RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 TSPYL6Q8N831 410 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 KIFC2Q96AC6 838 aa7.82□□□□□ -1.16
GAPVD1-202ENST00000297933 NDC80O14777 642 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 CREB3L3Q68CJ9 461 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 TMX3Q96JJ7 454 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 MAST1Q9Y2H9 1570 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 CCDC66A2RUB6 948 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 NEMFO60524 1076 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 KRT5P13647 590 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 RPS8P62241 208 aaKnown RBP7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 ARID5AQ03989 594 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 DOK7Q18PE1 504 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 HAUS3Q68CZ6 603 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 DHX32Q7L7V1 743 aaKnown RBP7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 FNBP4Q8N3X1 1017 aaPredicted RBP7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 SPATA5Q8NB90 893 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 SELENOOQ9BVL4 669 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 MAK16Q9BXY0 300 aaKnown RBP7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 NBPF3Q9H094 633 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 CCNT1O60563 726 aaKnown RBP7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 VAMP4O75379 141 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 TMCO3Q6UWJ1 677 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 BBXQ8WY36 941 aaPredicted RBP7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 RAD50Q92878 1312 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 ARHGEF35A5YM69 484 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 B4E1Z4 1266 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 GAS8O95995 478 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 HOXB7P09629 217 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 GCKRQ14397 625 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 RASAL2Q9UJF2 1139 aa7.81□□□□□ -1.16
GAPVD1-202ENST00000297933 GOLGA6L9A6NEM1 432 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 UBASH3AP57075 661 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 MFSD14BQ5SR56 506 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 NCAPH2Q6IBW4 605 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 LMBR1Q8WVP7 490 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 TRMT1Q9NXH9 659 aaKnown RBP7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 STX10O60499 249 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 IGHDP01880 384 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 PLCB3Q01970 1234 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 DCAF17Q5H9S7 520 aaPredicted RBP7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 NEK11Q8NG66 645 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 PRKAG2Q9UGJ0 569 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 SPTLC2O15270 562 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 CFBP00751 764 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 EPB41P11171 864 aaKnown RBP7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 ZNF165P49910 485 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 NLRX1Q86UT6 975 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 TMEM94Q12767 1356 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 SHANK2Q9UPX8 1470 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 NR1I2O75469 434 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 CALRP27797 417 aaKnown RBP7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 ADCY7P51828 1080 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 ZNF174Q15697 407 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 PPM1EQ8WY54 764 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 CEP135Q66GS9 1140 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 RAB3IL1Q8TBN0 382 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 CHURC1Q8WUH1 139 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 TMEM87BQ96K49 555 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 MLXIPQ9HAP2 919 aa7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 ABT1Q9ULW3 272 aaKnown RBP7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 ATF5Q9Y2D1 282 aaPredicted RBP7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 NPHP4O75161 1426 aaPredicted RBP7.8□□□□□ -1.16
GAPVD1-202ENST00000297933 NEO1Q92859 1461 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 SHTN1A0MZ66 631 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 PPEF1O14829 653 aaPredicted RBP7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 SKAP1Q86WV1 359 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 KIFAP3Q92845 792 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 IQCGQ9H095 443 aaKnown RBP7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 RTL1A6NKG5 1358 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 CTSWP56202 376 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 SNX16P57768 344 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 ARHGEF16Q5VV41 709 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 MAATS1Q7Z4T9 603 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 NCAPG2Q86XI2 1143 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 PBRM1Q86U86 1689 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 A0A1W2PRG0 241 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 POTEB2H3BUK9 544 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 CAVIN2O95810 425 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 IL13P35225 146 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 PLCD1P51178 756 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 HSP90AA4PQ58FG1 418 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 USPL1Q5W0Q7 1092 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 MAEAQ7L5Y9 396 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 APPBP2Q92624 585 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 GLG1Q92896 1179 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 DEXIO95424 95 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 GNPTABQ3T906 1256 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 CCDC14Q49A88 953 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 RUFY3Q7L099 469 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 LZTS2Q9BRK4 669 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 ATP2A1O14983 1001 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 CALUO43852 315 aaPredicted RBP7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 PRDM1O75626 825 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 OSBPP22059 807 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 RBM10P98175 930 aaKnown RBP7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 CKAP4Q07065 602 aaKnown RBP7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 ARMC9Q7Z3E5 817 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 BRAPQ7Z569 592 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 CCDC155Q8N6L0 562 aa7.79□□□□□ -1.16
GAPVD1-202ENST00000297933 USP25Q9UHP3 1055 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms