RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 GPSM2P81274 684 aa16.53■□□□□ 0.24
ABCF3-201ENST00000292808 ZNF274Q96GC6 653 aaPredicted RBP16.53■□□□□ 0.24
ABCF3-201ENST00000292808 GPR101Q96P66 508 aaPredicted RBP16.53■□□□□ 0.24
ABCF3-201ENST00000292808 NCOA5Q9HCD5 579 aaKnown RBP16.53■□□□□ 0.24
ABCF3-201ENST00000292808 KIAA1551Q9HCM1 1747 aa16.53■□□□□ 0.24
ABCF3-201ENST00000292808 XDHP47989 1333 aa16.53■□□□□ 0.24
ABCF3-201ENST00000292808 NAPBQ9H115 298 aa16.53■□□□□ 0.24
ABCF3-201ENST00000292808 NAP1L2Q9ULW6 460 aaPredicted RBP16.53■□□□□ 0.24
ABCF3-201ENST00000292808 SALL1Q9NSC2 1324 aa16.52■□□□□ 0.24
ABCF3-201ENST00000292808 GNAT2P19087 354 aa16.52■□□□□ 0.24
ABCF3-201ENST00000292808 CCT2P78371 535 aaKnown RBP16.52■□□□□ 0.24
ABCF3-201ENST00000292808 CTDSPL2Q05D32 466 aa16.52■□□□□ 0.24
ABCF3-201ENST00000292808 FAM173BQ6P4H8 233 aa16.52■□□□□ 0.24
ABCF3-201ENST00000292808 RALYLQ86SE5 291 aaKnown RBP16.52■□□□□ 0.24
ABCF3-201ENST00000292808 NSUN4Q96CB9 384 aaKnown RBP16.52■□□□□ 0.24
ABCF3-201ENST00000292808 DDX11Q96FC9 970 aa16.52■□□□□ 0.24
ABCF3-201ENST00000292808 PDLIM2Q96JY6 352 aa16.52■□□□□ 0.24
ABCF3-201ENST00000292808 ANKIB1Q9P2G1 1089 aa16.52■□□□□ 0.24
ABCF3-201ENST00000292808 HPS5Q9UPZ3 1129 aa16.52■□□□□ 0.24
ABCF3-201ENST00000292808 LEMD3Q9Y2U8 911 aa16.52■□□□□ 0.24
ABCF3-201ENST00000292808 CCDC88AQ3V6T2 1871 aa16.52■□□□□ 0.24
ABCF3-201ENST00000292808 COL11A2P13942 1736 aaPredicted RBP16.52■□□□□ 0.23
ABCF3-201ENST00000292808 DYNLL1P63167 89 aaKnown RBP16.52■□□□□ 0.23
ABCF3-201ENST00000292808 LLPHQ9BRT6 129 aaKnown RBP16.52■□□□□ 0.23
ABCF3-201ENST00000292808 JAG2Q9Y219 1238 aa16.52■□□□□ 0.23
ABCF3-201ENST00000292808 BAZ2AQ9UIF9 1905 aaKnown RBP16.51■□□□□ 0.23
ABCF3-201ENST00000292808 MAGEB6P1A0A0J9YX57 407 aa16.51■□□□□ 0.23
ABCF3-201ENST00000292808 B4E1Z4 1266 aa16.51■□□□□ 0.23
ABCF3-201ENST00000292808 CHAF1AQ13111 956 aaPredicted RBP16.51■□□□□ 0.23
ABCF3-201ENST00000292808 HS1BP3Q53T59 392 aa16.51■□□□□ 0.23
ABCF3-201ENST00000292808 POTEAQ6S8J7 498 aa16.51■□□□□ 0.23
ABCF3-201ENST00000292808 KLHL34Q8N239 644 aa16.51■□□□□ 0.23
ABCF3-201ENST00000292808 SDR42E1Q8WUS8 393 aa16.51■□□□□ 0.23
ABCF3-201ENST00000292808 PRDX5P30044 214 aa16.51■□□□□ 0.23
ABCF3-201ENST00000292808 UBE2HP62256 183 aa16.51■□□□□ 0.23
ABCF3-201ENST00000292808 MECOMQ03112 1051 aa16.51■□□□□ 0.23
ABCF3-201ENST00000292808 C15orf52Q6ZUT6 534 aaKnown RBP16.51■□□□□ 0.23
ABCF3-201ENST00000292808 RBM17Q96I25 401 aaKnown RBP16.51■□□□□ 0.23
ABCF3-201ENST00000292808 SMIM22K7EJ46 135 aa16.5■□□□□ 0.23
ABCF3-201ENST00000292808 NAA16Q6N069 864 aaPredicted RBP16.5■□□□□ 0.23
ABCF3-201ENST00000292808 SENP2Q9HC62 589 aa16.5■□□□□ 0.23
ABCF3-201ENST00000292808 PTPDC1A2A3K4 754 aa16.5■□□□□ 0.23
ABCF3-201ENST00000292808 SH2B2O14492 632 aaPredicted RBP16.5■□□□□ 0.23
ABCF3-201ENST00000292808 TDRD7Q8NHU6 1098 aaKnown RBP16.5■□□□□ 0.23
ABCF3-201ENST00000292808 KLF18A0A0U1RQI7 1052 aa16.49■□□□□ 0.23
ABCF3-201ENST00000292808 TDO2P48775 406 aa16.49■□□□□ 0.23
ABCF3-201ENST00000292808 CSPP1Q1MSJ5 1256 aa16.49■□□□□ 0.23
ABCF3-201ENST00000292808 CRAMP1Q96RY5 1269 aa16.49■□□□□ 0.23
ABCF3-201ENST00000292808 HMGB2P26583 209 aaKnown RBP16.48■□□□□ 0.23
ABCF3-201ENST00000292808 TRDNQ13061 729 aa16.48■□□□□ 0.23
ABCF3-201ENST00000292808 AKNAD1Q5T1N1 836 aa16.48■□□□□ 0.23
ABCF3-201ENST00000292808 NLGN1Q8N2Q7 840 aa16.48■□□□□ 0.23
ABCF3-201ENST00000292808 FOSBP53539 338 aa16.48■□□□□ 0.23
ABCF3-201ENST00000292808 RAB11FIP4Q86YS3 637 aa16.48■□□□□ 0.23
ABCF3-201ENST00000292808 FAM184AQ8NB25 1140 aa16.48■□□□□ 0.23
ABCF3-201ENST00000292808 IGDCC4Q8TDY8 1250 aa16.48■□□□□ 0.23
ABCF3-201ENST00000292808 NACAP1Q9BZK3 213 aa16.48■□□□□ 0.23
ABCF3-201ENST00000292808 TSPY26PQ9H489 355 aa16.48■□□□□ 0.23
ABCF3-201ENST00000292808 PPFIA3O75145 1194 aa16.47■□□□□ 0.23
ABCF3-201ENST00000292808 BBOX1O75936 387 aa16.47■□□□□ 0.23
ABCF3-201ENST00000292808 LETM1O95202 739 aaPredicted RBP16.47■□□□□ 0.23
ABCF3-201ENST00000292808 FDPSP14324 419 aaKnown RBP16.47■□□□□ 0.23
ABCF3-201ENST00000292808 GRIK5Q16478 980 aa16.47■□□□□ 0.23
ABCF3-201ENST00000292808 RNF214Q8ND24 703 aa16.47■□□□□ 0.23
ABCF3-201ENST00000292808 STAG1Q8WVM7 1258 aa16.47■□□□□ 0.23
ABCF3-201ENST00000292808 ANGEL1Q9UNK9 670 aaKnown RBP16.47■□□□□ 0.23
ABCF3-201ENST00000292808 GOLGA8BA8MQT2 603 aa16.47■□□□□ 0.23
ABCF3-201ENST00000292808 UFL1O94874 794 aa16.47■□□□□ 0.23
ABCF3-201ENST00000292808 KRT85P78386 507 aa16.47■□□□□ 0.23
ABCF3-201ENST00000292808 CCDC183Q5T5S1 534 aa16.47■□□□□ 0.23
ABCF3-201ENST00000292808 PODXL2Q9NZ53 605 aa16.47■□□□□ 0.23
ABCF3-201ENST00000292808 TFIP11Q9UBB9 837 aaKnown RBP16.47■□□□□ 0.23
ABCF3-201ENST00000292808 DUOX1Q9NRD9 1551 aa16.47■□□□□ 0.23
ABCF3-201ENST00000292808 LAMB1P07942 1786 aa16.47■□□□□ 0.23
ABCF3-201ENST00000292808 MYH15Q9Y2K3 1946 aa16.47■□□□□ 0.23
ABCF3-201ENST00000292808 H3BQV1 296 aa16.46■□□□□ 0.23
ABCF3-201ENST00000292808 PPARAQ07869 468 aa16.46■□□□□ 0.23
ABCF3-201ENST00000292808 IFFO2Q5TF58 517 aa16.46■□□□□ 0.23
ABCF3-201ENST00000292808 ZSCAN30Q86W11 494 aa16.46■□□□□ 0.23
ABCF3-201ENST00000292808 BRIP1Q9BX63 1249 aa16.46■□□□□ 0.23
ABCF3-201ENST00000292808 ZSWIM5Q9P217 1185 aa16.46■□□□□ 0.23
ABCF3-201ENST00000292808 POLLQ9UGP5 575 aa16.46■□□□□ 0.23
ABCF3-201ENST00000292808 KDM4AO75164 1064 aa16.46■□□□□ 0.23
ABCF3-201ENST00000292808 MMP10P09238 476 aa16.46■□□□□ 0.23
ABCF3-201ENST00000292808 ATP2B4P23634 1241 aa16.46■□□□□ 0.23
ABCF3-201ENST00000292808 LY9Q9HBG7 655 aa16.46■□□□□ 0.23
ABCF3-201ENST00000292808 ANO8Q9HCE9 1232 aaPredicted RBP16.46■□□□□ 0.23
ABCF3-201ENST00000292808 ANAPC4Q9UJX5 808 aa16.46■□□□□ 0.23
ABCF3-201ENST00000292808 ECM29Q5VYK3 1845 aa16.46■□□□□ 0.23
ABCF3-201ENST00000292808 RESTQ13127 1097 aa16.45■□□□□ 0.22
ABCF3-201ENST00000292808 TTC6Q86TZ1 520 aa16.45■□□□□ 0.22
ABCF3-201ENST00000292808 TBC1D16Q8TBP0 767 aa16.45■□□□□ 0.22
ABCF3-201ENST00000292808 GGA1Q9UJY5 639 aa16.45■□□□□ 0.22
ABCF3-201ENST00000292808 CYP2D7A0A087X1C5 515 aa16.45■□□□□ 0.22
ABCF3-201ENST00000292808 SRGNP10124 158 aa16.45■□□□□ 0.22
ABCF3-201ENST00000292808 HMGN5P82970 282 aaKnown RBP16.45■□□□□ 0.22
ABCF3-201ENST00000292808 EVX2Q03828 476 aa16.45■□□□□ 0.22
ABCF3-201ENST00000292808 MFSD6Q6ZSS7 791 aa16.45■□□□□ 0.22
ABCF3-201ENST00000292808 ZNF804AQ7Z570 1209 aa16.45■□□□□ 0.22
ABCF3-201ENST00000292808 FLAD1Q8NFF5 587 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms