RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 SPEF2Q9C093 1822 aa17.06■□□□□ 0.32
SMG8-201ENST00000300917 MFSD6Q6ZSS7 791 aa17.06■□□□□ 0.32
SMG8-201ENST00000300917 ANKIB1Q9P2G1 1089 aa17.06■□□□□ 0.32
SMG8-201ENST00000300917 NUP133Q8WUM0 1156 aa17.05■□□□□ 0.32
SMG8-201ENST00000300917 NUP62CLQ9H1M0 184 aa17.05■□□□□ 0.32
SMG8-201ENST00000300917 KIF3AQ9Y496 699 aa17.05■□□□□ 0.32
SMG8-201ENST00000300917 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.05■□□□□ 0.32
SMG8-201ENST00000300917 PTMAP06454 111 aaKnown RBP17.05■□□□□ 0.32
SMG8-201ENST00000300917 ME1P48163 572 aa17.05■□□□□ 0.32
SMG8-201ENST00000300917 NWD2Q9ULI1 1742 aa17.05■□□□□ 0.32
SMG8-201ENST00000300917 TNMDQ9H2S6 317 aa17.04■□□□□ 0.32
SMG8-201ENST00000300917 MAGEB6P1A0A0J9YX57 407 aa17.04■□□□□ 0.32
SMG8-201ENST00000300917 TRIM37O94972 964 aa17.04■□□□□ 0.32
SMG8-201ENST00000300917 PRDX5P30044 214 aa17.04■□□□□ 0.32
SMG8-201ENST00000300917 NFIXQ14938 502 aa17.04■□□□□ 0.32
SMG8-201ENST00000300917 ILDR1Q86SU0 546 aaPredicted RBP17.04■□□□□ 0.32
SMG8-201ENST00000300917 NACAP1Q9BZK3 213 aa17.04■□□□□ 0.32
SMG8-201ENST00000300917 SH2B2O14492 632 aaPredicted RBP17.04■□□□□ 0.32
SMG8-201ENST00000300917 NAA16Q6N069 864 aaPredicted RBP17.04■□□□□ 0.32
SMG8-201ENST00000300917 APOA5Q6Q788 366 aa17.04■□□□□ 0.32
SMG8-201ENST00000300917 AATFQ9NY61 560 aaKnown RBP eCLIP17.04■□□□□ 0.32
SMG8-201ENST00000300917 GOLGA8AA7E2F4 631 aa17.03■□□□□ 0.32
SMG8-201ENST00000300917 PPP1R9BQ96SB3 815 aa17.03■□□□□ 0.32
SMG8-201ENST00000300917 NYXQ9GZU5 481 aa17.03■□□□□ 0.32
SMG8-201ENST00000300917 ZSCAN16Q9H4T2 348 aaPredicted RBP17.03■□□□□ 0.32
SMG8-201ENST00000300917 UBE4AQ14139 1066 aa17.03■□□□□ 0.32
SMG8-201ENST00000300917 AKNAD1Q5T1N1 836 aa17.03■□□□□ 0.32
SMG8-201ENST00000300917 QTRT2Q9H974 415 aaKnown RBP17.03■□□□□ 0.32
SMG8-201ENST00000300917 SALL1Q9NSC2 1324 aa17.03■□□□□ 0.32
SMG8-201ENST00000300917 ZBTB43O43298 467 aa17.02■□□□□ 0.32
SMG8-201ENST00000300917 CCDC69A6NI79 296 aa17.02■□□□□ 0.32
SMG8-201ENST00000300917 KIF28PB7ZC32 967 aa17.02■□□□□ 0.32
SMG8-201ENST00000300917 DHX16O60231 1041 aaKnown RBP17.02■□□□□ 0.32
SMG8-201ENST00000300917 TICAM2Q86XR7 235 aa17.02■□□□□ 0.32
SMG8-201ENST00000300917 ZNF384Q8TF68 577 aa17.02■□□□□ 0.32
SMG8-201ENST00000300917 CFAP45Q9UL16 551 aa17.02■□□□□ 0.32
SMG8-201ENST00000300917 SLC12A7Q9Y666 1083 aa17.02■□□□□ 0.32
SMG8-201ENST00000300917 COL1A1P02452 1464 aaPredicted RBP17.02■□□□□ 0.31
SMG8-201ENST00000300917 hCG_1642624A0A1W2PR95 340 aa17.02■□□□□ 0.31
SMG8-201ENST00000300917 HIBADHP31937 336 aaKnown RBP17.02■□□□□ 0.31
SMG8-201ENST00000300917 GNL2Q13823 731 aaKnown RBP17.02■□□□□ 0.31
SMG8-201ENST00000300917 IGDCC4Q8TDY8 1250 aa17.02■□□□□ 0.31
SMG8-201ENST00000300917 ALG1Q9BT22 464 aa17.02■□□□□ 0.31
SMG8-201ENST00000300917 SLC26A6Q9BXS9 759 aa17.02■□□□□ 0.31
SMG8-201ENST00000300917 CLIC4Q9Y696 253 aa17.02■□□□□ 0.31
SMG8-201ENST00000300917 SF3A1Q15459 793 aaKnown RBP17.01■□□□□ 0.31
SMG8-201ENST00000300917 MAP3K11Q16584 847 aa17.01■□□□□ 0.31
SMG8-201ENST00000300917 CCAR1Q8IX12 1150 aaKnown RBP17.01■□□□□ 0.31
SMG8-201ENST00000300917 CNBD1Q8NA66 436 aa17.01■□□□□ 0.31
SMG8-201ENST00000300917 ZNF830Q96NB3 372 aaPredicted RBP17.01■□□□□ 0.31
SMG8-201ENST00000300917 LY9Q9HBG7 655 aa17.01■□□□□ 0.31
SMG8-201ENST00000300917 RANBP6O60518 1105 aaKnown RBP17.01■□□□□ 0.31
SMG8-201ENST00000300917 DDX60Q8IY21 1712 aaKnown RBP17.01■□□□□ 0.31
SMG8-201ENST00000300917 PPARAQ07869 468 aa17.01■□□□□ 0.31
SMG8-201ENST00000300917 RC3H1Q5TC82 1133 aaKnown RBP17.01■□□□□ 0.31
SMG8-201ENST00000300917 PIBF1Q8WXW3 757 aa17■□□□□ 0.31
SMG8-201ENST00000300917 GOLPH3LQ9H4A5 285 aa17■□□□□ 0.31
SMG8-201ENST00000300917 ZNF804BA4D1E1 1349 aa17■□□□□ 0.31
SMG8-201ENST00000300917 SPATA31A6Q5VVP1 1343 aa17■□□□□ 0.31
SMG8-201ENST00000300917 RTL9Q8NET4 1388 aa17■□□□□ 0.31
SMG8-201ENST00000300917 MARCKSP29966 332 aaPredicted RBP16.99■□□□□ 0.31
SMG8-201ENST00000300917 MECOMQ03112 1051 aa16.99■□□□□ 0.31
SMG8-201ENST00000300917 LUZP1Q86V48 1076 aa16.99■□□□□ 0.31
SMG8-201ENST00000300917 FBXO18Q8NFZ0 1043 aa16.99■□□□□ 0.31
SMG8-201ENST00000300917 ELP1O95163 1332 aa16.99■□□□□ 0.31
SMG8-201ENST00000300917 A0A1B0GVL5 298 aa16.99■□□□□ 0.31
SMG8-201ENST00000300917 ATP2B1P20020 1258 aa16.99■□□□□ 0.31
SMG8-201ENST00000300917 EVCP57679 992 aa16.99■□□□□ 0.31
SMG8-201ENST00000300917 STK38Q15208 465 aa16.99■□□□□ 0.31
SMG8-201ENST00000300917 SLC10A5Q5PT55 438 aa16.99■□□□□ 0.31
SMG8-201ENST00000300917 CERKQ8TCT0 537 aa16.99■□□□□ 0.31
SMG8-201ENST00000300917 MTMR7Q9Y216 660 aa16.99■□□□□ 0.31
SMG8-201ENST00000300917 GUCY1A2P33402 732 aa16.99■□□□□ 0.31
SMG8-201ENST00000300917 IARSP41252 1262 aaKnown RBP16.99■□□□□ 0.31
SMG8-201ENST00000300917 FSIP1Q8NA03 581 aa16.99■□□□□ 0.31
SMG8-201ENST00000300917 USP17L12C9JPN9 530 aa16.98■□□□□ 0.31
SMG8-201ENST00000300917 USP17L21D6R901 530 aa16.98■□□□□ 0.31
SMG8-201ENST00000300917 CCDC192P0DO97 292 aa16.98■□□□□ 0.31
SMG8-201ENST00000300917 CYP2D6P10635 497 aa16.98■□□□□ 0.31
SMG8-201ENST00000300917 PDIA4P13667 645 aaKnown RBP16.98■□□□□ 0.31
SMG8-201ENST00000300917 TM4SF1P30408 202 aa16.98■□□□□ 0.31
SMG8-201ENST00000300917 TYRO3Q06418 890 aa16.98■□□□□ 0.31
SMG8-201ENST00000300917 WTAPQ15007 396 aa16.98■□□□□ 0.31
SMG8-201ENST00000300917 SYNE3Q6ZMZ3 975 aa16.98■□□□□ 0.31
SMG8-201ENST00000300917 UBAC1Q9BSL1 405 aa16.98■□□□□ 0.31
SMG8-201ENST00000300917 ATRNO75882 1429 aa16.98■□□□□ 0.31
SMG8-201ENST00000300917 LETM1O95202 739 aaPredicted RBP16.98■□□□□ 0.31
SMG8-201ENST00000300917 ADCY5O95622 1261 aa16.98■□□□□ 0.31
SMG8-201ENST00000300917 MSNP26038 577 aaKnown RBP16.98■□□□□ 0.31
SMG8-201ENST00000300917 ZNF396Q96N95 335 aaPredicted RBP16.98■□□□□ 0.31
SMG8-201ENST00000300917 TRPC5Q9UL62 973 aaPredicted RBP16.98■□□□□ 0.31
SMG8-201ENST00000300917 ZMYM6O95789 1325 aa16.98■□□□□ 0.31
SMG8-201ENST00000300917 MYH7P12883 1935 aa16.97■□□□□ 0.31
SMG8-201ENST00000300917 ERICH2A1L162 156 aa16.97■□□□□ 0.31
SMG8-201ENST00000300917 ANO6Q4KMQ2 910 aa16.97■□□□□ 0.31
SMG8-201ENST00000300917 SPC24Q8NBT2 197 aa16.97■□□□□ 0.31
SMG8-201ENST00000300917 KCNJ14Q9UNX9 436 aa16.97■□□□□ 0.31
SMG8-201ENST00000300917 LRP5O75197 1615 aa16.97■□□□□ 0.31
SMG8-201ENST00000300917 DIXDC1Q155Q3 683 aa16.97■□□□□ 0.31
SMG8-201ENST00000300917 ALX1Q15699 326 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms