RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 CEBPZQ03701 1054 aaKnown RBP9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 CCDC24Q8N4L8 307 aa9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 ERMNQ8TAM6 284 aa9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 CCDC17Q96LX7 622 aa9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 BCAMP50895 628 aa9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 ZMYM1Q5SVZ6 1142 aa9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 AKNAD1Q5T1N1 836 aa9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 PPP4R3AQ6IN85 833 aa9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 CAVIN1Q6NZI2 390 aaKnown RBP9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 KCNG4Q8TDN1 519 aa9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 AS3MTQ9HBK9 375 aa9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 AATFQ9NY61 560 aaKnown RBP eCLIP9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 SWAP70Q9UH65 585 aa9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 GPR162Q16538 588 aa9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 TBC1D9BQ66K14 1250 aa9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 SUGT1Q9Y2Z0 365 aa9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 UTYO14607 1347 aa9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 SMTNL1A8MU46 457 aa9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 CAVIN2O95810 425 aa9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 ZSCAN22P10073 491 aaPredicted RBP9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 PODNQ7Z5L7 613 aa9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 SKAP1Q86WV1 359 aa9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 SP8Q8IXZ3 490 aa9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 USP40Q9NVE5 1235 aa9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 TMOD4Q9NZQ9 345 aa9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 BCL9O00512 1426 aa9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 CBFA2T2O43439 604 aa9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 PHKA1P46020 1223 aa9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 HSP90AA2PQ14568 343 aaPredicted RBP9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 CALML4Q96GE6 196 aa9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 PUS3Q9BZE2 481 aaKnown RBP9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 NFIXQ14938 502 aa9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 FAM227BQ96M60 508 aa9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 SEC31BQ9NQW1 1179 aa9.57□□□□□ -0.88
SNRPD1-201ENST00000300413 AK2P54819 239 aa9.56□□□□□ -0.88
SNRPD1-201ENST00000300413 DEXIO95424 95 aa9.56□□□□□ -0.88
SNRPD1-201ENST00000300413 FGFR1OPO95684 399 aaKnown RBP9.56□□□□□ -0.88
SNRPD1-201ENST00000300413 MAP3K11Q16584 847 aa9.56□□□□□ -0.88
SNRPD1-201ENST00000300413 PIBF1Q8WXW3 757 aa9.56□□□□□ -0.88
SNRPD1-201ENST00000300413 DHX36Q9H2U1 1008 aaKnown RBP9.56□□□□□ -0.88
SNRPD1-201ENST00000300413 STK24Q9Y6E0 443 aa9.56□□□□□ -0.88
SNRPD1-201ENST00000300413 KDM6AO15550 1401 aaPredicted RBP9.56□□□□□ -0.88
SNRPD1-201ENST00000300413 USP42Q9H9J4 1324 aaKnown RBP9.56□□□□□ -0.88
SNRPD1-201ENST00000300413 NAPAP54920 295 aa9.56□□□□□ -0.88
SNRPD1-201ENST00000300413 PPARAQ07869 468 aa9.56□□□□□ -0.88
SNRPD1-201ENST00000300413 STXBP4Q6ZWJ1 553 aa9.56□□□□□ -0.88
SNRPD1-201ENST00000300413 LINC00116Q8NCU8 138 aa9.56□□□□□ -0.88
SNRPD1-201ENST00000300413 GOPCQ9HD26 462 aa9.56□□□□□ -0.88
SNRPD1-201ENST00000300413 SNX14Q9Y5W7 946 aa9.56□□□□□ -0.88
SNRPD1-201ENST00000300413 TMEM132AQ24JP5 1023 aa9.56□□□□□ -0.88
SNRPD1-201ENST00000300413 GIMAP6Q6P9H5 292 aa9.56□□□□□ -0.88
SNRPD1-201ENST00000300413 ARHGAP27Q6ZUM4 889 aa9.56□□□□□ -0.88
SNRPD1-201ENST00000300413 TXLNBQ8N3L3 684 aa9.56□□□□□ -0.88
SNRPD1-201ENST00000300413 AKAP12Q02952 1782 aa9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 SMARCE1Q969G3 411 aa9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 TAOK3Q9H2K8 898 aa9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 USP17L3A6NCW0 530 aa9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 USP17L4A6NCW7 530 aa9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 ADD2P35612 726 aa9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 USP17L1Q7RTZ2 530 aa9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 IFNL3Q8IZI9 196 aa9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 CCDC82Q8N4S0 544 aa9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 PPP1R12BO60237 982 aaPredicted RBP9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 BTDP43251 543 aa9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 CCDC183Q5T5S1 534 aa9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 FERMT3Q86UX7 667 aa9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 SMARCC2Q8TAQ2 1214 aa9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 DNAI2Q9GZS0 605 aa9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 SPON1Q9HCB6 807 aa9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 SASH1O94885 1247 aa9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 CSF1RP07333 972 aa9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 KRT2P35908 639 aa9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 KCNQ4P56696 695 aa9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 EN1Q05925 392 aaPredicted RBP9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 VAT1LQ9HCJ6 419 aa9.55□□□□□ -0.88
SNRPD1-201ENST00000300413 SPDYE3A6NKU9 549 aa9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 CCP110O43303 1012 aa9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 GSPT1P15170 499 aaKnown RBP9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 STYK1Q6J9G0 422 aa9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 PAXIP1Q6ZW49 1069 aaPredicted RBP9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 ANO10Q9NW15 660 aa9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 MINPP1Q9UNW1 487 aa9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 NFAT5O94916 1531 aa9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 B4E1Z4 1266 aa9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 PLSCR1O15162 318 aa9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 UBA7P41226 1012 aa9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 UBE2HP62256 183 aa9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 PABPC4Q13310 644 aaKnown RBP eCLIP9.54□□□□□ -0.882e-21■■■■□ 21.1
SNRPD1-201ENST00000300413 HEATR3Q7Z4Q2 680 aa9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 TGFBRAP1Q8WUH2 860 aa9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 JAG2Q9Y219 1238 aa9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 MED23Q9ULK4 1368 aa9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 FOXO4P98177 505 aa9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 ITPK1Q13572 414 aa9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 SLC15A2Q16348 729 aa9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 CIAPIN1Q6FI81 312 aa9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 HOMER1Q86YM7 354 aa9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 ZNF274Q96GC6 653 aaPredicted RBP9.54□□□□□ -0.88
SNRPD1-201ENST00000300413 PTPDC1A2A3K4 754 aa9.53□□□□□ -0.88
SNRPD1-201ENST00000300413 TRIM75PA6NK02 468 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms