RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 PDE11AQ9HCR9 933 aa13.83□□□□□ -0.2
PDGFD-201ENST00000302251 RGPD8O14715 1765 aaPredicted RBP13.82□□□□□ -0.2
PDGFD-201ENST00000302251 TDRD12Q587J7 1177 aaKnown RBP13.82□□□□□ -0.2
PDGFD-201ENST00000302251 BRAPQ7Z569 592 aa13.82□□□□□ -0.2
PDGFD-201ENST00000302251 PSMB7Q99436 277 aa13.82□□□□□ -0.2
PDGFD-201ENST00000302251 CWC25Q9NXE8 425 aaPredicted RBP13.82□□□□□ -0.2
PDGFD-201ENST00000302251 FMN2Q9NZ56 1722 aa13.82□□□□□ -0.2
PDGFD-201ENST00000302251 PAFAH1B1P43034 410 aa13.82□□□□□ -0.2
PDGFD-201ENST00000302251 MTIF2P46199 727 aaKnown RBP13.82□□□□□ -0.2
PDGFD-201ENST00000302251 AKAP4Q5JQC9 854 aa13.82□□□□□ -0.2
PDGFD-201ENST00000302251 NBPF11Q86T75 865 aa13.82□□□□□ -0.2
PDGFD-201ENST00000302251 LLPHQ9BRT6 129 aaKnown RBP13.82□□□□□ -0.2
PDGFD-201ENST00000302251 KAT6BQ8WYB5 2073 aa13.82□□□□□ -0.2
PDGFD-201ENST00000302251 hCG_1642624A0A1W2PR95 340 aa13.82□□□□□ -0.2
PDGFD-201ENST00000302251 IQCEQ6IPM2 695 aa13.82□□□□□ -0.2
PDGFD-201ENST00000302251 NUTM2AQ8IVF1 878 aaPredicted RBP13.82□□□□□ -0.2
PDGFD-201ENST00000302251 CABP5Q9NP86 173 aa13.82□□□□□ -0.2
PDGFD-201ENST00000302251 TTC21AQ8NDW8 1320 aa13.82□□□□□ -0.2
PDGFD-201ENST00000302251 MYO1BO43795 1136 aa13.81□□□□□ -0.2
PDGFD-201ENST00000302251 NLRP5P59047 1200 aa13.81□□□□□ -0.2
PDGFD-201ENST00000302251 KBTBD3Q8NAB2 608 aa13.81□□□□□ -0.2
PDGFD-201ENST00000302251 EEF2KMTQ96G04 330 aa13.81□□□□□ -0.2
PDGFD-201ENST00000302251 DDX21Q9NR30 783 aaKnown RBP eCLIP13.81□□□□□ -0.2
PDGFD-201ENST00000302251 EBAG9O00559 213 aa13.81□□□□□ -0.2
PDGFD-201ENST00000302251 MFSD6Q6ZSS7 791 aa13.81□□□□□ -0.2
PDGFD-201ENST00000302251 PROSER2Q86WR7 435 aaPredicted RBP13.81□□□□□ -0.2
PDGFD-201ENST00000302251 CMTR1Q8N1G2 835 aaKnown RBP13.81□□□□□ -0.2
PDGFD-201ENST00000302251 KRI1Q8N9T8 703 aaKnown RBP13.81□□□□□ -0.2
PDGFD-201ENST00000302251 ATRIPQ8WXE1 791 aa13.81□□□□□ -0.2
PDGFD-201ENST00000302251 KCNJ14Q9UNX9 436 aa13.81□□□□□ -0.2
PDGFD-201ENST00000302251 RPAP1Q9BWH6 1393 aaPredicted RBP13.81□□□□□ -0.2
PDGFD-201ENST00000302251 CCDC196A0A1B0GTZ2 297 aa13.81□□□□□ -0.2
PDGFD-201ENST00000302251 CHGBP05060 677 aa13.81□□□□□ -0.2
PDGFD-201ENST00000302251 SNRPA1P09661 255 aaKnown RBP13.81□□□□□ -0.2
PDGFD-201ENST00000302251 SLF1Q9BQI6 1058 aa13.81□□□□□ -0.2
PDGFD-201ENST00000302251 A0A1B0GUL7 405 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 KCNA6P17658 529 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 ERCC3P19447 782 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 CCDC96Q2M329 555 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 KRT40Q6A162 431 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 PLA2G4DQ86XP0 818 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 ANKRD7Q92527 254 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 TRIM47Q96LD4 638 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 ATP7BP35670 1465 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 MACROD2A1Z1Q3 448 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 AKR1B10O60218 316 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 CACNA2D4Q7Z3S7 1137 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 EFCAB8A8MWE9 144 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 UBXN1Q04323 297 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 SF3A3Q12874 501 aaKnown RBP eCLIP13.8□□□□□ -0.2
PDGFD-201ENST00000302251 RESTQ13127 1097 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 ATL3Q6DD88 541 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 MAATS1Q7Z4T9 603 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 GPR161Q8N6U8 529 aaKnown RBP13.8□□□□□ -0.2
PDGFD-201ENST00000302251 NSUN7Q8NE18 718 aaKnown RBP13.8□□□□□ -0.2
PDGFD-201ENST00000302251 RCOR1Q9UKL0 485 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 PCDHA5Q9Y5H7 936 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 TAF6LQ9Y6J9 622 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 PIP4K2BP78356 416 aa13.8□□□□□ -0.2
PDGFD-201ENST00000302251 DBNLQ9UJU6 430 aaKnown RBP13.8□□□□□ -0.2
PDGFD-201ENST00000302251 MORC2Q9Y6X9 1032 aaPredicted RBP13.8□□□□□ -0.2
PDGFD-201ENST00000302251 RIMS1Q86UR5 1692 aaKnown RBP13.79□□□□□ -0.2
PDGFD-201ENST00000302251 IDEP14735 1019 aa13.79□□□□□ -0.2
PDGFD-201ENST00000302251 PDIA3P30101 505 aaKnown RBP13.79□□□□□ -0.2
PDGFD-201ENST00000302251 IRX5P78411 483 aaPredicted RBP13.79□□□□□ -0.2
PDGFD-201ENST00000302251 TOB2Q14106 344 aaPredicted RBP13.79□□□□□ -0.2
PDGFD-201ENST00000302251 WTAPQ15007 396 aa13.79□□□□□ -0.2
PDGFD-201ENST00000302251 RTN1Q16799 776 aa13.79□□□□□ -0.2
PDGFD-201ENST00000302251 CCDC122Q5T0U0 273 aa13.79□□□□□ -0.2
PDGFD-201ENST00000302251 SPECC1LQ69YQ0 1117 aa13.79□□□□□ -0.2
PDGFD-201ENST00000302251 WWC2Q6AWC2 1192 aa13.79□□□□□ -0.2
PDGFD-201ENST00000302251 RNMTO43148 476 aaKnown RBP13.79□□□□□ -0.2
PDGFD-201ENST00000302251 SASH1O94885 1247 aa13.79□□□□□ -0.2
PDGFD-201ENST00000302251 IL15P40933 162 aaPredicted RBP13.79□□□□□ -0.2
PDGFD-201ENST00000302251 PARD6BQ9BYG5 372 aa13.79□□□□□ -0.2
PDGFD-201ENST00000302251 CCDC113Q9H0I3 377 aa13.79□□□□□ -0.2
PDGFD-201ENST00000302251 GOLPH3LQ9H4A5 285 aa13.79□□□□□ -0.2
PDGFD-201ENST00000302251 PFKFB2O60825 505 aa13.79□□□□□ -0.2
PDGFD-201ENST00000302251 RNASE9P60153 205 aaKnown RBP13.79□□□□□ -0.2
PDGFD-201ENST00000302251 MAP3K12Q12852 859 aa13.79□□□□□ -0.2
PDGFD-201ENST00000302251 GCKRQ14397 625 aa13.79□□□□□ -0.2
PDGFD-201ENST00000302251 KANK3Q6NY19 840 aa13.79□□□□□ -0.2
PDGFD-201ENST00000302251 AIFM3Q96NN9 605 aa13.79□□□□□ -0.2
PDGFD-201ENST00000302251 SBNO1A3KN83 1393 aa13.78□□□□□ -0.2
PDGFD-201ENST00000302251 N4BP2Q86UW6 1770 aaPredicted RBP13.78□□□□□ -0.2
PDGFD-201ENST00000302251 ZMYND10O75800 440 aa13.78□□□□□ -0.2
PDGFD-201ENST00000302251 AMOTL1Q8IY63 956 aa13.78□□□□□ -0.2
PDGFD-201ENST00000302251 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.78□□□□□ -0.2
PDGFD-201ENST00000302251 PSDA5PKW4 1024 aaPredicted RBP13.78□□□□□ -0.2
PDGFD-201ENST00000302251 USO1O60763 962 aaKnown RBP13.78□□□□□ -0.2
PDGFD-201ENST00000302251 KRT18P05783 430 aaKnown RBP13.78□□□□□ -0.2
PDGFD-201ENST00000302251 ATF3P18847 181 aa13.78□□□□□ -0.2
PDGFD-201ENST00000302251 LTKP29376 864 aa13.78□□□□□ -0.2
PDGFD-201ENST00000302251 LONRF2Q1L5Z9 754 aa13.78□□□□□ -0.2
PDGFD-201ENST00000302251 SERTAD1Q9UHV2 236 aa13.78□□□□□ -0.2
PDGFD-201ENST00000302251 USP54Q70EL1 1684 aa13.78□□□□□ -0.2
PDGFD-201ENST00000302251 VWA3AA6NCI4 1184 aa13.78□□□□□ -0.2
PDGFD-201ENST00000302251 HSPD1P10809 573 aaKnown RBP13.78□□□□□ -0.2
PDGFD-201ENST00000302251 MCM3P25205 808 aa13.78□□□□□ -0.2
PDGFD-201ENST00000302251 KRT9P35527 623 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms