RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 LIG3P49916 1009 aa17.02■□□□□ 0.32
SPIDR-201ENST00000297423 RALYLQ86SE5 291 aaKnown RBP17.02■□□□□ 0.32
SPIDR-201ENST00000297423 GPR161Q8N6U8 529 aaKnown RBP17.02■□□□□ 0.32
SPIDR-201ENST00000297423 FBXO18Q8NFZ0 1043 aa17.02■□□□□ 0.32
SPIDR-201ENST00000297423 LINS1Q8NG48 757 aa17.02■□□□□ 0.32
SPIDR-201ENST00000297423 SMARCC1Q92922 1105 aaPredicted RBP17.02■□□□□ 0.32
SPIDR-201ENST00000297423 CCDC85AQ96PX6 553 aaPredicted RBP17.02■□□□□ 0.32
SPIDR-201ENST00000297423 BICC1Q9H694 974 aaKnown RBP17.02■□□□□ 0.32
SPIDR-201ENST00000297423 KAT6BQ8WYB5 2073 aa17.02■□□□□ 0.31
SPIDR-201ENST00000297423 ABCC6O95255 1503 aa17.02■□□□□ 0.31
SPIDR-201ENST00000297423 GOLGA8BA8MQT2 603 aa17.02■□□□□ 0.31
SPIDR-201ENST00000297423 NFXL1Q6ZNB6 911 aa17.02■□□□□ 0.31
SPIDR-201ENST00000297423 NBPF11Q86T75 865 aa17.02■□□□□ 0.31
SPIDR-201ENST00000297423 NGLY1Q96IV0 654 aa17.02■□□□□ 0.31
SPIDR-201ENST00000297423 IVLP07476 585 aa17.01■□□□□ 0.31
SPIDR-201ENST00000297423 SRLQ86TD4 932 aa17.01■□□□□ 0.31
SPIDR-201ENST00000297423 RGS22Q8NE09 1264 aa17.01■□□□□ 0.31
SPIDR-201ENST00000297423 ACBD3Q9H3P7 528 aa17.01■□□□□ 0.31
SPIDR-201ENST00000297423 TFRCP02786 760 aaKnown RBP17.01■□□□□ 0.31
SPIDR-201ENST00000297423 ICE2Q659A1 982 aa17.01■□□□□ 0.31
SPIDR-201ENST00000297423 TTC19Q6DKK2 380 aaPredicted RBP17.01■□□□□ 0.31
SPIDR-201ENST00000297423 CAPZA3Q96KX2 299 aa17.01■□□□□ 0.31
SPIDR-201ENST00000297423 TULP2O00295 520 aa17■□□□□ 0.31
SPIDR-201ENST00000297423 HOOK1Q9UJC3 728 aaKnown RBP17■□□□□ 0.31
SPIDR-201ENST00000297423 LRRC37A3O60309 1634 aa17■□□□□ 0.31
SPIDR-201ENST00000297423 COBLO75128 1261 aa17■□□□□ 0.31
SPIDR-201ENST00000297423 ZMYND10O75800 440 aa17■□□□□ 0.31
SPIDR-201ENST00000297423 RCOR1Q9UKL0 485 aa17■□□□□ 0.31
SPIDR-201ENST00000297423 H3BQF6 201 aa17■□□□□ 0.31
SPIDR-201ENST00000297423 EPB41L2O43491 1005 aaKnown RBP17■□□□□ 0.31
SPIDR-201ENST00000297423 CYP21A2P08686 494 aa17■□□□□ 0.31
SPIDR-201ENST00000297423 MYL5Q02045 173 aa17■□□□□ 0.31
SPIDR-201ENST00000297423 TOGARAM2Q6ZUX3 1019 aa17■□□□□ 0.31
SPIDR-201ENST00000297423 LMO7Q8WWI1 1683 aa17■□□□□ 0.31
SPIDR-201ENST00000297423 PLEKHG2Q9H7P9 1386 aa17■□□□□ 0.31
SPIDR-201ENST00000297423 TRIM29Q14134 588 aa16.99■□□□□ 0.31
SPIDR-201ENST00000297423 DDB1Q16531 1140 aa16.99■□□□□ 0.31
SPIDR-201ENST00000297423 HDXQ7Z353 690 aa16.99■□□□□ 0.31
SPIDR-201ENST00000297423 HMG20BQ9P0W2 317 aa16.99■□□□□ 0.31
SPIDR-201ENST00000297423 SETQ01105 290 aaPredicted RBP16.99■□□□□ 0.31
SPIDR-201ENST00000297423 CLIC6Q96NY7 704 aa16.99■□□□□ 0.31
SPIDR-201ENST00000297423 L2HGDHQ9H9P8 463 aa16.99■□□□□ 0.31
SPIDR-201ENST00000297423 U3KPZ7 1027 aaPredicted RBP16.99■□□□□ 0.31
SPIDR-201ENST00000297423 KLF18A0A0U1RQI7 1052 aa16.99■□□□□ 0.31
SPIDR-201ENST00000297423 EIF3CLB5ME19 914 aaKnown RBP16.99■□□□□ 0.31
SPIDR-201ENST00000297423 NLRP12P59046 1061 aa16.99■□□□□ 0.31
SPIDR-201ENST00000297423 MTF1Q14872 753 aa16.99■□□□□ 0.31
SPIDR-201ENST00000297423 EIF3CQ99613 913 aaKnown RBP16.99■□□□□ 0.31
SPIDR-201ENST00000297423 GRM8O00222 908 aa16.98■□□□□ 0.31
SPIDR-201ENST00000297423 FAM107BQ9H098 131 aa16.98■□□□□ 0.31
SPIDR-201ENST00000297423 TAF5LO75529 589 aa16.98■□□□□ 0.31
SPIDR-201ENST00000297423 STARD3NLO95772 234 aa16.98■□□□□ 0.31
SPIDR-201ENST00000297423 PFKFB1P16118 471 aa16.98■□□□□ 0.31
SPIDR-201ENST00000297423 NSUN7Q8NE18 718 aaKnown RBP16.98■□□□□ 0.31
SPIDR-201ENST00000297423 ATP5J2-PTCD1G3V325 749 aa16.98■□□□□ 0.31
SPIDR-201ENST00000297423 CTR9Q6PD62 1173 aa16.98■□□□□ 0.31
SPIDR-201ENST00000297423 SUCLG2Q96I99 432 aa16.98■□□□□ 0.31
SPIDR-201ENST00000297423 C8orf37Q96NL8 207 aa16.98■□□□□ 0.31
SPIDR-201ENST00000297423 CDCA7Q9BWT1 371 aaPredicted RBP16.98■□□□□ 0.31
SPIDR-201ENST00000297423 PATL2C9JE40 543 aaKnown RBP16.97■□□□□ 0.31
SPIDR-201ENST00000297423 MATR3P43243 847 aaKnown RBP eCLIP16.97■□□□□ 0.312e-6■■■■■ 27.8
SPIDR-201ENST00000297423 MEX3CQ5U5Q3 659 aaKnown RBP16.97■□□□□ 0.31
SPIDR-201ENST00000297423 DHX32Q7L7V1 743 aaKnown RBP16.97■□□□□ 0.31
SPIDR-201ENST00000297423 CRACR2AQ9BSW2 395 aa16.97■□□□□ 0.31
SPIDR-201ENST00000297423 OSBPL5Q9H0X9 879 aaPredicted RBP16.97■□□□□ 0.31
SPIDR-201ENST00000297423 EFCC1Q9HA90 598 aa16.97■□□□□ 0.31
SPIDR-201ENST00000297423 ABCB6Q9NP58 842 aa16.97■□□□□ 0.31
SPIDR-201ENST00000297423 MPHOSPH8Q99549 860 aa16.97■□□□□ 0.31
SPIDR-201ENST00000297423 TEX13AQ9BXU3 409 aaPredicted RBP16.97■□□□□ 0.31
SPIDR-201ENST00000297423 ARHGAP6O43182 974 aa16.97■□□□□ 0.31
SPIDR-201ENST00000297423 GPIHBP1Q8IV16 184 aa16.97■□□□□ 0.31
SPIDR-201ENST00000297423 PARP3Q9Y6F1 533 aa16.97■□□□□ 0.31
SPIDR-201ENST00000297423 FAM204AQ9H8W3 233 aa16.96■□□□□ 0.31
SPIDR-201ENST00000297423 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.96■□□□□ 0.31
SPIDR-201ENST00000297423 ADCY9O60503 1353 aa16.96■□□□□ 0.31
SPIDR-201ENST00000297423 HEG1Q9ULI3 1381 aa16.96■□□□□ 0.31
SPIDR-201ENST00000297423 A1BGP04217 495 aa16.96■□□□□ 0.31
SPIDR-201ENST00000297423 NKX1-1Q15270 411 aaPredicted RBP16.96■□□□□ 0.31
SPIDR-201ENST00000297423 KCNG4Q8TDN1 519 aa16.96■□□□□ 0.31
SPIDR-201ENST00000297423 DBNDD2Q9BQY9 259 aa16.96■□□□□ 0.31
SPIDR-201ENST00000297423 CTAGE15A4D2H0 777 aa16.96■□□□□ 0.31
SPIDR-201ENST00000297423 CCDC175P0C221 793 aa16.96■□□□□ 0.31
SPIDR-201ENST00000297423 CTAGE8P0CG41 777 aa16.96■□□□□ 0.31
SPIDR-201ENST00000297423 TXLNAP40222 546 aa16.96■□□□□ 0.31
SPIDR-201ENST00000297423 TRDNQ13061 729 aa16.96■□□□□ 0.31
SPIDR-201ENST00000297423 CTAGE6Q86UF2 777 aa16.96■□□□□ 0.31
SPIDR-201ENST00000297423 CTAGE4Q8IX94 777 aa16.96■□□□□ 0.31
SPIDR-201ENST00000297423 METTL22Q9BUU2 404 aaPredicted RBP16.96■□□□□ 0.31
SPIDR-201ENST00000297423 NFE2L3Q9Y4A8 694 aa16.96■□□□□ 0.31
SPIDR-201ENST00000297423 A0A0G2JLW4 131 aa16.96■□□□□ 0.3
SPIDR-201ENST00000297423 AFMP43652 599 aa16.96■□□□□ 0.3
SPIDR-201ENST00000297423 TFCP2Q12800 502 aa16.96■□□□□ 0.3
SPIDR-201ENST00000297423 ADALQ6DHV7 355 aa16.96■□□□□ 0.3
SPIDR-201ENST00000297423 EXOC4Q96A65 974 aa16.96■□□□□ 0.3
SPIDR-201ENST00000297423 COL18A1P39060 1754 aa16.95■□□□□ 0.3
SPIDR-201ENST00000297423 MCMDC2Q4G0Z9 681 aa16.95■□□□□ 0.3
SPIDR-201ENST00000297423 MICU3Q86XE3 530 aa16.95■□□□□ 0.3
SPIDR-201ENST00000297423 NOC3LQ8WTT2 800 aaKnown RBP16.95■□□□□ 0.3
SPIDR-201ENST00000297423 PCMTD1Q96MG8 357 aaPredicted RBP16.95■□□□□ 0.3
SPIDR-201ENST00000297423 ZBTB3Q9H5J0 574 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms