RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 HSPD1P10809 573 aaKnown RBP12.49□□□□□ -0.41
ZNF558-201ENST00000301475 ICE2Q659A1 982 aa12.49□□□□□ -0.41
ZNF558-201ENST00000301475 BRAPQ7Z569 592 aa12.49□□□□□ -0.41
ZNF558-201ENST00000301475 ORAI2Q96SN7 254 aa12.49□□□□□ -0.41
ZNF558-201ENST00000301475 PDIA6Q15084 440 aa12.49□□□□□ -0.41
ZNF558-201ENST00000301475 SYNE3Q6ZMZ3 975 aa12.49□□□□□ -0.41
ZNF558-201ENST00000301475 SRGAP1Q7Z6B7 1085 aa12.49□□□□□ -0.41
ZNF558-201ENST00000301475 C19orf44Q9H6X5 657 aa12.49□□□□□ -0.41
ZNF558-201ENST00000301475 HPS5Q9UPZ3 1129 aa12.49□□□□□ -0.41
ZNF558-201ENST00000301475 GOLIM4O00461 696 aa12.48□□□□□ -0.41
ZNF558-201ENST00000301475 IVLP07476 585 aa12.48□□□□□ -0.41
ZNF558-201ENST00000301475 SLC39A14Q15043 492 aa12.48□□□□□ -0.41
ZNF558-201ENST00000301475 HNRNPLLQ8WVV9 542 aaKnown RBP12.48□□□□□ -0.41
ZNF558-201ENST00000301475 AKAP2Q9Y2D5 859 aa12.48□□□□□ -0.41
ZNF558-201ENST00000301475 ANKRD65E5RJM6 399 aa12.48□□□□□ -0.41
ZNF558-201ENST00000301475 USP5P45974 858 aa12.48□□□□□ -0.41
ZNF558-201ENST00000301475 GCKRQ14397 625 aa12.48□□□□□ -0.41
ZNF558-201ENST00000301475 AKAP4Q5JQC9 854 aa12.48□□□□□ -0.41
ZNF558-201ENST00000301475 ABCB6Q9NP58 842 aa12.48□□□□□ -0.41
ZNF558-201ENST00000301475 RAB21Q9UL25 225 aa12.48□□□□□ -0.41
ZNF558-201ENST00000301475 L1RE1Q9UN81 338 aa12.48□□□□□ -0.41
ZNF558-201ENST00000301475 PHF8Q9UPP1 1060 aa12.48□□□□□ -0.41
ZNF558-201ENST00000301475 MAST3O60307 1309 aa12.48□□□□□ -0.41
ZNF558-201ENST00000301475 ADAMTSL3P82987 1691 aa12.48□□□□□ -0.41
ZNF558-201ENST00000301475 USP54Q70EL1 1684 aa12.48□□□□□ -0.41
ZNF558-201ENST00000301475 EIF3CLB5ME19 914 aaKnown RBP12.48□□□□□ -0.41
ZNF558-201ENST00000301475 FOXN1O15353 648 aa12.48□□□□□ -0.41
ZNF558-201ENST00000301475 RPS6KA5O75582 802 aa12.48□□□□□ -0.41
ZNF558-201ENST00000301475 RIC3Q7Z5B4 369 aa12.48□□□□□ -0.41
ZNF558-201ENST00000301475 MSANTD4Q8NCY6 345 aa12.48□□□□□ -0.41
ZNF558-201ENST00000301475 CLIC6Q96NY7 704 aa12.48□□□□□ -0.41
ZNF558-201ENST00000301475 EIF3CQ99613 913 aaKnown RBP12.48□□□□□ -0.41
ZNF558-201ENST00000301475 NWD2Q9ULI1 1742 aa12.47□□□□□ -0.41
ZNF558-201ENST00000301475 SOWAHDA6NJG2 315 aa12.47□□□□□ -0.41
ZNF558-201ENST00000301475 GOLGA8BA8MQT2 603 aa12.47□□□□□ -0.41
ZNF558-201ENST00000301475 RNMTO43148 476 aaKnown RBP12.47□□□□□ -0.41
ZNF558-201ENST00000301475 DDX58O95786 925 aaKnown RBP12.47□□□□□ -0.41
ZNF558-201ENST00000301475 GTF2A1P52655 376 aaPredicted RBP12.47□□□□□ -0.41
ZNF558-201ENST00000301475 FMR1Q06787 632 aaKnown RBP eCLIP12.47□□□□□ -0.41
ZNF558-201ENST00000301475 ZMYM1Q5SVZ6 1142 aa12.47□□□□□ -0.41
ZNF558-201ENST00000301475 SPECC1LQ69YQ0 1117 aa12.47□□□□□ -0.41
ZNF558-201ENST00000301475 CTR9Q6PD62 1173 aa12.47□□□□□ -0.41
ZNF558-201ENST00000301475 HDXQ7Z353 690 aa12.47□□□□□ -0.41
ZNF558-201ENST00000301475 AIFM3Q96NN9 605 aa12.47□□□□□ -0.41
ZNF558-201ENST00000301475 YY1AP1Q9H869 796 aa12.47□□□□□ -0.41
ZNF558-201ENST00000301475 LZTFL1Q9NQ48 299 aa12.47□□□□□ -0.41
ZNF558-201ENST00000301475 DDX21Q9NR30 783 aaKnown RBP eCLIP12.47□□□□□ -0.41
ZNF558-201ENST00000301475 PCDHA5Q9Y5H7 936 aa12.47□□□□□ -0.41
ZNF558-201ENST00000301475 MAGEA9P43362 315 aa12.47□□□□□ -0.41
ZNF558-201ENST00000301475 TAF7LQ5H9L4 462 aa12.47□□□□□ -0.41
ZNF558-201ENST00000301475 LRRC59Q96AG4 307 aaKnown RBP12.47□□□□□ -0.41
ZNF558-201ENST00000301475 KLF18A0A0U1RQI7 1052 aa12.46□□□□□ -0.41
ZNF558-201ENST00000301475 A0A1B0GUL7 405 aa12.46□□□□□ -0.41
ZNF558-201ENST00000301475 ZNF18P17022 549 aa12.46□□□□□ -0.41
ZNF558-201ENST00000301475 VSNL1P62760 191 aa12.46□□□□□ -0.41
ZNF558-201ENST00000301475 PTPAQ15257 358 aa12.46□□□□□ -0.41
ZNF558-201ENST00000301475 LONRF3Q496Y0 759 aa12.46□□□□□ -0.41
ZNF558-201ENST00000301475 OLFM4Q6UX06 510 aa12.46□□□□□ -0.41
ZNF558-201ENST00000301475 RGS22Q8NE09 1264 aa12.46□□□□□ -0.41
ZNF558-201ENST00000301475 MYD88Q99836 296 aa12.46□□□□□ -0.41
ZNF558-201ENST00000301475 TEX13AQ9BXU3 409 aaPredicted RBP12.46□□□□□ -0.41
ZNF558-201ENST00000301475 HELLSQ9NRZ9 838 aa12.46□□□□□ -0.41
ZNF558-201ENST00000301475 PHACTR2O75167 634 aa12.46□□□□□ -0.41
ZNF558-201ENST00000301475 TTC31Q49AM3 519 aaPredicted RBP12.46□□□□□ -0.41
ZNF558-201ENST00000301475 TRMT44Q8IYL2 757 aaKnown RBP12.46□□□□□ -0.41
ZNF558-201ENST00000301475 CHMP4CQ96CF2 233 aa12.46□□□□□ -0.41
ZNF558-201ENST00000301475 PLEKHA4Q9H4M7 779 aa12.46□□□□□ -0.41
ZNF558-201ENST00000301475 PAG1Q9NWQ8 432 aa12.46□□□□□ -0.41
ZNF558-201ENST00000301475 CDC23Q9UJX2 597 aa12.46□□□□□ -0.41
ZNF558-201ENST00000301475 C4AP0C0L4 1744 aa12.46□□□□□ -0.42
ZNF558-201ENST00000301475 C4BP0C0L5 1744 aa12.46□□□□□ -0.42
ZNF558-201ENST00000301475 DDX60Q8IY21 1712 aaKnown RBP12.46□□□□□ -0.42
ZNF558-201ENST00000301475 MYO1BO43795 1136 aa12.46□□□□□ -0.42
ZNF558-201ENST00000301475 HAND2P61296 217 aa12.46□□□□□ -0.42
ZNF558-201ENST00000301475 LRRC31Q6UY01 552 aa12.46□□□□□ -0.42
ZNF558-201ENST00000301475 RAD9BQ6WBX8 426 aa12.46□□□□□ -0.42
ZNF558-201ENST00000301475 FBXL16Q8N461 479 aa12.46□□□□□ -0.42
ZNF558-201ENST00000301475 GOLGA6L1Q8N7Z2 621 aa12.46□□□□□ -0.42
ZNF558-201ENST00000301475 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.46□□□□□ -0.42
ZNF558-201ENST00000301475 NFE2L3Q9Y4A8 694 aa12.46□□□□□ -0.42
ZNF558-201ENST00000301475 FAM237AA0A1B0GTK4 181 aa12.45□□□□□ -0.42
ZNF558-201ENST00000301475 M0R2C6 588 aa12.45□□□□□ -0.42
ZNF558-201ENST00000301475 RHOXF2BP0C7M4 288 aa12.45□□□□□ -0.42
ZNF558-201ENST00000301475 ZNF827Q17R98 1081 aa12.45□□□□□ -0.42
ZNF558-201ENST00000301475 RESP18Q5W5W9 173 aa12.45□□□□□ -0.42
ZNF558-201ENST00000301475 VPS37DQ86XT2 251 aa12.45□□□□□ -0.42
ZNF558-201ENST00000301475 MSL3Q8N5Y2 521 aaKnown RBP12.45□□□□□ -0.42
ZNF558-201ENST00000301475 DDX17Q92841 729 aaKnown RBP12.45□□□□□ -0.42
ZNF558-201ENST00000301475 MED15Q96RN5 788 aa12.45□□□□□ -0.42
ZNF558-201ENST00000301475 RHOXF2Q9BQY4 288 aa12.45□□□□□ -0.42
ZNF558-201ENST00000301475 TAOK2Q9UL54 1235 aa12.45□□□□□ -0.42
ZNF558-201ENST00000301475 JRKLQ9Y4A0 524 aa12.45□□□□□ -0.42
ZNF558-201ENST00000301475 FOXP2O15409 715 aa12.45□□□□□ -0.42
ZNF558-201ENST00000301475 CCDC175P0C221 793 aa12.45□□□□□ -0.42
ZNF558-201ENST00000301475 MYL6BP14649 208 aa12.45□□□□□ -0.42
ZNF558-201ENST00000301475 CASP8Q14790 479 aa12.45□□□□□ -0.42
ZNF558-201ENST00000301475 CNNM3Q8NE01 707 aa12.45□□□□□ -0.42
ZNF558-201ENST00000301475 ADGRG1Q9Y653 693 aa12.45□□□□□ -0.42
ZNF558-201ENST00000301475 EIF3JO75822 258 aaKnown RBP12.44□□□□□ -0.42
ZNF558-201ENST00000301475 CORO7P57737 925 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms