236 CCAR1Q8IX12 1150 aaKnown RBP16.56■□□□□ 0.24
RAB40A-201ENST00000304236 PUS7LQ9H0K6 701 aaKnown RBP16.56■□□□□ 0.24
RAB40A-201ENST00000304236 TRMT112Q9UI30 125 aaKnown RBP16.56■□□□□ 0.24
RAB40A-201ENST00000304236 ZC3H4Q9UPT8 1303 aaKnown RBP16.56■□□□□ 0.24
RAB40A-201ENST00000304236 MCAMP43121 646 aa16.55■□□□□ 0.24
RAB40A-201ENST00000304236 CHST3Q7LGC8 479 aa16.55■□□□□ 0.24
RAB40A-201ENST00000304236 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.55■□□□□ 0.24
RAB40A-201ENST00000304236 CCDC24Q8N4L8 307 aa16.55■□□□□ 0.24
RAB40A-201ENST00000304236 VGLL2Q8N8G2 317 aa16.55■□□□□ 0.24
RAB40A-201ENST00000304236 USP28Q96RU2 1077 aa16.55■□□□□ 0.24
RAB40A-201ENST00000304236 TTC12Q9H892 705 aaPredicted RBP16.55■□□□□ 0.24
RAB40A-201ENST00000304236 SPTLC3Q9NUV7 552 aa16.55■□□□□ 0.24
RAB40A-201ENST00000304236 NUP98P52948 1817 aa16.55■□□□□ 0.24
RAB40A-201ENST00000304236 PDE8BO95263 885 aa16.55■□□□□ 0.24
RAB40A-201ENST00000304236 TRDNQ13061 729 aa16.55■□□□□ 0.24
RAB40A-201ENST00000304236 HSP90AA2PQ14568 343 aaPredicted RBP16.55■□□□□ 0.24
RAB40A-201ENST00000304236 ZNF830Q96NB3 372 aaPredicted RBP16.55■□□□□ 0.24
RAB40A-201ENST00000304236 DLEC1Q9Y238 1755 aa16.54■□□□□ 0.24
RAB40A-201ENST00000304236 FDPSP14324 419 aaKnown RBP16.54■□□□□ 0.24
RAB40A-201ENST00000304236 ZNF165P49910 485 aa16.54■□□□□ 0.24
RAB40A-201ENST00000304236 HAND2P61296 217 aa16.54■□□□□ 0.24
RAB40A-201ENST00000304236 LUZP1Q86V48 1076 aa16.54■□□□□ 0.24
RAB40A-201ENST00000304236 RBM46Q8TBY0 533 aaKnown RBP16.54■□□□□ 0.24
RAB40A-201ENST00000304236 RTEL1Q9NZ71 1219 aa16.54■□□□□ 0.24
RAB40A-201ENST00000304236 DDX60Q8IY21 1712 aaKnown RBP16.54■□□□□ 0.24
RAB40A-201ENST00000304236 MROH5Q6ZUA9 1318 aa16.54■□□□□ 0.24
RAB40A-201ENST00000304236 KLF18A0A0U1RQI7 1052 aa16.53■□□□□ 0.24
RAB40A-201ENST00000304236 RGL2O15211 777 aa16.53■□□□□ 0.24
RAB40A-201ENST00000304236 ARID4AP29374 1257 aaPredicted RBP16.53■□□□□ 0.24
RAB40A-201ENST00000304236 APLP1P51693 650 aa16.53■□□□□ 0.24
RAB40A-201ENST00000304236 CEBPZQ03701 1054 aaKnown RBP16.53■□□□□ 0.24
RAB40A-201ENST00000304236 NBPF5PQ86XG9 351 aaPredicted RBP16.53■□□□□ 0.24
RAB40A-201ENST00000304236 C8orf76Q96K31 380 aa16.53■□□□□ 0.24
RAB40A-201ENST00000304236 UQCRHLA0A096LP55 91 aa16.53■□□□□ 0.24
RAB40A-201ENST00000304236 GOLGA8BA8MQT2 603 aa16.53■□□□□ 0.24
RAB40A-201ENST00000304236 CPLX1O14810 134 aa16.53■□□□□ 0.24
RAB40A-201ENST00000304236 KINO60870 393 aaKnown RBP16.53■□□□□ 0.24
RAB40A-201ENST00000304236 UQCRHP07919 91 aa16.53■□□□□ 0.24
RAB40A-201ENST00000304236 FOSBP53539 338 aa16.53■□□□□ 0.24
RAB40A-201ENST00000304236 FAM160A1Q05DH4 1040 aa16.53■□□□□ 0.24
RAB40A-201ENST00000304236 STX1AQ16623 288 aa16.53■□□□□ 0.24
RAB40A-201ENST00000304236 DNTTIP2Q5QJE6 756 aaKnown RBP16.53■□□□□ 0.24
RAB40A-201ENST00000304236 SLC9C2Q5TAH2 1124 aa16.53■□□□□ 0.24
RAB40A-201ENST00000304236 BRAPQ7Z569 592 aa16.53■□□□□ 0.24
RAB40A-201ENST00000304236 ZNF34Q8IZ26 560 aa16.53■□□□□ 0.24
RAB40A-201ENST00000304236 SYNE4Q8N205 404 aa16.53■□□□□ 0.24
RAB40A-201ENST00000304236 CNKSR1Q969H4 720 aa16.53■□□□□ 0.24
RAB40A-201ENST00000304236 PRIMPOLQ96LW4 560 aa16.53■□□□□ 0.24
RAB40A-201ENST00000304236 RRAGCQ9HB90 399 aa16.53■□□□□ 0.24
RAB40A-201ENST00000304236 A0A1W2PQ27 194 aa16.52■□□□□ 0.24
RAB40A-201ENST00000304236 A0A1W2PQ64 194 aa16.52■□□□□ 0.24
RAB40A-201ENST00000304236 A0A1W2PQD8 194 aa16.52■□□□□ 0.24
RAB40A-201ENST00000304236 DYNC1I1O14576 645 aa16.52■□□□□ 0.24
RAB40A-201ENST00000304236 PUM3Q15397 648 aaKnown RBP16.52■□□□□ 0.24
RAB40A-201ENST00000304236 STYK1Q6J9G0 422 aa16.52■□□□□ 0.24
RAB40A-201ENST00000304236 LPIN2Q92539 896 aa16.52■□□□□ 0.24
RAB40A-201ENST00000304236 ORC3Q9UBD5 711 aaPredicted RBP16.52■□□□□ 0.24
RAB40A-201ENST00000304236 SBF1O95248 1867 aa16.51■□□□□ 0.23
RAB40A-201ENST00000304236 C21orf2O43822 256 aa16.51■□□□□ 0.23
RAB40A-201ENST00000304236 ANTXR2P58335 489 aa16.51■□□□□ 0.23
RAB40A-201ENST00000304236 ADALQ6DHV7 355 aa16.51■□□□□ 0.23
RAB40A-201ENST00000304236 PI16Q6UXB8 463 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms