RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 FSD1Q9BTV5 496 aa24.23■■□□□ 1.47
SCAMP3-201ENST00000302631 CHGBP05060 677 aa24.22■■□□□ 1.47
SCAMP3-201ENST00000302631 RBM5P52756 815 aaKnown RBP eCLIP24.22■■□□□ 1.47
SCAMP3-201ENST00000302631 RILPL2Q969X0 211 aa24.22■■□□□ 1.47
SCAMP3-201ENST00000302631 CDK5RAP2Q96SN8 1893 aa24.21■■□□□ 1.47
SCAMP3-201ENST00000302631 BTDP43251 543 aa24.2■■□□□ 1.46
SCAMP3-201ENST00000302631 RHBDL3P58872 404 aa24.2■■□□□ 1.46
SCAMP3-201ENST00000302631 SPDYE2Q495Y8 402 aa24.2■■□□□ 1.46
SCAMP3-201ENST00000302631 SLFNL1Q499Z3 407 aa24.2■■□□□ 1.46
SCAMP3-201ENST00000302631 ZMYM1Q5SVZ6 1142 aa24.19■■□□□ 1.46
SCAMP3-201ENST00000302631 CDC42EP5Q6NZY7 148 aa24.19■■□□□ 1.46
SCAMP3-201ENST00000302631 APPBP2Q92624 585 aa24.19■■□□□ 1.46
SCAMP3-201ENST00000302631 RIOK1Q9BRS2 568 aaKnown RBP24.19■■□□□ 1.46
SCAMP3-201ENST00000302631 PITPNM2Q9BZ72 1349 aa24.19■■□□□ 1.46
SCAMP3-201ENST00000302631 FOCADQ5VW36 1801 aa24.19■■□□□ 1.46
SCAMP3-201ENST00000302631 ASTN2O75129 1339 aaPredicted RBP24.18■■□□□ 1.46
SCAMP3-201ENST00000302631 POTEIP0CG38 1075 aa24.18■■□□□ 1.46
SCAMP3-201ENST00000302631 POTEJP0CG39 1038 aa24.18■■□□□ 1.46
SCAMP3-201ENST00000302631 LDHDQ86WU2 507 aa24.18■■□□□ 1.46
SCAMP3-201ENST00000302631 CERS3Q8IU89 383 aa24.18■■□□□ 1.46
SCAMP3-201ENST00000302631 TDRD3Q9H7E2 651 aaKnown RBP24.18■■□□□ 1.46
SCAMP3-201ENST00000302631 ZNF70Q9UC06 446 aaPredicted RBP24.18■■□□□ 1.46
SCAMP3-201ENST00000302631 BAG3O95817 575 aa24.18■■□□□ 1.46
SCAMP3-201ENST00000302631 EAPPQ56P03 285 aaPredicted RBP24.18■■□□□ 1.46
SCAMP3-201ENST00000302631 FKBP1CQ5VVH2 108 aa24.18■■□□□ 1.46
SCAMP3-201ENST00000302631 MYO1BO43795 1136 aa24.17■■□□□ 1.46
SCAMP3-201ENST00000302631 OSBP2Q969R2 916 aa24.17■■□□□ 1.46
SCAMP3-201ENST00000302631 PUS7LQ9H0K6 701 aaKnown RBP24.17■■□□□ 1.46
SCAMP3-201ENST00000302631 USP40Q9NVE5 1235 aa24.17■■□□□ 1.46
SCAMP3-201ENST00000302631 AATFQ9NY61 560 aaKnown RBP eCLIP24.17■■□□□ 1.46
SCAMP3-201ENST00000302631 HIP1O00291 1037 aa24.16■■□□□ 1.46
SCAMP3-201ENST00000302631 PLCG2P16885 1265 aa24.16■■□□□ 1.46
SCAMP3-201ENST00000302631 MIGA1Q8NAN2 632 aa24.16■■□□□ 1.46
SCAMP3-201ENST00000302631 IDI2Q9BXS1 227 aa24.16■■□□□ 1.46
SCAMP3-201ENST00000302631 NPM3O75607 178 aaKnown RBP24.15■■□□□ 1.46
SCAMP3-201ENST00000302631 DYNLL1P63167 89 aaKnown RBP24.15■■□□□ 1.46
SCAMP3-201ENST00000302631 ANGEL2Q5VTE6 544 aaKnown RBP24.15■■□□□ 1.46
SCAMP3-201ENST00000302631 NOL10Q9BSC4 688 aaKnown RBP24.15■■□□□ 1.46
SCAMP3-201ENST00000302631 HELLSQ9NRZ9 838 aa24.15■■□□□ 1.46
SCAMP3-201ENST00000302631 GGA3Q9NZ52 723 aa24.15■■□□□ 1.46
SCAMP3-201ENST00000302631 MAGEB6P1A0A0J9YX57 407 aa24.14■■□□□ 1.45
SCAMP3-201ENST00000302631 CLRN2A0PK11 232 aa24.14■■□□□ 1.45
SCAMP3-201ENST00000302631 WDHD1O75717 1129 aaPredicted RBP24.14■■□□□ 1.45
SCAMP3-201ENST00000302631 APOBEC3FQ8IUX4 373 aaKnown RBP24.13■■□□□ 1.45
SCAMP3-201ENST00000302631 SH3RF3Q8TEJ3 882 aaPredicted RBP24.13■■□□□ 1.45
SCAMP3-201ENST00000302631 CHMLP26374 656 aa24.12■■□□□ 1.45
SCAMP3-201ENST00000302631 NMIQ13287 307 aaPredicted RBP24.12■■□□□ 1.45
SCAMP3-201ENST00000302631 LCORLQ8N3X6 602 aa24.12■■□□□ 1.45
SCAMP3-201ENST00000302631 DCPSQ96C86 337 aaKnown RBP24.12■■□□□ 1.45
SCAMP3-201ENST00000302631 FAM227BQ96M60 508 aa24.12■■□□□ 1.45
SCAMP3-201ENST00000302631 STRBPQ96SI9 672 aaKnown RBP24.12■■□□□ 1.45
SCAMP3-201ENST00000302631 SEC62Q99442 399 aaKnown RBP24.12■■□□□ 1.45
SCAMP3-201ENST00000302631 A0A0D9SFI3 127 aa24.11■■□□□ 1.45
SCAMP3-201ENST00000302631 M0R2C6 588 aa24.11■■□□□ 1.45
SCAMP3-201ENST00000302631 TOMM70O94826 608 aa24.11■■□□□ 1.45
SCAMP3-201ENST00000302631 MBD4O95243 580 aa24.11■■□□□ 1.45
SCAMP3-201ENST00000302631 CHADLQ6NUI6 762 aa24.11■■□□□ 1.45
SCAMP3-201ENST00000302631 FAM83AQ86UY5 434 aa24.11■■□□□ 1.45
SCAMP3-201ENST00000302631 TMOD2Q9NZR1 351 aa24.11■■□□□ 1.45
SCAMP3-201ENST00000302631 FAM198AQ9UFP1 575 aa24.11■■□□□ 1.45
SCAMP3-201ENST00000302631 CLEC11AQ9Y240 323 aa24.11■■□□□ 1.45
SCAMP3-201ENST00000302631 CNTNAP1P78357 1384 aa24.11■■□□□ 1.45
SCAMP3-201ENST00000302631 NFIAQ12857 509 aa24.1■■□□□ 1.45
SCAMP3-201ENST00000302631 TNFAIP1Q13829 316 aa24.1■■□□□ 1.45
SCAMP3-201ENST00000302631 MCMDC2Q4G0Z9 681 aa24.1■■□□□ 1.45
SCAMP3-201ENST00000302631 TEX11Q8IYF3 940 aa24.1■■□□□ 1.45
SCAMP3-201ENST00000302631 RBM46Q8TBY0 533 aaKnown RBP24.1■■□□□ 1.45
SCAMP3-201ENST00000302631 AIDAQ96BJ3 306 aa24.1■■□□□ 1.45
SCAMP3-201ENST00000302631 ARMT1Q9H993 441 aa24.1■■□□□ 1.45
SCAMP3-201ENST00000302631 GPAA1O43292 621 aa24.1■■□□□ 1.45
SCAMP3-201ENST00000302631 ENTPD3O75355 529 aa24.1■■□□□ 1.45
SCAMP3-201ENST00000302631 CACNB3P54284 484 aa24.1■■□□□ 1.45
SCAMP3-201ENST00000302631 CDC37L1Q7L3B6 337 aa24.1■■□□□ 1.45
SCAMP3-201ENST00000302631 VEZTQ9HBM0 779 aa24.1■■□□□ 1.45
SCAMP3-201ENST00000302631 DDX4Q9NQI0 724 aaKnown RBP24.1■■□□□ 1.45
SCAMP3-201ENST00000302631 DIAPH3Q9NSV4 1193 aa24.1■■□□□ 1.45
SCAMP3-201ENST00000302631 MKRN1Q9UHC7 482 aaKnown RBP24.1■■□□□ 1.45
SCAMP3-201ENST00000302631 MAP1SQ66K74 1059 aaPredicted RBP24.09■■□□□ 1.45
SCAMP3-201ENST00000302631 PPP2R3BQ9Y5P8 575 aa24.09■■□□□ 1.45
SCAMP3-201ENST00000302631 COL2A1P02458 1487 aaPredicted RBP24.08■■□□□ 1.45
SCAMP3-201ENST00000302631 DDX60LQ5H9U9 1706 aaKnown RBP24.08■■□□□ 1.45
SCAMP3-201ENST00000302631 MYH1P12882 1939 aa24.08■■□□□ 1.45
SCAMP3-201ENST00000302631 TCP10L2B9ZVM9 353 aa24.08■■□□□ 1.44
SCAMP3-201ENST00000302631 ITGBL1O95965 494 aaPredicted RBP24.08■■□□□ 1.44
SCAMP3-201ENST00000302631 KRT26Q7Z3Y9 468 aa24.08■■□□□ 1.44
SCAMP3-201ENST00000302631 FAM151AQ8WW52 585 aa24.08■■□□□ 1.44
SCAMP3-201ENST00000302631 CRNKL1Q9BZJ0 848 aaKnown RBP24.08■■□□□ 1.44
SCAMP3-201ENST00000302631 DEFB129Q9H1M3 183 aa24.08■■□□□ 1.44
SCAMP3-201ENST00000302631 RPAP1Q9BWH6 1393 aaPredicted RBP24.08■■□□□ 1.44
SCAMP3-201ENST00000302631 TNNI2P48788 182 aa24.07■■□□□ 1.44
SCAMP3-201ENST00000302631 RASA3Q14644 834 aa24.07■■□□□ 1.44
SCAMP3-201ENST00000302631 CWC27Q6UX04 472 aaKnown RBP24.07■■□□□ 1.44
SCAMP3-201ENST00000302631 SULF1Q8IWU6 871 aa24.07■■□□□ 1.44
SCAMP3-201ENST00000302631 TGFBRAP1Q8WUH2 860 aa24.07■■□□□ 1.44
SCAMP3-201ENST00000302631 RAD50Q92878 1312 aa24.06■■□□□ 1.44
SCAMP3-201ENST00000302631 GNAT2P19087 354 aa24.06■■□□□ 1.44
SCAMP3-201ENST00000302631 USP48Q86UV5 1035 aa24.06■■□□□ 1.44
SCAMP3-201ENST00000302631 SMC1BQ8NDV3 1235 aa24.06■■□□□ 1.44
SCAMP3-201ENST00000302631 TEPSINQ96N21 525 aa24.06■■□□□ 1.44
SCAMP3-201ENST00000302631 GLIS2Q9BZE0 524 aaPredicted RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms